data_7I1D # _model_server_result.job_id BoAzrhTtRveYompv9N6Iig _model_server_result.datetime_utc '2025-08-04 01:59:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7i1d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 7I1D # _exptl.entry_id 7I1D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.219 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(4-bromo-3-methylphenyl)methyl]-2-(methylsulfonyl)ethan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7I1D _cell.length_a 67.96 _cell.length_b 99.47 _cell.length_c 103.93 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7I1D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 117 B CYS 117 1_555 B SG CYS 145 B CYS 145 1_555 ? C ? ? C ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 B SG CYS 117 B CYS 117 1_555 B SG CYS 145 B CYS 145 1_555 ? D ? ? D ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 B O ASN 221 B ASN 221 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc2 B OD1 ASN 221 B ASN 221 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc3 B O PHE 223 B PHE 223 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc4 B O ASP 263 B ASP 263 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc5 B OD1 ASP 263 B ASP 263 1_555 F NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? # _chem_comp.formula 'C11 H16 Br N O2 S' _chem_comp.formula_weight 306.219 _chem_comp.id RB7 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(4-bromo-3-methylphenyl)methyl]-2-(methylsulfonyl)ethan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 S RB7 sing 286 n n O S RB7 doub 287 n n S C9 RB7 sing 288 n n S O1 RB7 doub 289 n n C9 C8 RB7 sing 290 n n C8 N RB7 sing 291 n n N C7 RB7 sing 292 n n C C1 RB7 sing 293 n n C2 C1 RB7 doub 294 n y C2 C3 RB7 sing 295 n y C1 C6 RB7 sing 296 n y C7 C3 RB7 sing 297 n n C3 C4 RB7 doub 298 n y C6 BR RB7 sing 299 n n C6 C5 RB7 doub 300 n y C4 C5 RB7 sing 301 n y C4 H1 RB7 sing 302 n n C5 H2 RB7 sing 303 n n C7 H3 RB7 sing 304 n n C7 H4 RB7 sing 305 n n C8 H5 RB7 sing 306 n n C8 H6 RB7 sing 307 n n C9 H7 RB7 sing 308 n n C9 H8 RB7 sing 309 n n C10 H9 RB7 sing 310 n n C10 H10 RB7 sing 311 n n C10 H11 RB7 sing 312 n n N H12 RB7 sing 313 n n C2 H14 RB7 sing 314 n n C H15 RB7 sing 315 n n C H16 RB7 sing 316 n n C H17 RB7 sing 317 n n # _atom_sites.entry_id 7I1D _atom_sites.fract_transf_matrix[1][1] 0.014715 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010053 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009622 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 401 410 CL CL . D 3 RB7 A 1 402 501 RB7 LIG . E 4 DMS A 1 403 601 DMS DMS . F 5 NA B 1 401 406 NA NA . G 6 HOH A 1 501 39 HOH HOH . G 6 HOH A 2 502 58 HOH HOH . G 6 HOH A 3 503 28 HOH HOH . G 6 HOH A 4 504 27 HOH HOH . G 6 HOH A 5 505 51 HOH HOH . G 6 HOH A 6 506 63 HOH HOH . G 6 HOH A 7 507 29 HOH HOH . G 6 HOH A 8 508 50 HOH HOH . G 6 HOH A 9 509 48 HOH HOH . G 6 HOH A 10 510 25 HOH HOH . G 6 HOH A 11 511 62 HOH HOH . G 6 HOH A 12 512 42 HOH HOH . G 6 HOH A 13 513 61 HOH HOH . G 6 HOH A 14 514 7 HOH HOH . G 6 HOH A 15 515 14 HOH HOH . G 6 HOH A 16 516 24 HOH HOH . G 6 HOH A 17 517 37 HOH HOH . G 6 HOH A 18 518 53 HOH HOH . G 6 HOH A 19 519 5 HOH HOH . G 6 HOH A 20 520 57 HOH HOH . G 6 HOH A 21 521 30 HOH HOH . G 6 HOH A 22 522 33 HOH HOH . G 6 HOH A 23 523 4 HOH HOH . G 6 HOH A 24 524 10 HOH HOH . G 6 HOH A 25 525 47 HOH HOH . G 6 HOH A 26 526 22 HOH HOH . G 6 HOH A 27 527 32 HOH HOH . G 6 HOH A 28 528 17 HOH HOH . G 6 HOH A 