data_7JIR # _model_server_result.job_id MAZ316bVi8Jpq381C0y7TA _model_server_result.datetime_utc '2024-10-24 04:27:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jir # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":510}' # _entry.id 7JIR # _exptl.entry_id 7JIR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JIR _cell.length_a 113.864 _cell.length_b 113.864 _cell.length_c 219.576 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JIR _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 20 A HIS 17 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.805 ? metalc ? metalc2 A OD1 ASP 65 A ASP 62 1_555 F ZN ZN . A ZN 505 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc3 A OE2 GLU 70 A GLU 67 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc4 A ND1 HIS 76 A HIS 73 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc5 A ND1 HIS 92 A HIS 89 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.119 ? metalc ? metalc6 A ND1 HIS 92 A HIS 89 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.192 ? metalc ? metalc7 A OD2 ASP 111 A ASP 108 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.057 ? metalc ? metalc8 A SG CYS 195 A CYS 192 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc9 A SG CYS 227 A CYS 224 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc10 A SG CYS 229 A CYS 226 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc11 A SG CYS 273 A CYS 270 1_555 E ZN ZN . A ZN 504 15_555 ? ? ? ? A ? ? ? ? ? ? ? 2.443 ? metalc ? metalc12 A SG CYS 273 A CYS 270 1_555 E ZN ZN . A ZN 504 15_555 ? ? ? ? B ? ? ? ? ? ? ? 2.29 ? metalc ? metalc13 E ZN ZN . A ZN 504 1_555 M O HOH . A HOH 720 15_555 ? B ? ? ? ? ? ? ? ? ? ? 2.298 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 224 n n O1 C6 MES sing 225 n n C2 C3 MES sing 226 n n C2 H21 MES sing 227 n n C2 H22 MES sing 228 n n C3 N4 MES sing 229 n n C3 H31 MES sing 230 n n C3 H32 MES sing 231 n n N4 C5 MES sing 232 n n N4 C7 MES sing 233 n n N4 HN4 MES sing 234 n n C5 C6 MES sing 235 n n C5 H51 MES sing 236 n n C5 H52 MES sing 237 n n C6 H61 MES sing 238 n n C6 H62 MES sing 239 n n C7 C8 MES sing 240 n n C7 H71 MES sing 241 n n C7 H72 MES sing 242 n n C8 S MES sing 243 n n C8 H81 MES sing 244 n n C8 H82 MES sing 245 n n S O1S MES doub 246 n n S O2S MES doub 247 n n S O3S MES sing 248 n n # _atom_sites.entry_id 7JIR _atom_sites.fract_transf_matrix[1][1] 0.008782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008782 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TTT A 1 501 501 TTT Y57 . C 3 ZN A 1 502 502 ZN ZN . D 3 ZN A 1 503 503 ZN ZN . E 3 ZN A 1 504 504 ZN ZN . F 3 ZN A 1 505 505 ZN ZN . G 4 CL A 1 506 506 CL CL . H 4 CL A 1 507 507 CL CL . I 4 CL A 1 508 508 CL CL . J 4 CL A 1 509 509 CL CL . K 5 MES A 1 510 510 MES MES . L 6 ACT A 1 511 511 ACT ACT . M 7 HOH A 1 601 116 HOH HOH . M 7 HOH A 2 602 3 HOH HOH . M 7 HOH A 3 603 26 HOH HOH . M 7 HOH A 4 604 59 HOH HOH . M 7 HOH A 5 605 112 HOH HOH . M 7 HOH A 6 606 7 HOH HOH . M 7 HOH A 7 607 24 HOH HOH . M 7 HOH A 8 608 13 HOH HOH . M 7 HOH A 9 609 115 HOH HOH . M 7 HOH A 10 610 83 HOH HOH . M 7 HOH A 11 611 61 HOH HOH . M 7 HOH A 12 612 52 HOH HOH . M 7 HOH A 13 613 125 HOH HOH . M 7 HOH A 14 614 114 HOH HOH . M 7 HOH A 15 615 6 HOH HOH . M 7 HOH A 16 616 113 HOH HOH . M 7 HOH A 17 617 70 HOH HOH . M 7 HOH A 18 618 119 HOH HOH . M 7 HOH A 19 619 28 HOH HOH . M 7 HOH A 20 620 46 HOH HOH . M 7 HOH A 21 621 14 HOH HOH . M 7 HOH A 22 622 57 HOH HOH . M 7 HOH A 23 623 127 HOH HOH . M 7 HOH A 24 624 95 HOH HOH . M 7 HOH A 25 625 35 HOH HOH . M 7 HOH A 26 626 17 HOH HOH . M 7 HOH A 27 627 18 HOH HOH . M 7 HOH A 28 628 63 HOH HOH . M 7 HOH A 29 629 33 HOH HOH . M 7 HOH A 30 630 51 HOH HOH . M 7 HOH A 31 631 39 HOH HOH . M 7 HOH A 32 632 82 HOH HOH . M 7 HOH A 33 633 45 HOH HOH . M 7 HOH A 34 634 84 HOH HOH . M 7 HOH A 35 635 12 HOH HOH . M 7 HOH A 36 636 105 HOH HOH . M 7 HOH A 37 637 4 HOH HOH . M 7 HOH A 38 638 54 HOH HOH . M 7 HOH A 39 639 111 HOH HOH . M 7 HOH A 40 640 56 HOH HOH . M 7 HOH A 41 641 80 HOH HOH . M 7 HOH A 42 642 44 HOH HOH . M 7 HOH A 43 643 77 HOH HOH . M 7 HOH A 44 644 41 HOH HOH . M 7 HOH A 45 645 48 HOH HOH . M 7 HOH A 46 646 91 HOH HOH . M 7 HOH A 47 647 10 HOH HOH . M 7 HOH A 48 648 27 HOH HOH . M 7 HOH A 49 649 10 HOH HOH . M 7 HOH A 50 650 25 HOH HOH . M 7 HOH A 51 651 29 HOH HOH . M 7 HOH A 52 652 94 HOH HOH . M 7 HOH A 53 653 69 HOH HOH . M 7 HOH A 54 654 67 HOH HOH . M 7 HOH A 55 655 68 HOH HOH . M 7 HOH A 56 656 74 HOH HOH . M 7 HOH A 57 657 53 HOH HOH . M 7 HOH A 58 658 96 HOH HOH . M 7 HOH A 59 659 108 HOH HOH . M 7 HOH A 60 660 30 HOH HOH . M 7 HOH A 61 661 40 HOH HOH . M 7 HOH A 62 662 12 HOH HOH . M 7 HOH A 63 663 76 HOH HOH . M 7 HOH A 64 664 31 HOH HOH . M 7 HOH A 65 665 85 HOH HOH . M 7 HOH A 66 666 123 HOH HOH . M 7 HOH A 67 667 1 HOH HOH . M 7 HOH A 68 668 62 HOH HOH . M 7 HOH A 69 669 5 HOH HOH . M 7 HOH A 70 670 107 HOH HOH . M 7 HOH A 71 671 37 HOH HOH . M 7 HOH A 72 672 43 HOH HOH . M 7 HOH A 73 673 71 HOH HOH . M 7 HOH A 74 674 103 HOH HOH . M 7 HOH A 75 675 16 HOH HOH . M 7 HOH A 76 676 60 HOH HOH . M 7 HOH A 77 677 50 HOH HOH . M 7 HOH A 78 678 19 HOH HOH . M 7 HOH A 79 679 20 HOH HOH . M 7 HOH A 80 680 11 HOH HOH . M 7 HOH A 81 681 124 HOH HOH . M 7 HOH A 82 682 66 HOH HOH . M 7 HOH A 83 683 55 HOH HOH . M 7 HOH A 84 684 118 