data_7JJG
#
_model_server_result.job_id            '_fJH4Fs6ZJXqtWgCV-UJ9Q' 
_model_server_result.datetime_utc      '2024-12-22 02:50:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jjg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1703}' 
#
_entry.id    7JJG 
#
_exptl.entry_id    7JJG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7JJG 
_cell.length_a            46.74 
_cell.length_b            57.47 
_cell.length_c            59.31 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7JJG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 138 n n 
C1 C2 GOL sing 139 n n 
C1 H11 GOL sing 140 n n 
C1 H12 GOL sing 141 n n 
O1 HO1 GOL sing 142 n n 
C2 O2 GOL sing 143 n n 
C2 C3 GOL sing 144 n n 
C2 H2 GOL sing 145 n n 
O2 HO2 GOL sing 146 n n 
C3 O3 GOL sing 147 n n 
C3 H31 GOL sing 148 n n 
C3 H32 GOL sing 149 n n 
O3 HO3 GOL sing 150 n n 
#
_atom_sites.entry_id                     7JJG 
_atom_sites.fract_transf_matrix[1][1]    0.021395 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0174 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016861 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 VCD A 1 1701 1 VCD AZ0 . 
C 3 EDO A 1 1702 1 EDO EDO . 
D 4 GOL A 1 1703 1 GOL GOL . 
E 5 HOH A 1 1801 70 HOH HOH . 
E 5 HOH A 2 1802 77 HOH HOH . 
E 5 HOH A 3 1803 176 HOH HOH . 
E 5 HOH A 4 1804 24 HOH HOH . 
E 5 HOH A 5 1805 32 HOH HOH . 
E 5 HOH A 6 1806 26 HOH HOH . 
E 5 HOH A 7 1807 99 HOH HOH . 
E 5 HOH A 8 1808 85 HOH HOH . 
E 5 HOH A 9 1809 135 HOH HOH . 
E 5 HOH A 10 1810 157 HOH HOH . 
E 5 HOH A 11 1811 183 HOH HOH . 
E 5 HOH A 12 1812 5 HOH HOH . 
E 5 HOH A 13 1813 76 HOH HOH . 
E 5 HOH A 14 1814 93 HOH HOH . 
E 5 HOH A 15 1815 86 HOH HOH . 
E 5 HOH A 16 1816 54 HOH HOH . 
E 5 HOH A 17 1817 170 HOH HOH . 
E 5 HOH A 18 1818 46 HOH HOH . 
E 5 HOH A 19 1819 25 HOH HOH . 
E 5 HOH A 20 1820 14 HOH HOH . 
E 5 HOH A 21 1821 106 HOH HOH . 
E 5 HOH A 22 1822 57 HOH HOH . 
E 5 HOH A 23 1823 59 HOH HOH . 
E 5 HOH A 24 1824 113 HOH HOH . 
E 5 HOH A 25 1825 36 HOH HOH . 
E 5 HOH A 26 1826 100 HOH HOH . 
E 5 HOH A 27 1827 1 HOH HOH . 
E 5 HOH A 28 1828 126 HOH HOH . 
E 5 HOH A 29 1829 96 HOH HOH . 
E 5 HOH A 30 1830 40 HOH HOH . 
E 5 HOH A 31 1831 37 HOH HOH . 
E 5 HOH A 32 1832 41 HOH HOH . 
E 5 HOH A 33 1833 11 HOH HOH . 
E 5 HOH A 34 1834 8 HOH HOH . 
E 5 HOH A 35 1835 145 HOH HOH . 
E 5 HOH A 36 1836 13 HOH HOH . 
E 5 HOH A 37 1837 30 HOH HOH . 
E 5 HOH A 38 1838 4 HOH HOH . 
E 5 HOH A 39 1839 80 HOH HOH . 
E 5 HOH A 40 1840 90 HOH HOH . 
E 5 HOH A 41 1841 67 HOH HOH . 
E 5 HOH A 42 1842 56 HOH HOH . 
E 5 HOH A 43 1843 50 HOH HOH . 
E 5 HOH A 44 1844 31 HOH HOH . 
E 5 HOH A 45 1845 178 HOH HOH . 
E 5 HOH A 46 1846 3 HOH HOH . 
E 5 HOH A 47 1847 73 HOH HOH . 
E 5 HOH A 48 1848 35 HOH HOH . 
E 5 HOH A 49 1849 23 HOH HOH . 
E 5 HOH A 50 1850 7 HOH HOH . 
E 5 HOH A 51 1851 78 HOH HOH . 
E 5 HOH A 52 1852 27 HOH HOH . 
E 5 HOH A 53 1853 43 HOH HOH . 
E 5 HOH A 54 1854 15 HOH HOH . 
E 5 HOH A 55 1855 10 HOH HOH . 
E 5 HOH A 56 1856 154 HOH HOH . 
E 5 HOH A 57 1857 61 HOH HOH . 
E 5 HOH A 58 1858 144 HOH HOH . 
E 5 HOH A 59 1859 171 HOH HOH . 
E 5 HOH A 60 1860 12 HOH HOH . 
E 5 HOH A 61 1861 114 HOH HOH . 
E 5 HOH A 62 1862 158 HOH HOH . 
E 5 HOH A 63 1863 97 HOH HOH . 
E 5 HOH A 64 1864 53 HOH HOH . 
E 5 HOH A 65 1865 29 HOH HOH . 
E 5 HOH A 66 1866 45 HOH HOH . 
E 5 HOH A 67 1867 2 HOH HOH . 
E 5 HOH A 68 1868 71 HOH HOH . 
E 5 HOH A 69 1869 94 HOH HOH . 
E 5 HOH A 70 1870 19 HOH HOH . 
E 5 HOH A 71 1871 18 HOH HOH . 
E 5 HOH A 72 1872 39 HOH HOH . 
E 5 HOH A 73 1873 17 HOH HOH . 
E 5 HOH A 74 1874 48 HOH HOH . 
E 5 HOH A 75 1875 87 HOH HOH . 
E 5 HOH A 76 1876 81 HOH HOH . 
E 5 HOH A 77 1877 21 HOH HOH . 
E 5 HOH A 78 1878 49 HOH HOH . 
E 5 HOH A 79 1879 98 HOH HOH . 
E 5 HOH A 80 1880 66 HOH HOH . 
E 5 HOH A 81 1881 129 HOH HOH . 
E 5 HOH A 82 1882 84 HOH HOH . 
E 5 HOH A 83 1883 174 HOH HOH . 
E 5 HOH A 84 1884 38 HOH HOH . 
E 5 HOH A 85 1885 9 HOH HOH . 
E 5 HOH A 86 1886 131 HOH HOH . 
E 5 HOH A 87 1887 108 HOH HOH . 
E 5 HOH A 88 1888 79 HOH HOH . 
E 5 HOH A 89 1889 172 HOH HOH . 
E 5 HOH A 90 1890 34 HOH HOH . 
E 5 HOH A 91 1891 111 HOH HOH . 
E 5 HOH A 92 1892 28 HOH HOH . 
E 5 HOH A 93 1893 20 HOH HOH . 
E 5 HOH A 94 1894 60 HOH HOH . 
E 5 HOH A 95 1895 143 HOH HOH . 
E 5 HOH A 96 1896 173 HOH HOH . 
E 5 HOH A 97 1897 182 HOH HOH . 
E 5 HOH A 98 1898 164 HOH HOH . 
E 5 HOH A 99 1899 52 HOH HOH . 
E 5 HOH A 100 1900 22 HOH HOH . 
E 5 HOH A 101 1901 16 HOH HOH . 
E 5 HOH A 102 1902 64 HOH HOH . 
E 5 HOH A 103 1903 44 HOH HOH . 
E 5 HOH A 104 1904 168 HOH HOH . 
E 5 HOH A 105 1905 103 HOH HOH . 
E 5 HOH A 106 1906 83 HOH HOH . 
E 5 HOH A 107 1907 62 HOH HOH . 
E 5 HOH A 108 1908 112 HOH HOH . 
E 5 HOH A 109 1909 110 HOH HOH . 
E 5 HOH A 110 1910 107 HOH HOH . 
E 5 HOH A 111 1911 68 HOH HOH . 
E 5 HOH A 112 1912 139 HOH HOH . 
E 5 HOH A 113 1913 117 HOH HOH . 
E 5 HOH A 114 1914 119 HOH HOH . 
E 5 HOH A 115 1915 116 HOH HOH . 
E 5 HOH A 116 1916 151 HOH HOH . 
E 5 HOH A 117 1917 101 HOH HOH . 
E 5 HOH A 118 1918 132 HOH HOH . 
E 5 HOH A 119 1919 72 HOH HOH . 
E 5 HOH A 120 1920 6 HOH HOH . 
E 5 HOH A 121 1921 161 HOH HOH . 
E 5 HOH A 122 1922 122 HOH HOH . 
E 5 HOH A 123 1923 130 HOH HOH . 
E 5 HOH A 124 1924 128 HOH HOH . 
E 5 HOH A 125 1925 69 HOH HOH . 
E 5 HOH A 126 1926 146 HOH HOH . 
E 5 HOH A 127 1927 152 HOH HOH . 
E 5 HOH A 128 1928 148 HOH HOH . 
E 5 HOH A 129 1929 47 HOH HOH . 
E 5 HOH A 130 1930 51 HOH HOH . 
E 5 HOH A 131 1931 155 HOH HOH . 
E 5 HOH A 132 1932 63 HOH HOH . 
E 5 HOH A 133 1933 127 HOH HOH . 
E 5 HOH A 134 1934 134 HOH HOH . 
E 5 HOH A 135 1935 121 HOH HOH . 
E 5 HOH A 136 1936 179 HOH HOH . 
E 5 HOH A 137 1937 75 HOH HOH . 
E 5 HOH A 138 1938 118 HOH HOH . 
E 5 HOH A 139 1939 137 HOH HOH . 
E 5 HOH A 140 1940 140 HOH HOH . 
E 5 HOH A 141 1941 65 HOH HOH . 
E 5 HOH A 142 1942 150 HOH HOH . 
E 5 HOH A 143 1943 104 HOH HOH . 
E 5 HOH A 144 1944 92 HOH HOH . 
E 5 HOH A 145 1945 115 HOH HOH . 
E 5 HOH A 146 1946 42 HOH HOH . 
E 5 HOH A 147 1947 82 HOH HOH . 
E 5 HOH A 148 1948 55 HOH HOH . 
E 5 HOH A 149 1949 33 HOH HOH . 
E 5 HOH A 150 1950 120 HOH HOH . 
E 5 HOH A 151 1951 95 HOH HOH . 
E 5 HOH A 152 1952 91 HOH HOH . 
E 5 HOH A 153 1953 74 HOH HOH . 
E 5 HOH A 154 1954 105 HOH HOH . 
E 5 HOH A 155 1955 149 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 -17.049 -16.809 67.08 1 49.16 ? C1 GOL 1703 A 1 
HETATM 2 O O1 GOL . . . D 4 -17.901 -15.785 66.577 1 42.58 ? O1 GOL 1703 A 1 
HETATM 3 C C2 GOL . . . D 4 -17.286 -16.956 68.586 1 52.17 ? C2 GOL 1703 A 1 
HETATM 4 O O2 GOL . . . D 4 -18.432 -17.709 68.903 1 42.51 ? O2 GOL 1703 A 1 
HETATM 5 C C3 GOL . . . D 4 -16.027 -17.705 69.126 1 47.26 ? C3 GOL 1703 A 1 
HETATM 6 O O3 GOL . . . D 4 -15.078 -16.767 69.55 1 58.41 ? O3 GOL 1703 A 1 
HETATM 7 H H11 GOL . . . D 4 -16.111 -16.613 66.929 1 58.99 ? H11 GOL 1703 A 1 
HETATM 8 H H12 GOL . . . D 4 -17.214 -17.665 66.654 1 58.99 ? H12 GOL 1703 A 1 
HETATM 9 H HO1 GOL . . . D 4 -17.775 -15.74 65.72 1 51.1 ? HO1 GOL 1703 A 1 
HETATM 10 H H2 GOL . . . D 4 -17.404 -16.071 68.964 1 62.61 ? H2 GOL 1703 A 1 
HETATM 11 H HO2 GOL . . . D 4 -19.025 -17.587 68.312 1 51.01 ? HO2 GOL 1703 A 1 
HETATM 12 H H31 GOL . . . D 4 -15.696 -18.285 68.422 1 56.71 ? H31 GOL 1703 A 1 
HETATM 13 H H32 GOL . . . D 4 -16.312 -18.301 69.836 1 56.71 ? H32 GOL 1703 A 1 
HETATM 14 H HO3 GOL . . . D 4 -14.614 -16.577 68.857 1 70.09 ? HO3 GOL 1703 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#