29 529 18 HOH HOH . G 6 HOH A 30 530 2 HOH HOH . G 6 HOH A 31 531 41 HOH HOH . G 6 HOH A 32 532 11 HOH HOH . G 6 HOH A 33 533 59 HOH HOH . G 6 HOH A 34 534 46 HOH HOH . G 6 HOH A 35 535 34 HOH HOH . G 6 HOH A 36 536 12 HOH HOH . G 6 HOH A 37 537 54 HOH HOH . G 6 HOH A 38 538 52 HOH HOH . H 6 HOH B 1 501 49 HOH HOH . H 6 HOH B 2 502 40 HOH HOH . H 6 HOH B 3 503 36 HOH HOH . H 6 HOH B 4 504 6 HOH HOH . H 6 HOH B 5 505 21 HOH HOH . H 6 HOH B 6 506 13 HOH HOH . H 6 HOH B 7 507 26 HOH HOH . H 6 HOH B 8 508 43 HOH HOH . H 6 HOH B 9 509 16 HOH HOH . H 6 HOH B 10 510 35 HOH HOH . H 6 HOH B 11 511 20 HOH HOH . H 6 HOH B 12 512 8 HOH HOH . H 6 HOH B 13 513 60 HOH HOH . H 6 HOH B 14 514 9 HOH HOH . H 6 HOH B 15 515 56 HOH HOH . H 6 HOH B 16 516 3 HOH HOH . H 6 HOH B 17 517 23 HOH HOH . H 6 HOH B 18 518 55 HOH HOH . H 6 HOH B 19 519 15 HOH HOH . H 6 HOH B 20 520 45 HOH HOH . H 6 HOH B 21 521 31 HOH HOH . H 6 HOH B 22 522 38 HOH HOH . H 6 HOH B 23 523 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 RB7 . C . D 3 24.95 3.76 -28.732 0.3 42.88 ? C4 RB7 402 A 1 HETATM 2 C C4 RB7 . D . D 3 24.95 3.76 -28.731 0.3 42.88 ? C4 RB7 402 A 1 HETATM 3 C C5 RB7 . C . D 3 23.948 3.159 -29.536 0.3 40.56 ? C5 RB7 402 A 1 HETATM 4 C C5 RB7 . D . D 3 23.948 3.159 -29.536 0.3 40.56 ? C5 RB7 402 A 1 HETATM 5 C C6 RB7 . C . D 3 24.325 2.634 -30.791 0.3 40.41 ? C6 RB7 402 A 1 HETATM 6 C C6 RB7 . D . D 3 24.325 2.634 -30.791 0.3 40.41 ? C6 RB7 402 A 1 HETATM 7 C C7 RB7 . C . D 3 27.444 4.523 -28.304 0.3 48.47 ? C7 RB7 402 A 1 HETATM 8 C C7 RB7 . D . D 3 27.444 4.523 -28.304 0.3 48.47 ? C7 RB7 402 A 1 HETATM 9 C C8 RB7 . C . D 3 26.224 6.292 -26.825 0.3 59.33 ? C8 RB7 402 A 1 HETATM 10 C C8 RB7 . D . D 3 26.224 6.292 -26.825 0.3 59.33 ? C8 RB7 402 A 1 HETATM 11 C C9 RB7 . C . D 3 26.979 7.472 -26.11 0.3 62.64 ? C9 RB7 402 A 1 HETATM 12 C C9 RB7 . D . D 3 26.979 7.472 -26.11 0.3 62.64 ? C9 RB7 402 A 1 HETATM 13 C C10 RB7 . C . D 3 29.897 7.976 -26.096 0.3 65.51 ? C10 RB7 402 A 1 HETATM 14 C C10 RB7 . D . D 3 29.897 7.976 -26.096 0.3 65.51 ? C10 RB7 402 A 1 HETATM 15 O O1 RB7 . C . D 3 28.836 5.57 -25.696 0.3 69.09 ? O1 RB7 402 A 1 HETATM 16 O O1 RB7 . D . D 3 28.836 5.57 -25.696 0.3 69.09 ? O1 RB7 402 A 1 HETATM 17 S S RB7 . C . D 3 28.594 6.96 -25.415 0.3 68.82 ? S RB7 402 A 1 HETATM 18 S S RB7 . D . D 3 28.594 6.96 -25.415 0.3 68.82 ? S RB7 402 A 1 HETATM 19 O O RB7 . C . D 3 28.564 7.041 -23.975 0.3 70.42 ? O RB7 402 A 1 HETATM 20 O O RB7 . D . D 3 28.564 7.041 -23.975 0.3 70.42 ? O RB7 402 A 1 HETATM 21 N N RB7 . C . D 3 27.005 4.957 -26.9 0.3 54.67 ? N RB7 402 A 1 HETATM 22 N N RB7 . D . D 3 27.005 4.957 -26.9 0.3 54.67 ? N RB7 402 A 1 HETATM 23 C C3 RB7 . C . D 3 26.314 3.85 -29.186 0.3 44.93 ? C3 RB7 402 A 1 HETATM 24 C C3 RB7 . D . D 3 26.314 3.85 -29.186 0.3 44.93 ? C3 RB7 402 A 1 HETATM 25 C C2 RB7 . C . D 3 26.627 3.302 -30.473 0.3 41.85 ? C2 RB7 402 A 1 HETATM 26 C C2 RB7 . D . D 3 26.627 3.302 -30.473 0.3 41.85 ? C2 RB7 402 A 1 HETATM 27 BR BR RB7 . C . D 3 22.924 1.803 -31.855 0.3 42.66 ? BR RB7 402 A 1 HETATM 28 BR BR RB7 . D . D 3 22.924 1.803 -31.855 0.3 42.66 ? BR RB7 402 A 1 HETATM 29 C C1 RB7 . C . D 3 25.653 2.69 -31.292 0.3 37.48 ? C1 RB7 402 A 1 HETATM 30 C C1 RB7 . D . D 3 25.653 2.69 -31.292 0.3 37.48 ? C1 RB7 402 A 1 HETATM 31 C C RB7 . C . D 3 26.033 2.138 -32.601 0.3 34.35 ? C RB7 402 A 1 HETATM 32 C C RB7 . D . D 3 26.033 2.138 -32.601 0.3 34.35 ? C RB7 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #