data_7I74 # _model_server_result.job_id L-pRGoOJ-iFmSi_5k3O5Pg _model_server_result.datetime_utc '2025-07-06 21:16:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7i74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7I74 # _exptl.entry_id 7I74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.34 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S)-1-[(S)-(1-methyl-1H-imidazol-2-yl)(phenyl)methyl]-5-oxopyrrolidine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.29 _cell.angle_gamma 90 _cell.entry_id 7I74 _cell.length_a 88.376 _cell.length_b 58.463 _cell.length_c 32.703 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7I74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 50 A CYS 56 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc2 A SG CYS 52 A CYS 58 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc3 A SG CYS 110 A CYS 116 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc4 A ND1 HIS 112 A HIS 118 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? # _chem_comp.formula 'C16 H18 N4 O2' _chem_comp.formula_weight 298.34 _chem_comp.id A1B5E _chem_comp.mon_nstd_flag . _chem_comp.name (3S)-1-[(S)-(1-methyl-1H-imidazol-2-yl)(phenyl)methyl]-5-oxopyrrolidine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N A1B5E sing 1 n n N C1 A1B5E sing 2 n y C1 C2 A1B5E doub 3 n y C2 N1 A1B5E sing 4 n y N1 C3 A1B5E doub 5 n y N C3 A1B5E sing 6 n y C3 C4 A1B5E sing 7 n n C5 C4 A1B5E sing 8 n n C5 C6 A1B5E sing 9 n y C6 C7 A1B5E doub 10 n y C7 C8 A1B5E sing 11 n y C8 C9 A1B5E doub 12 n y C9 C10 A1B5E sing 13 n y C10 C5 A1B5E doub 14 n y C4 N2 A1B5E sing 15 n n N2 C11 A1B5E sing 16 n n C11 C12 A1B5E sing 17 n n C13 C12 A1B5E sing 18 n n N3 C13 A1B5E sing 19 n n O C13 A1B5E doub 20 n n C12 C14 A1B5E sing 21 n n C14 C15 A1B5E sing 22 n n N2 C15 A1B5E sing 23 n n C15 O1 A1B5E doub 24 n n N3 H15 A1B5E sing 25 n n N3 H14 A1B5E sing 26 n n C4 H A1B5E sing 27 n n C6 H7 A1B5E sing 28 n n C7 H8 A1B5E sing 29 n n C8 H9 A1B5E sing 30 n n C10 H11 A1B5E sing 31 n n C14 H16 A1B5E sing 32 n n C14 H17 A1B5E sing 33 n n C12 H1 A1B5E sing 34 n n C11 H13 A1B5E sing 35 n n C11 H12 A1B5E sing 36 n n C2 H6 A1B5E sing 37 n n C1 H5 A1B5E sing 38 n n C H3 A1B5E sing 39 n n C H2 A1B5E sing 40 n n C H4 A1B5E sing 41 n n C9 H10 A1B5E sing 42 n n # _atom_sites.entry_id 7I74 _atom_sites.fract_transf_matrix[1][1] 0.011315 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000452 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017105 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030603 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1B5E A 1 201 201 A1B5E LIG . C 3 GOL A 1 202 202 GOL GOL . D 4 ZN A 1 203 1 ZN ZN . E 5 DMS A 1 204 1 DMS DMS . F 6 HOH A 1 301 229 HOH HOH . F 6 HOH A 2 302 59 HOH HOH . F 6 HOH A 3 303 137 HOH HOH . F 6 HOH A 4 304 234 HOH HOH . F 6 HOH A 5 305 262 HOH HOH . F 6 HOH A 6 306 4 HOH HOH . F 6 HOH A 7 307 34 HOH HOH . F 6 HOH A 8 308 42 HOH HOH . F 6 HOH A 9 309 30 HOH HOH . F 6 HOH A 10 310 275 HOH HOH . F 6 HOH A 11 311 177 HOH HOH . F 6 HOH A 12 312 288 HOH HOH . F 6 HOH A 13 313 36 HOH HOH . F 6 HOH A 14 314 24 HOH HOH . F 6 HOH A 15 315 16 HOH HOH . F 6 HOH A 16 316 278 HOH