data_7JJ1 # _model_server_result.job_id rt4tRi0-htuDx2r5wkHTOw _model_server_result.datetime_utc '2024-12-12 00:01:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":504}' # _entry.id 7JJ1 # _exptl.entry_id 7JJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JJ1 _cell.length_a 157.682 _cell.length_b 164.755 _cell.length_c 187.683 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,P 1 1 B,I,J,K,Q 2 1 C,L,M,N,O,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 K N N ? 4 N N N ? 4 O N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id I _struct_conn.ptnr1_label_atom_id FE _struct_conn.ptnr1_label_comp_id HEM _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id HEM _struct_conn.ptnr1_auth_seq_id 501 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id K _struct_conn.ptnr2_label_atom_id N3 _struct_conn.ptnr2_label_comp_id IMD _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id IMD _struct_conn.ptnr2_auth_seq_id 503 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.515 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 316 n y N1 C5 IMD sing 317 n y N1 HN1 IMD sing 318 n n C2 N3 IMD doub 319 n y C2 H2 IMD sing 320 n n N3 C4 IMD sing 321 n y N3 HN3 IMD sing 322 n n C4 C5 IMD doub 323 n y C4 H4 IMD sing 324 n n C5 H5 IMD sing 325 n n # _atom_sites.entry_id 7JJ1 _atom_sites.fract_transf_matrix[1][1] 0.006342 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005328 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HEM A 1 501 470 HEM HEM . E 3 16A A 1 502 471 16A 16A . F 4 IMD A 1 503 472 IMD IMD . G 4 IMD A 1 504 473 IMD IMD . H 4 IMD A 1 505 474 IMD IMD . I 2 HEM B 1 501 470 HEM HEM . J 3 16A B 1 502 471 16A 16A . K 4 IMD B 1 503 472 IMD IMD . L 2 HEM C 1 501 470 HEM HEM . M 3 16A C 1 502 471 16A 16A . N 4 IMD C 1 503 472 IMD IMD . O 4 IMD C 1 504 473 IMD IMD . P 5 HOH A 1 601 463 HOH HOH . P 5 HOH A 2 602 457 HOH HOH . P 5 HOH A 3 603 464 HOH HOH . P 5 HOH A 4 604 462 HOH HOH . P 5 HOH A 5 605 458 HOH HOH . P 5 HOH A 6 606 456 HOH HOH . P 5 HOH A 7 607 455 HOH HOH . P 5 HOH A 8 608 466 HOH HOH . P 5 HOH A 9 609 460 HOH HOH . P 5 HOH A 10 610 461 HOH HOH . P 5 HOH A 11 611 469 HOH HOH . P 5 HOH A 12 612 453 HOH HOH . P 5 HOH A 13 613 472 HOH HOH . P 5 HOH A 14 614 459 HOH HOH . P 5 HOH A 15 615 465 HOH HOH . P 5 HOH A 16 616 474 HOH HOH . P 5 HOH A 17 617 454 HOH HOH . P 5 HOH A 18 618 473 HOH HOH . P 5 HOH A 19 619 468 HOH HOH . Q 5 HOH B 1 601 463 HOH HOH . Q 5 HOH B 2 602 462 HOH HOH . Q 5 HOH B 3 603 452 HOH HOH . Q 5 HOH B 4 604 461 HOH HOH . Q 5 HOH B 5 605 458 HOH HOH . Q 5 HOH B 6 606 453 HOH HOH . Q 5 HOH B 7 607 454 HOH HOH . Q 5 HOH B 8 608 473 HOH HOH . Q 5 HOH B 9 609 459 HOH HOH . Q 5 HOH B 10 610 469 HOH HOH . Q 5 HOH B 11 611 452 HOH HOH . Q 5 HOH B 12 612 467 HOH HOH . Q 5 HOH B 13 613 464 HOH HOH . Q 5 HOH B 14 614 455 HOH HOH . R 5 HOH C 1 601 458 HOH HOH . R 5 HOH C 2 602 464 HOH HOH . R 5 HOH C 3 603 454 HOH HOH . R 5 HOH C 4 604 462 HOH HOH . R 5 HOH C 5 605 451 HOH HOH . R 5 HOH C 6 606 460 HOH HOH . R 5 HOH C 7 607 466 HOH HOH . R 5 HOH C 8 608 461 HOH HOH . R 5 HOH C 9 609 463 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . G 4 3.768 -84.838 17.465 1 60.99 ? N1 IMD 504 A 1 HETATM 2 C C2 IMD . . . G 4 3.724 -83.596 17.011 1 54.67 ? C2 IMD 504 A 1 HETATM 3 N N3 IMD . . . G 4 4.939 -83.105 17.038 1 65.82 ? N3 IMD 504 A 1 HETATM 4 C C4 IMD . . . G 4 5.774 -84.033 17.514 1 78.23 ? C4 IMD 504 A 1 HETATM 5 C C5 IMD . . . G 4 5.038 -85.127 17.785 1 65.11 ? C5 IMD 504 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #