data_7JGW # _model_server_result.job_id neTFbiBm7AdBDarZVgyJOQ _model_server_result.datetime_utc '2024-12-03 20:00:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jgw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7JGW # _exptl.entry_id 7JGW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 617.717 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-[(8E)-8-{2-[4-(benzylcarbamoyl)-1,3-thiazol-2-yl]hydrazinylidene}-5,6,7,8-tetrahydronaphthalen-2-yl]-3-(2-phenylethoxy)pyridine-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JGW _cell.length_a 47.098 _cell.length_b 54.665 _cell.length_c 113.506 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JGW _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C35 H31 N5 O4 S' _chem_comp.formula_weight 617.717 _chem_comp.id V9S _chem_comp.mon_nstd_flag . _chem_comp.name '6-[(8E)-8-{2-[4-(benzylcarbamoyl)-1,3-thiazol-2-yl]hydrazinylidene}-5,6,7,8-tetrahydronaphthalen-2-yl]-3-(2-phenylethoxy)pyridine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C33 C34 V9S doub 358 n y C33 C32 V9S sing 359 n y C34 C35 V9S sing 360 n y C32 C31 V9S doub 361 n y C35 C30 V9S doub 362 n y C31 C30 V9S sing 363 n y C1 C3 V9S doub 364 n y C1 C2 V9S sing 365 n y C3 C4 V9S sing 366 n y C30 C29 V9S sing 367 n n O1 C8 V9S doub 368 n n C2 C6 V9S doub 369 n y C4 C7 V9S sing 370 n n C4 C5 V9S doub 371 n y C7 N1 V9S sing 372 n n C29 C28 V9S sing 373 n n C8 N1 V9S sing 374 n n C8 C9 V9S sing 375 n n C11 C9 V9S doub 376 n y C11 S1 V9S sing 377 n y C6 C5 V9S sing 378 n y C28 O4 V9S sing 379 n n C9 N2 V9S sing 380 n y S1 C10 V9S sing 381 n y O4 C25 V9S sing 382 n n C24 C25 V9S doub 383 n y C24 C23 V9S sing 384 n y N2 C10 V9S doub 385 n y C25 C26 V9S sing 386 n y C10 N3 V9S sing 387 n n C23 C22 V9S doub 388 n y C26 C27 V9S sing 389 n n C26 N5 V9S doub 390 n y N3 N4 V9S sing 391 n n C22 N5 V9S sing 392 n y C22 C19 V9S sing 393 n n O3 C27 V9S doub 394 n n N4 C12 V9S doub 395 e n C27 O2 V9S sing 396 n n C18 C19 V9S doub 397 n y C18 C17 V9S sing 398 n y C19 C20 V9S sing 399 n y C12 C17 V9S sing 400 n n C12 C13 V9S sing 401 n n C17 C16 V9S doub 402 n y C20 C21 V9S doub 403 n y C13 C14 V9S sing 404 n n C16 C21 V9S sing 405 n y C16 C15 V9S sing 406 n n C14 C15 V9S sing 407 n n C21 H1 V9S sing 408 n n C31 H2 V9S sing 409 n n O2 H3 V9S sing 410 n n C28 H4 V9S sing 411 n n C28 H5 V9S sing 412 n n C29 H6 V9S sing 413 n n C29 H7 V9S sing 414 n n C35 H8 V9S sing 415 n n C34 H9 V9S sing 416 n n C33 H10 V9S sing 417 n n C32 H11 V9S sing 418 n n C24 H12 V9S sing 419 n n C23 H13 V9S sing 420 n n C20 H14 V9S sing 421 n n C15 H15 V9S sing 422 n n C15 H16 V9S sing 423 n n C14 H17 V9S sing 424 n n C14 H18 V9S sing 425 n n C13 H19 V9S sing 426 n n C13 H20 V9S sing 427 n n C18 H21 V9S sing 428 n n N3 H22 V9S sing 429 n n C11 H23 V9S sing 430 n n N1 H24 V9S sing 431 n n C7 H25 V9S sing 432 n n C7 H26 V9S sing 433 n n C3 H27 V9S sing 434 n n C1 H28 V9S sing 435 n n C5 H29 V9S sing 436 n n C6 H30 V9S sing 437 n n C2 H31 V9S sing 438 n n # _atom_sites.entry_id 7JGW _atom_sites.fract_transf_matrix[1][1] 0.021232 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 V9S A 1 301 301 V9S THZ . C 3 HOH A 1 401 26 HOH HOH . C 3 HOH A 2 402 3 HOH HOH . C 3 HOH A 3 403 93 HOH HOH . C 3 HOH A 4 404 50 HOH HOH . C 3 HOH A 5 405 75 HOH HOH . C 3 HOH A 6 406 112 HOH HOH . C 3 HOH A 7 407 78 HOH HOH . C 3 HOH A 8 408 39 HOH HOH . C 3 HOH A 9 409 109 HOH HOH . C 3 HOH A 10 410 89 HOH HOH . C 3 HOH A 11 411 64 HOH HOH . C 3 HOH A 12 412 101 HOH HOH . C 3 HOH A 13 413 71 HOH HOH . C 3 HOH A 14 414 24 HOH HOH . C 3 HOH A 15 415 33 HOH HOH . C 3 HOH A 16 416 7 HOH HOH . C 3 HOH A 17 417 11 HOH HOH . C 3 HOH A 18 418 32 HOH HOH . C 3 HOH A 19 419 60 HOH HOH . C 3 HOH A 20 420 52 HOH HOH . C 3 HOH A 21 421 19 HOH HOH . C 3 HOH A 22 422 8 HOH HOH . C 3 HOH A 23 423 80 HOH HOH . C 3 HOH A 24 424 94 HOH HOH . C 3 HOH A 25 425 36 HOH HOH . C 3 HOH A 26 426 37 HOH HOH . C 3 HOH A 27 427 21 HOH HOH . C 3 HOH A 28 428 115 HOH HOH . C 3 HOH A 29 429 55 HOH HOH . C 3 HOH A 30 430 46 HOH HOH . C 3 HOH A 31 431 95 HOH HOH . C 3 HOH A 32 432 63 HOH HOH . C 3 HOH A 33 433 65 HOH HOH . C 3 HOH A 34 434 31 HOH HOH . C 3 HOH A 35 435 85 HOH HOH . C 3 HOH A 36 436 58 HOH HOH . C 3 HOH A 37 437 23 HOH HOH . C 3 HOH A 38 438 82 HOH HOH . C 3 HOH A 39 439 104 HOH HOH . C 3 HOH A 40 440 86 HOH HOH . C 3 HOH A 41 441 96 HOH HOH . C 3 HOH A 42 442 77 HOH HOH . C 3 HOH A 43 443 12 HOH HOH . C 3 HOH A 44 444 22 HOH HOH . C 3 HOH A 45 445 105 HOH HOH . C 3 HOH A 46 446 15 HOH HOH . C 3 HOH A 47 447 110 HOH HOH . C 3 HOH A 48 448 42 HOH HOH . C 3 HOH A 49 449 62 HOH HOH . C 3 HOH A 50 450 2 HOH HOH . C 3 HOH A 51 451 70 HOH HOH . C 3 HOH A 52 452 83 HOH HOH . C 3 HOH A 53 453 51 HOH HOH . C 3 HOH A 54 454 1 HOH HOH . C 3 HOH A 55 455 99 HOH HOH . C 3 HOH A 56 456 17 HOH HOH . C 3 HOH A 57 457 107 HOH HOH . C 3 HOH A 58 458 102 HOH HOH . C 3 HOH A 59 459 61 HOH HOH . C 3 HOH A 60 460 34 HOH HOH . C 3 HOH A 61 461 14 HOH HOH . C 3 HOH A 62 462 5 HOH HOH . C 3 HOH A 63 463 116 HOH HOH . C 3 HOH A 64 464 67 HOH HOH . C 3 HOH A 65 465 90 HOH HOH . C 3 HOH A 66 466 44 HOH HOH . C 3 HOH A 67 467 10 HOH HOH . C 3 HOH A 68 468 49 HOH HOH . C 3 HOH A 69 469 111 HOH HOH . C 3 HOH A 70 470 48 HOH HOH . C 3 HOH A 71 471 18 HOH HOH . C 3 HOH A 72 472 56 HOH HOH . C 3 HOH A 73 473 6 HOH HOH . C 3 HOH A 74 474 41 HOH HOH . C 3 HOH A 75 475 43 HOH HOH . C 3 HOH A 76 476 27 HOH HOH . C 3 HOH A 77 477 91 HOH HOH . C 3 HOH A 78 478 30 HOH HOH . C 3 HOH A 79 479 84 HOH HOH . C 3 HOH A 80 480 54 HOH HOH . C 3 HOH A 81 481 79 HOH HOH . C 3 HOH A 82 482 73 HOH HOH . C 3 HOH A 83 483 72 HOH HOH . C 3 HOH A 84 484 40 HOH HOH . C 3 HOH A 85 485 114 HOH HOH . C 3 HOH A 86 486 106 HOH HOH . C 3 HOH A 87 487 9 HOH HOH . C 3 HOH A 88 488 92 HOH HOH . C 3 HOH A 89 489 68 HOH HOH . C 3 HOH A 90 490 38 HOH HOH . C 3 HOH A 91 491 74 HOH HOH . C 3 HOH A 92 492 98 HOH HOH . C 3 HOH A 93 493 81 HOH HOH . C 3 HOH A 94 494 53 HOH HOH . C 3 HOH A 95 495 113 HOH HOH . C 3 HOH A 96 496 88 HOH HOH . C 3 HOH A 97 497 66 HOH HOH . C 3 HOH A 98 498 69 HOH HOH . C 3 HOH A 99 499 20 HOH HOH . C 3 HOH A 100 500 57 HOH HOH . C 3 HOH A 101 501 100 HOH HOH . C 3 HOH A 102 502 108 HOH HOH . C 3 HOH A 103 503 103 HOH HOH . C 3 HOH A 104 504 76 HOH HOH . C 3 HOH A 105 505 29 HOH HOH . C 3 HOH A 106 506 97 HOH HOH . C 3 HOH A 107 507 59 HOH HOH . C 3 HOH A 108 508 47 HOH HOH . C 3 HOH A 109 509 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 V9S . . . B 2 -5.237 -3.039 21.918 1 15.55 ? S1 V9S 301 A 1 HETATM 2 C C17 V9S . . . B 2 -5.138 -0.884 26.214 1 12.7 ? C17 V9S 301 A 1 HETATM 3 C C21 V9S . . . B 2 -5.76 0.894 27.661 1 15.27 ? C21 V9S 301 A 1 HETATM 4 C C31 V9S . . . B 2 0.561 4.724 18.414 1 16.35 ? C31 V9S 301 A 1 HETATM 5 O O2 V9S . . . B 2 -3.363 6.261 25.557 1 20.35 ? O2 V9S 301 A 1 HETATM 6 C C27 V9S . . . B 2 -2.55 5.672 24.869 1 19.82 ? C27 V9S 301 A 1 HETATM 7 O O3 V9S . . . B 2 -1.329 6.107 24.646 1 26.63 ? O3 V9S 301 A 1 HETATM 8 C C26 V9S . . . B 2 -2.946 4.376 24.249 1 15.82 ? C26 V9S 301 A 1 HETATM 9 C C25 V9S . . . B 2 -2.721 4.1 22.901 1 13.67 ? C25 V9S 301 A 1 HETATM 10 O O4 V9S . . . B 2 -2.129 5.04 22.103 1 15.38 ? O4 V9S 301 A 1 HETATM 11 C C28 V9S . . . B 2 -1.675 4.646 20.811 1 15.88 ? C28 V9S 301 A 1 HETATM 12 C C29 V9S . . . B 2 -0.81 5.797 20.228 1 14.47 ? C29 V9S 301 A 1 HETATM 13 C C30 V9S . . . B 2 -0.549 5.491 18.772 1 15.23 ? C30 V9S 301 A 1 HETATM 14 C C35 V9S . . . B 2 -1.458 5.871 17.78 1 17.51 ? C35 V9S 301 A 1 HETATM 15 C C34 V9S . . . B 2 -1.252 5.537 16.444 1 17.02 ? C34 V9S 301 A 1 HETATM 16 C C33 V9S . . . B 2 -0.134 4.792 16.091 1 16.98 ? C33 V9S 301 A 1 HETATM 17 C C32 V9S . . . B 2 0.755 4.386 17.072 1 17.25 ? C32 V9S 301 A 1 HETATM 18 C C24 V9S . . . B 2 -3.212 2.888 22.392 1 13.91 ? C24 V9S 301 A 1 HETATM 19 C C23 V9S . . . B 2 -3.807 1.993 23.28 1 14.43 ? C23 V9S 301 A 1 HETATM 20 N N5 V9S . . . B 2 -3.546 3.499 25.089 1 14.59 ? N5 V9S 301 A 1 HETATM 21 C C22 V9S . . . B 2 -3.956 2.295 24.617 1 12.78 ? C22 V9S 301 A 1 HETATM 22 C C19 V9S . . . B 2 -4.603 1.383 25.587 1 13.74 ? C19 V9S 301 A 1 HETATM 23 C C20 V9S . . . B 2 -5.161 1.817 26.785 1 15.59 ? C20 V9S 301 A 1 HETATM 24 C C16 V9S . . . B 2 -5.714 -0.475 27.389 1 14.76 ? C16 V9S 301 A 1 HETATM 25 C C15 V9S . . . B 2 -6.381 -1.425 28.374 1 15.47 ? C15 V9S 301 A 1 HETATM 26 C C14 V9S . . . B 2 -6.601 -2.808 27.783 1 19.14 ? C14 V9S 301 A 1 HETATM 27 C C13 V9S . . . B 2 -5.343 -3.277 27.056 1 16.51 ? C13 V9S 301 A 1 HETATM 28 C C18 V9S . . . B 2 -4.582 0.012 25.345 1 13.2 ? C18 V9S 301 A 1 HETATM 29 C C12 V9S . . . B 2 -5.111 -2.321 25.899 1 13.59 ? C12 V9S 301 A 1 HETATM 30 N N4 V9S . . . B 2 -4.753 -2.732 24.74 1 13.31 ? N4 V9S 301 A 1 HETATM 31 N N3 V9S . . . B 2 -4.806 -4.02 24.36 1 12.7 ? N3 V9S 301 A 1 HETATM 32 C C10 V9S . . . B 2 -4.865 -4.25 23.054 1 12.58 ? C10 V9S 301 A 1 HETATM 33 N N2 V9S . . . B 2 -4.716 -5.467 22.498 1 14.13 ? N2 V9S 301 A 1 HETATM 34 C C11 V9S . . . B 2 -5.18 -4.072 20.62 1 14.75 ? C11 V9S 301 A 1 HETATM 35 C C9 V9S . . . B 2 -4.856 -5.365 21.132 1 15.8 ? C9 V9S 301 A 1 HETATM 36 C C8 V9S . . . B 2 -4.675 -6.554 20.246 1 15.23 ? C8 V9S 301 A 1 HETATM 37 O O1 V9S . . . B 2 -4.799 -6.397 19.041 1 16.66 ? O1 V9S 301 A 1 HETATM 38 N N1 V9S . . . B 2 -4.286 -7.703 20.828 1 16.53 ? N1 V9S 301 A 1 HETATM 39 C C7 V9S . . . B 2 -4.034 -8.916 20.063 1 20.14 ? C7 V9S 301 A 1 HETATM 40 C C4 V9S . . . B 2 -2.584 -9.335 19.904 1 25.21 ? C4 V9S 301 A 1 HETATM 41 C C3 V9S . . . B 2 -1.902 -9.06 18.742 1 28.17 ? C3 V9S 301 A 1 HETATM 42 C C1 V9S . . . B 2 -0.583 -9.469 18.549 1 29.74 ? C1 V9S 301 A 1 HETATM 43 C C5 V9S . . . B 2 -1.967 -10.113 20.868 1 31.59 ? C5 V9S 301 A 1 HETATM 44 C C6 V9S . . . B 2 -0.656 -10.54 20.712 1 38.12 ? C6 V9S 301 A 1 HETATM 45 C C2 V9S . . . B 2 0.042 -10.209 19.545 1 36.21 ? C2 V9S 301 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 45 #