HOH HOH . M 7 HOH A 85 685 2 HOH HOH . M 7 HOH A 86 686 75 HOH HOH . M 7 HOH A 87 687 1 HOH HOH . M 7 HOH A 88 688 34 HOH HOH . M 7 HOH A 89 689 23 HOH HOH . M 7 HOH A 90 690 73 HOH HOH . M 7 HOH A 91 691 117 HOH HOH . M 7 HOH A 92 692 98 HOH HOH . M 7 HOH A 93 693 21 HOH HOH . M 7 HOH A 94 694 2 HOH HOH . M 7 HOH A 95 695 32 HOH HOH . M 7 HOH A 96 696 65 HOH HOH . M 7 HOH A 97 697 38 HOH HOH . M 7 HOH A 98 698 100 HOH HOH . M 7 HOH A 99 699 8 HOH HOH . M 7 HOH A 100 700 102 HOH HOH . M 7 HOH A 101 701 121 HOH HOH . M 7 HOH A 102 702 9 HOH HOH . M 7 HOH A 103 703 122 HOH HOH . M 7 HOH A 104 704 42 HOH HOH . M 7 HOH A 105 705 15 HOH HOH . M 7 HOH A 106 706 22 HOH HOH . M 7 HOH A 107 707 87 HOH HOH . M 7 HOH A 108 708 64 HOH HOH . M 7 HOH A 109 709 104 HOH HOH . M 7 HOH A 110 710 4 HOH HOH . M 7 HOH A 111 711 7 HOH HOH . M 7 HOH A 112 712 3 HOH HOH . M 7 HOH A 113 713 106 HOH HOH . M 7 HOH A 114 714 120 HOH HOH . M 7 HOH A 115 715 109 HOH HOH . M 7 HOH A 116 716 8 HOH HOH . M 7 HOH A 117 717 9 HOH HOH . M 7 HOH A 118 718 93 HOH HOH . M 7 HOH A 119 719 5 HOH HOH . M 7 HOH A 120 720 97 HOH HOH . M 7 HOH A 121 721 126 HOH HOH . M 7 HOH A 122 722 99 HOH HOH . M 7 HOH A 123 723 11 HOH HOH . M 7 HOH A 124 724 6 HOH HOH . M 7 HOH A 125 725 72 HOH HOH . M 7 HOH A 126 726 58 HOH HOH . M 7 HOH A 127 727 110 HOH HOH . M 7 HOH A 128 728 78 HOH HOH . M 7 HOH A 129 729 79 HOH HOH . M 7 HOH A 130 730 36 HOH HOH . M 7 HOH A 131 731 49 HOH HOH . M 7 HOH A 132 732 92 HOH HOH . M 7 HOH A 133 733 47 HOH HOH . M 7 HOH A 134 734 89 HOH HOH . M 7 HOH A 135 735 81 HOH HOH . M 7 HOH A 136 736 90 HOH HOH . M 7 HOH A 137 737 88 HOH HOH . M 7 HOH A 138 738 101 HOH HOH . M 7 HOH A 139 739 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . K 5 31.578 57.385 4.749 1 119.43 ? O1 MES 510 A 1 HETATM 2 C C2 MES . . . K 5 31.447 56.229 3.934 1 115.92 ? C2 MES 510 A 1 HETATM 3 C C3 MES . . . K 5 30.433 55.273 4.512 1 117.72 ? C3 MES 510 A 1 HETATM 4 N N4 MES . . . K 5 30.801 54.863 5.909 1 115 ? N4 MES 510 A 1 HETATM 5 C C5 MES . . . K 5 31.052 56.087 6.738 1 116.76 ? C5 MES 510 A 1 HETATM 6 C C6 MES . . . K 5 32.024 57.016 6.047 1 118.15 ? C6 MES 510 A 1 HETATM 7 C C7 MES . . . K 5 29.752 53.942 6.479 1 115.05 ? C7 MES 510 A 1 HETATM 8 C C8 MES . . . K 5 29.601 53.961 7.992 1 122 ? C8 MES 510 A 1 HETATM 9 S S MES . . . K 5 30.619 52.753 8.84 1 129.67 ? S MES 510 A 1 HETATM 10 O O1S MES . . . K 5 30.345 51.49 8.207 1 119.25 ? O1S MES 510 A 1 HETATM 11 O O2S MES . . . K 5 31.987 53.185 8.706 1 114.1 ? O2S MES 510 A 1 HETATM 12 O O3S MES . . . K 5 30.199 52.766 10.215 1 133.47 ? O3S MES 510 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #