data_7I7M
#
_model_server_result.job_id            fNRHEVQfZWfybPeDlPcqwQ 
_model_server_result.datetime_utc      '2025-06-25 22:36:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7i7m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    7I7M 
#
_exptl.entry_id    7I7M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.67 
_cell.angle_gamma         90 
_cell.entry_id            7I7M 
_cell.length_a            72.553 
_cell.length_b            61.704 
_cell.length_c            32.693 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7I7M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 50 A CYS 56 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? 
metalc ? metalc2 A SG CYS 52 A CYS 58 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? 
metalc ? metalc3 A SG CYS 110 A CYS 116 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc4 A ND1 HIS 112 A HIS 118 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 125 n n 
S C1 DMS sing 126 n n 
S C2 DMS sing 127 n n 
C1 H11 DMS sing 128 n n 
C1 H12 DMS sing 129 n n 
C1 H13 DMS sing 130 n n 
C2 H21 DMS sing 131 n n 
C2 H22 DMS sing 132 n n 
C2 H23 DMS sing 133 n n 
#
_atom_sites.entry_id                     7I7M 
_atom_sites.fract_transf_matrix[1][1]    0.013783 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000643 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016206 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.030621 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A1B5E A 1 201 201 A1B5E LIG . 
C 3 ZN A 1 202 1 ZN ZN . 
D 4 DMS A 1 203 6 DMS DMS . 
E 5 HOH A 1 301 59 HOH HOH . 
E 5 HOH A 2 302 18 HOH HOH . 
E 5 HOH A 3 303 29 HOH HOH . 
E 5 HOH A 4 304 11 HOH HOH . 
E 5 HOH A 5 305 22 HOH HOH . 
E 5 HOH A 6 306 9 HOH HOH . 
E 5 HOH A 7 307 36 HOH HOH . 
E 5 HOH A 8 308 60 HOH HOH . 
E 5 HOH A 9 309 12 HOH HOH . 
E 5 HOH A 10 310 27 HOH HOH . 
E 5 HOH A 11 311 7 HOH HOH . 
E 5 HOH A 12 312 48 HOH HOH . 
E 5 HOH A 13 313 14 HOH HOH . 
E 5 HOH A 14 314 32 HOH HOH . 
E 5 HOH A 15 315 25 HOH HOH . 
E 5 HOH A 16 316 16 HOH HOH . 
E 5 HOH A 17 317 45 HOH HOH . 
E 5 HOH A 18 318 33 HOH HOH . 
E 5 HOH A 19 319 83 HOH HOH . 
E 5 HOH A 20 320 19 HOH HOH . 
E 5 HOH A 21 321 17 HOH HOH . 
E 5 HOH A 22 322 39 HOH HOH . 
E 5 HOH A 23 323 57 HOH HOH . 
E 5 HOH A 24 324 24 HOH HOH . 
E 5 HOH A 25 325 40 HOH HOH . 
E 5 HOH A 26 326 8 HOH HOH . 
E 5 HOH A 27 327 23 HOH HOH . 
E 5 HOH A 28 328 4 HOH HOH . 
E 5 HOH A 29 329 34 HOH HOH . 
E 5 HOH A 30 330 81 HOH HOH . 
E 5 HOH A 31 331 47 HOH HOH . 
E 5 HOH A 32 332 10 HOH HOH . 
E 5 HOH A 33 333 82 HOH HOH . 
E 5 HOH A 34 334 53 HOH HOH . 
E 5 HOH A 35 335 2 HOH HOH . 
E 5 HOH A 36 336 37 HOH HOH . 
E 5 HOH A 37 337 30 HOH HOH . 
E 5 HOH A 38 338 79 HOH HOH . 
E 5 HOH A 39 339 74 HOH HOH . 
E 5 HOH A 40 340 54 HOH HOH . 
E 5 HOH A 41 341 51 HOH HOH . 
E 5 HOH A 42 342 35 HOH HOH . 
E 5 HOH A 43 343 55 HOH HOH . 
E 5 HOH A 44 344 61 HOH HOH . 
E 5 HOH A 45 345 67 HOH HOH . 
E 5 HOH A 46 346 56 HOH HOH . 
E 5 HOH A 47 347 15 HOH HOH . 
E 5 HOH A 48 348 63 HOH HOH . 
E 5 HOH A 49 349 21 HOH HOH . 
E 5 HOH A 50 350 5 HOH HOH . 
E 5 HOH A 51 351 50 HOH HOH . 
E 5 HOH A 52 352 76 HOH HOH . 
E 5 HOH A 53 353 20 HOH HOH . 
E 5 HOH A 54 354 85 HOH HOH . 
E 5 HOH A 55 355 3 HOH HOH . 
E 5 HOH A 56 356 64 HOH HOH . 
E 5 HOH A 57 357 49 HOH HOH . 
E 5 HOH A 58 358 13 HOH HOH . 
E 5 HOH A 59 359 66 HOH HOH . 
E 5 HOH A 60 360 26 HOH HOH . 
E 5 HOH A 61 361 6 HOH HOH . 
E 5 HOH A 62 362 75 HOH HOH . 
E 5 HOH A 63 363 28 HOH HOH . 
E 5 HOH A 64 364 73 HOH HOH . 
E 5 HOH A 65 365 38 HOH HOH . 
E 5 HOH A 66 366 70 HOH HOH . 
E 5 HOH A 67 367 77 HOH HOH . 
E 5 HOH A 68 368 87 HOH HOH . 
E 5 HOH A 69 369 42 HOH HOH . 
E 5 HOH A 70 370 31 HOH HOH . 
E 5 HOH A 71 371 43 HOH HOH . 
E 5 HOH A 72 372 80 HOH HOH . 
E 5 HOH A 73 373 41 HOH HOH . 
E 5 HOH A 74 374 65 HOH HOH . 
E 5 HOH A 75 375 58 HOH HOH . 
E 5 HOH A 76 376 86 HOH HOH . 
E 5 HOH A 77 377 68 HOH HOH . 
E 5 HOH A 78 378 72 HOH HOH . 
E 5 HOH A 79 379 52 HOH HOH . 
E 5 HOH A 80 380 44 HOH HOH . 
E 5 HOH A 81 381 71 HOH HOH . 
E 5 HOH A 82 382 69 HOH HOH . 
E 5 HOH A 83 383 62 HOH HOH . 
E 5 HOH A 84 384 78 HOH HOH . 
E 5 HOH A 85 385 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 4 19.996 -0.749 19.947 1 117.67 ? S DMS 203 A 1 
HETATM 2 O O DMS . . . D 4 18.552 -0.907 19.557 1 117.55 ? O DMS 203 A 1 
HETATM 3 C C1 DMS . . . D 4 20.078 0.042 21.581 1 117.62 ? C1 DMS 203 A 1 
HETATM 4 C C2 DMS . . . D 4 20.679 0.663 19.041 1 117.61 ? C2 DMS 203 A 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#