HOH . F 6 HOH A 17 317 263 HOH HOH . F 6 HOH A 18 318 211 HOH HOH . F 6 HOH A 19 319 121 HOH HOH . F 6 HOH A 20 320 147 HOH HOH . F 6 HOH A 21 321 253 HOH HOH . F 6 HOH A 22 322 252 HOH HOH . F 6 HOH A 23 323 280 HOH HOH . F 6 HOH A 24 324 77 HOH HOH . F 6 HOH A 25 325 289 HOH HOH . F 6 HOH A 26 326 111 HOH HOH . F 6 HOH A 27 327 272 HOH HOH . F 6 HOH A 28 328 266 HOH HOH . F 6 HOH A 29 329 25 HOH HOH . F 6 HOH A 30 330 7 HOH HOH . F 6 HOH A 31 331 68 HOH HOH . F 6 HOH A 32 332 104 HOH HOH . F 6 HOH A 33 333 171 HOH HOH . F 6 HOH A 34 334 254 HOH HOH . F 6 HOH A 35 335 33 HOH HOH . F 6 HOH A 36 336 107 HOH HOH . F 6 HOH A 37 337 85 HOH HOH . F 6 HOH A 38 338 9 HOH HOH . F 6 HOH A 39 339 169 HOH HOH . F 6 HOH A 40 340 26 HOH HOH . F 6 HOH A 41 341 13 HOH HOH . F 6 HOH A 42 342 28 HOH HOH . F 6 HOH A 43 343 174 HOH HOH . F 6 HOH A 44 344 2 HOH HOH . F 6 HOH A 45 345 267 HOH HOH . F 6 HOH A 46 346 259 HOH HOH . F 6 HOH A 47 347 212 HOH HOH . F 6 HOH A 48 348 43 HOH HOH . F 6 HOH A 49 349 35 HOH HOH . F 6 HOH A 50 350 12 HOH HOH . F 6 HOH A 51 351 29 HOH HOH . F 6 HOH A 52 352 60 HOH HOH . F 6 HOH A 53 353 21 HOH HOH . F 6 HOH A 54 354 119 HOH HOH . F 6 HOH A 55 355 37 HOH HOH . F 6 HOH A 56 356 264 HOH HOH . F 6 HOH A 57 357 161 HOH HOH . F 6 HOH A 58 358 126 HOH HOH . F 6 HOH A 59 359 214 HOH HOH . F 6 HOH A 60 360 180 HOH HOH . F 6 HOH A 61 361 50 HOH HOH . F 6 HOH A 62 362 283 HOH HOH . F 6 HOH A 63 363 105 HOH HOH . F 6 HOH A 64 364 256 HOH HOH . F 6 HOH A 65 365 270 HOH HOH . F 6 HOH A 66 366 84 HOH HOH . F 6 HOH A 67 367 220 HOH HOH . F 6 HOH A 68 368 57 HOH HOH . F 6 HOH A 69 369 62 HOH HOH . F 6 HOH A 70 370 46 HOH HOH . F 6 HOH A 71 371 255 HOH HOH . F 6 HOH A 72 372 124 HOH HOH . F 6 HOH A 73 373 93 HOH HOH . F 6 HOH A 74 374 100 HOH HOH . F 6 HOH A 75 375 47 HOH HOH . F 6 HOH A 76 376 276 HOH HOH . F 6 HOH A 77 377 182 HOH HOH . F 6 HOH A 78 378 116 HOH HOH . F 6 HOH A 79 379 11 HOH HOH . F 6 HOH A 80 380 75 HOH HOH . F 6 HOH A 81 381 258 HOH HOH . F 6 HOH A 82 382 58 HOH HOH . F 6 HOH A 83 383 5 HOH HOH . F 6 HOH A 84 384 8 HOH HOH . F 6 HOH A 85 385 219 HOH HOH . F 6 HOH A 86 386 39 HOH HOH . F 6 HOH A 87 387 15 HOH HOH . F 6 HOH A 88 388 20 HOH HOH . F 6 HOH A 89 389 248 HOH HOH . F 6 HOH A 90 390 96 HOH HOH . F 6 HOH A 91 391 204 HOH HOH . F 6 HOH A 92 392 168 HOH HOH . F 6 HOH A 93 393 103 HOH HOH . F 6 HOH A 94 394 284 HOH HOH . F 6 HOH A 95 395 260 HOH HOH . F 6 HOH A 96 396 215 HOH HOH . F 6 HOH A 97 397 27 HOH HOH . F 6 HOH A 98 398 144 HOH HOH . F 6 HOH A 99 399 23 HOH HOH . F 6 HOH A 100 400 106 HOH HOH . F 6 HOH A 101 401 80 HOH HOH . F 6 HOH A 102 402 131 HOH HOH . F 6 HOH A 103 403 40 HOH HOH . F 6 HOH A 104 404 95 HOH HOH . F 6 HOH A 105 405 79 HOH HOH . F 6 HOH A 106 406 251 HOH HOH . F 6 HOH A 107 407 261 HOH HOH . F 6 HOH A 108 408 269 HOH HOH . F 6 HOH A 109 409 102 HOH HOH . F 6 HOH A 110 410 277 HOH HOH . F 6 HOH A 111 411 89 HOH HOH . F 6 HOH A 112 412 48 HOH HOH . F 6 HOH A 113 413 83 HOH HOH . F 6 HOH A 114 414 10 HOH HOH . F 6 HOH A 115 415 271 HOH HOH . F 6 HOH A 116 416 175 HOH HOH . F 6 HOH A 117 417 123 HOH HOH . F 6 HOH A 118 418 38 HOH HOH . F 6 HOH A 119 419 268 HOH HOH . F 6 HOH A 120 420 132 HOH HOH . F 6 HOH A 121 421 101 HOH HOH . F 6 HOH A 122 422 129 HOH HOH . F 6 HOH A 123 423 265 HOH HOH . F 6 HOH A 124 424 76 HOH HOH . F 6 HOH A 125 425 236 HOH HOH . F 6 HOH A 126 426 279 HOH HOH . F 6 HOH A 127 427 155 HOH HOH . F 6 HOH A 128 428 156 HOH HOH . F 6 HOH A 129 429 192 HOH HOH . F 6 HOH A 130 430 114 HOH HOH . F 6 HOH A 131 431 118 HOH HOH . F 6 HOH A 132 432 285 HOH HOH . F 6 HOH A 133 433 158 HOH HOH . F 6 HOH A 134 434 61 HOH HOH . F 6 HOH A 135 435 69 HOH HOH . F 6 HOH A 136 436 213 HOH HOH . F 6 HOH A 137 437 287 HOH HOH . F 6 HOH A 138 438 152 HOH HOH . F 6 HOH A 139 439 257 HOH HOH . F 6 HOH A 140 440 224 HOH HOH . F 6 HOH A 141 441 65 HOH HOH . F 6 HOH A 142 442 240 HOH HOH . F 6 HOH A 143 443 281 HOH HOH . F 6 HOH A 144 444 127 HOH HOH . F 6 HOH A 145 445 185 HOH HOH . F 6 HOH A 146 446 117 HOH HOH . F 6 HOH A 147 447 274 HOH HOH . F 6 HOH A 148 448 186 HOH HOH . F 6 HOH A 149 449 273 HOH HOH . F 6 HOH A 150 450 179 HOH HOH . F 6 HOH A 151 451 232 HOH HOH . F 6 HOH A 152 452 163 HOH HOH . F 6 HOH A 153 453 86 HOH HOH . F 6 HOH A 154 454 282 HOH HOH . F 6 HOH A 155 455 99 HOH HOH . F 6 HOH A 156 456 208 HOH HOH . F 6 HOH A 157 457 122 HOH HOH . F 6 HOH A 158 458 73 HOH HOH . F 6 HOH A 159 459 157 HOH HOH . F 6 HOH A 160 460 286 HOH HOH . F 6 HOH A 161 461 227 HOH HOH . F 6 HOH A 162 462 92 HOH HOH . F 6 HOH A 163 463 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A1B5E . . . B 2 7.088 13.254 22.073 1 26.03 ? N1 A1B5E 201 A 1 HETATM 2 N N3 A1B5E . . . B 2 11.397 14.716 17.742 1 25.63 ? N3 A1B5E 201 A 1 HETATM 3 C C4 A1B5E . . . B 2 9.181 14.15 23.126 1 25.37 ? C4 A1B5E 201 A 1 HETATM 4 C C5 A1B5E . . . B 2 9.469 12.706 23.533 1 25.24 ? C5 A1B5E 201 A 1 HETATM 5 C C6 A1B5E . . . B 2 10.387 11.932 22.832 1 25.27 ? C6 A1B5E 201 A 1 HETATM 6 C C7 A1B5E . . . B 2 10.542 10.586 23.119 1 25.56 ? C7 A1B5E 201 A 1 HETATM 7 C C8 A1B5E . . . B 2 9.808 10.001 24.128 1 25.31 ? C8 A1B5E 201 A 1 HETATM 8 C C10 A1B5E . . . B 2 8.75 12.11 24.565 1 24.88 ? C10 A1B5E 201 A 1 HETATM 9 C C13 A1B5E . . . B 2 11.162 15.528 18.763 1 25.99 ? C13 A1B5E 201 A 1 HETATM 10 C C15 A1B5E . . . B 2 11.182 15.475 22.469 1 27.2 ? C15 A1B5E 201 A 1 HETATM 11 O O1 A1B5E . . . B 2 11.484 15.816 23.61 1 27.79 ? O1 A1B5E 201 A 1 HETATM 12 C C14 A1B5E . . . B 2 11.847 15.905 21.183 1 26.21 ? C14 A1B5E 201 A 1 HETATM 13 C C12 A1B5E . . . B 2 11.311 14.909 20.143 1 26.12 ? C12 A1B5E 201 A 1 HETATM 14 O O A1B5E . . . B 2 10.742 16.682 18.62 1 25.14 ? O A1B5E 201 A 1 HETATM 15 C C11 A1B5E . . . B 2 9.949 14.51 20.702 1 25.85 ? C11 A1B5E 201 A 1 HETATM 16 N N2 A1B5E . . . B 2 10.136 14.679 22.15 1 26.29 ? N2 A1B5E 201 A 1 HETATM 17 C C3 A1B5E . . . B 2 7.793 14.269 22.535 1 25.42 ? C3 A1B5E 201 A 1 HETATM 18 C C2 A1B5E . . . B 2 5.896 13.806 21.655 1 25.9 ? C2 A1B5E 201 A 1 HETATM 19 C C1 A1B5E . . . B 2 5.902 15.144 21.852 1 25.74 ? C1 A1B5E 201 A 1 HETATM 20 N N A1B5E . . . B 2 7.121 15.444 22.402 1 25.59 ? N A1B5E 201 A 1 HETATM 21 C C A1B5E . . . B 2 7.613 16.794 22.671 1 25.83 ? C A1B5E 201 A 1 HETATM 22 C C9 A1B5E . . . B 2 8.916 10.763 24.855 1 24.71 ? C9 A1B5E 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #