data_7I17
#
_model_server_result.job_id            zUvJiRWDlJdZJZtWpsOUeg 
_model_server_result.datetime_utc      '2025-06-18 09:15:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7i17 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    7I17 
#
_exptl.entry_id    7I17 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7I17 
_cell.length_a            67.89 
_cell.length_b            99.84 
_cell.length_c            103.65 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7I17 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O ASN 221 B ASN 221 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? 
metalc ? metalc2 B OD1 ASN 221 B ASN 221 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc3 B O PHE 223 B PHE 223 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? 
metalc ? metalc4 B O ASP 263 B ASP 263 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.034 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7I17 
_atom_sites.fract_transf_matrix[1][1]    0.01473 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010016 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009648 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CL A 1 401 410 CL CL . 
D 3 TJV A 1 402 501 TJV LIG . 
E 4 DMS A 1 403 601 DMS DMS . 
F 5 NA B 1 401 406 NA NA . 
G 4 DMS B 1 402 501 DMS DMS . 
H 6 HOH A 1 501 92 HOH HOH . 
H 6 HOH A 2 502 96 HOH HOH . 
H 6 HOH A 3 503 87 HOH HOH . 
H 6 HOH A 4 504 73 HOH HOH . 
H 6 HOH A 5 505 112 HOH HOH . 
H 6 HOH A 6 506 115 HOH HOH . 
H 6 HOH A 7 507 65 HOH HOH . 
H 6 HOH A 8 508 108 HOH HOH . 
H 6 HOH A 9 509 28 HOH HOH . 
H 6 HOH A 10 510 124 HOH HOH . 
H 6 HOH A 11 511 45 HOH HOH . 
H 6 HOH A 12 512 82 HOH HOH . 
H 6 HOH A 13 513 103 HOH HOH . 
H 6 HOH A 14 514 43 HOH HOH . 
H 6 HOH A 15 515 20 HOH HOH . 
H 6 HOH A 16 516 34 HOH HOH . 
H 6 HOH A 17 517 15 HOH HOH . 
H 6 HOH A 18 518 84 HOH HOH . 
H 6 HOH A 19 519 23 HOH HOH . 
H 6 HOH A 20 520 30 HOH HOH . 
H 6 HOH A 21 521 100 HOH HOH . 
H 6 HOH A 22 522 101 HOH HOH . 
H 6 HOH A 23 523 39 HOH HOH . 
H 6 HOH A 24 524 44 HOH HOH . 
H 6 HOH A 25 525 18 HOH HOH . 
H 6 HOH A 26 526 98 HOH HOH . 
H 6 HOH A 27 527 5 HOH HOH . 
H 6 HOH A 28 528 109 HOH HOH . 
H 6 HOH A 29 529 6 HOH HOH . 
H 6 HOH A 30 530 99 HOH HOH . 
H 6 HOH A 31 531 2 HOH HOH . 
H 6 HOH A 32 532 4 HOH HOH . 
H 6 HOH A 33 533 123 HOH HOH . 
H 6 HOH A 34 534 52 HOH HOH . 
H 6 HOH A 35 535 8 HOH HOH . 
H 6 HOH A 36 536 89 HOH HOH . 
H 6 HOH A 37 537 48 HOH HOH . 
H 6 HOH A 38 538 37 HOH HOH . 
H 6 HOH A 39 539 31 HOH HOH . 
H 6 HOH A 40 540 32 HOH HOH . 
H 6 HOH A 41 541 17 HOH HOH . 
H 6 HOH A 42 542 61 HOH HOH . 
H 6 HOH A 43 543 57 HOH HOH . 
H 6 HOH A 44 544 27 HOH HOH . 
H 6 HOH A 45 545 80 HOH HOH . 
H 6 HOH A 46 546 77 HOH HOH . 
H 6 HOH A 47 547 56 HOH HOH . 
H 6 HOH A 48 548 25 HOH HOH . 
H 6 HOH A 49 549 12 HOH HOH . 
H 6 HOH A 50 550 49 HOH HOH . 
H 6 HOH A 51 551 42 HOH HOH . 
H 6 HOH A 52 552 70 HOH HOH . 
H 6 HOH A 53 553 60 HOH HOH . 
H 6 HOH A 54 554 35 HOH HOH . 
H 6 HOH A 55 555 21 HOH HOH . 
H 6 HOH A 56 556 38 HOH HOH . 
H 6 HOH A 57 557 13 HOH HOH . 
H 6 HOH A 58 558 54 HOH HOH . 
H 6 HOH A 59 559 76 HOH HOH . 
H 6 HOH A 60 560 97 HOH HOH . 
H 6 HOH A 61 561 91 HOH HOH . 
H 6 HOH A 62 562 116 HOH HOH . 
H 6 HOH A 63 563 47 HOH HOH . 
H 6 HOH A 64 564 111 HOH HOH . 
H 6 HOH A 65 565 118 HOH HOH . 
H 6 HOH A 66 566 46 HOH HOH . 
H 6 HOH A 67 567 63 HOH HOH . 
H 6 HOH A 68 568 78 HOH HOH . 
H 6 HOH A 69 569 102 HOH HOH . 
H 6 HOH A 70 570 117 HOH HOH . 
H 6 HOH A 71 571 40 HOH HOH . 
H 6 HOH A 72 572 64 HOH HOH . 
H 6 HOH A 73 573 114 HOH HOH . 
H 6 HOH A 74 574 81 HOH HOH . 
H 6 HOH A 75 575 86 HOH HOH . 
H 6 HOH A 76 576 59 HOH HOH . 
I 6 HOH B 1 501 93 HOH HOH . 
I 6 HOH B 2 502 122 HOH HOH . 
I 6 HOH B 3 503 14 HOH HOH . 
I 6 HOH B 4 504 68 HOH HOH . 
I 6 HOH B 5 505 74 HOH HOH . 
I 6 HOH B 6 506 55 HOH HOH . 
I 6 HOH B 7 507 7 HOH HOH . 
I 6 HOH B 8 508 110 HOH HOH . 
I 6 HOH B 9 509 90 HOH HOH . 
I 6 HOH B 10 510 11 HOH HOH . 
I 6 HOH B 11 511 66 HOH HOH . 
I 6 HOH B 12 512 95 HOH HOH . 
I 6 HOH B 13 513 10 HOH HOH . 
I 6 HOH B 14 514 105 HOH HOH . 
I 6 HOH B 15 515 58 HOH HOH . 
I 6 HOH B 16 516 19 HOH HOH . 
I 6 HOH B 17 517 3 HOH HOH . 
I 6 HOH B 18 518 75 HOH HOH . 
I 6 HOH B 19 519 22 HOH HOH . 
I 6 HOH B 20 520 71 HOH HOH . 
I 6 HOH B 21 521 83 HOH HOH . 
I 6 HOH B 22 522 33 HOH HOH . 
I 6 HOH B 23 523 29 HOH HOH . 
I 6 HOH B 24 524 67 HOH HOH . 
I 6 HOH B 25 525 106 HOH HOH . 
I 6 HOH B 26 526 85 HOH HOH . 
I 6 HOH B 27 527 125 HOH HOH . 
I 6 HOH B 28 528 9 HOH HOH . 
I 6 HOH B 29 529 26 HOH HOH . 
I 6 HOH B 30 530 53 HOH HOH . 
I 6 HOH B 31 531 41 HOH HOH . 
I 6 HOH B 32 532 119 HOH HOH . 
I 6 HOH B 33 533 24 HOH HOH . 
I 6 HOH B 34 534 72 HOH HOH . 
I 6 HOH B 35 535 104 HOH HOH . 
I 6 HOH B 36 536 107 HOH HOH . 
I 6 HOH B 37 537 50 HOH HOH . 
I 6 HOH B 38 538 16 HOH HOH . 
I 6 HOH B 39 539 88 HOH HOH . 
I 6 HOH B 40 540 120 HOH HOH . 
I 6 HOH B 41 541 62 HOH HOH . 
I 6 HOH B 42 542 79 HOH HOH . 
I 6 HOH B 43 543 69 HOH HOH . 
I 6 HOH B 44 544 51 HOH HOH . 
I 6 HOH B 45 545 113 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -2.149 
_atom_site.Cartn_y               27.826 
_atom_site.Cartn_z               -21.89 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        46.07 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#