data_7JK9
#
_model_server_result.job_id            BzeQPyRdMu4AHsUzRCWZvQ 
_model_server_result.datetime_utc      '2024-10-11 00:22:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jk9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"WD","auth_seq_id":503}' 
#
_entry.id    7JK9 
#
_exptl.entry_id    7JK9 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              787.158 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE 
_entity.pdbx_number_of_molecules    40 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    40-meric 
_pdbx_struct_assembly.oligomeric_count      40 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED,FD,GD,HD,ID,JD,KD,LD,MD,ND,OD,PD,QD,RD,SD,TD,UD,VD,WD,XD,YD,ZD,AE,BE,CE,DE,EE,FE,GE,HE,IE,JE,KE,LE,ME,NE,OE,PE,QE,RE,SE,TE,UE,VE,WE,XE,YE,ZE,AF,BF,CF,DF 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 QA N N 
? 4 TA N N 
? 4 WA N N 
? 4 ZA N N 
? 4 CB N N 
? 4 FB N N 
? 4 IB N N 
? 4 LB N N 
? 4 OB N N 
? 4 RB N N 
? 4 UB N N 
? 4 XB N N 
? 4 AC N N 
? 4 DC N N 
? 4 GC N N 
? 4 JC N N 
? 4 MC N N 
? 4 PC N N 
? 4 SC N N 
? 4 VC N N 
? 4 YC N N 
? 4 BD N N 
? 4 ED N N 
? 4 HD N N 
? 4 KD N N 
? 4 ND N N 
? 4 QD N N 
? 4 TD N N 
? 4 WD N N 
? 4 ZD N N 
? 4 CE N N 
? 4 FE N N 
? 4 IE N N 
? 4 LE N N 
? 4 OE N N 
? 4 RE N N 
? 4 UE N N 
? 4 XE N N 
? 4 AF N N 
? 4 DF N N 
#
_chem_comp.formula           'C45 H86 O10' 
_chem_comp.formula_weight    787.158 
_chem_comp.id                LMG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 LMG sing 192 n n 
C1 C2 LMG sing 193 n n 
C1 O6 LMG sing 194 n n 
C1 HC1 LMG sing 195 n n 
O1 C7 LMG sing 196 n n 
C2 O2 LMG sing 197 n n 
C2 C3 LMG sing 198 n n 
C2 HC2 LMG sing 199 n n 
O2 HO2 LMG sing 200 n n 
C3 O3 LMG sing 201 n n 
C3 C4 LMG sing 202 n n 
C3 HC3 LMG sing 203 n n 
O3 HO3 LMG sing 204 n n 
C4 O4 LMG sing 205 n n 
C4 C5 LMG sing 206 n n 
C4 HC4 LMG sing 207 n n 
O4 HO4 LMG sing 208 n n 
C5 C6 LMG sing 209 n n 
C5 O6 LMG sing 210 n n 
C5 HC5 LMG sing 211 n n 
O5 C6 LMG sing 212 n n 
O5 HO5 LMG sing 213 n n 
C6 HC61 LMG sing 214 n n 
C6 HC62 LMG sing 215 n n 
C7 C8 LMG sing 216 n n 
C7 HC71 LMG sing 217 n n 
C7 HC72 LMG sing 218 n n 
C8 C9 LMG sing 219 n n 
C8 O7 LMG sing 220 n n 
C8 HC8 LMG sing 221 n n 
C9 O8 LMG sing 222 n n 
C9 HC91 LMG sing 223 n n 
C9 HC92 LMG sing 224 n n 
O7 C10 LMG sing 225 n n 
C10 O9 LMG doub 226 n n 
C10 C11 LMG sing 227 n n 
C11 C12 LMG sing 228 n n 
C11 H111 LMG sing 229 n n 
C11 H112 LMG sing 230 n n 
C12 C13 LMG sing 231 n n 
C12 H121 LMG sing 232 n n 
C12 H122 LMG sing 233 n n 
C13 C14 LMG sing 234 n n 
C13 H131 LMG sing 235 n n 
C13 H132 LMG sing 236 n n 
C14 C15 LMG sing 237 n n 
C14 H141 LMG sing 238 n n 
C14 H142 LMG sing 239 n n 
C15 C16 LMG sing 240 n n 
C15 H151 LMG sing 241 n n 
C15 H152 LMG sing 242 n n 
C16 C17 LMG sing 243 n n 
C16 H161 LMG sing 244 n n 
C16 H162 LMG sing 245 n n 
C17 C18 LMG sing 246 n n 
C17 H171 LMG sing 247 n n 
C17 H172 LMG sing 248 n n 
C18 C19 LMG sing 249 n n 
C18 H181 LMG sing 250 n n 
C18 H182 LMG sing 251 n n 
C19 C20 LMG sing 252 n n 
C19 H191 LMG sing 253 n n 
C19 H192 LMG sing 254 n n 
C20 C21 LMG sing 255 n n 
C20 H201 LMG sing 256 n n 
C20 H202 LMG sing 257 n n 
C21 C22 LMG sing 258 n n 
C21 H211 LMG sing 259 n n 
C21 H212 LMG sing 260 n n 
C22 C23 LMG sing 261 n n 
C22 H221 LMG sing 262 n n 
C22 H222 LMG sing 263 n n 
C23 C24 LMG sing 264 n n 
C23 H231 LMG sing 265 n n 
C23 H232 LMG sing 266 n n 
C24 C25 LMG sing 267 n n 
C24 H241 LMG sing 268 n n 
C24 H242 LMG sing 269 n n 
C25 C26 LMG sing 270 n n 
C25 H251 LMG sing 271 n n 
C25 H252 LMG sing 272 n n 
C26 C27 LMG sing 273 n n 
C26 H261 LMG sing 274 n n 
C26 H262 LMG sing 275 n n 
C27 H271 LMG sing 276 n n 
C27 H272 LMG sing 277 n n 
C27 H273 LMG sing 278 n n 
O8 C28 LMG sing 279 n n 
C28 O10 LMG doub 280 n n 
C28 C29 LMG sing 281 n n 
C29 C30 LMG sing 282 n n 
C29 H291 LMG sing 283 n n 
C29 H292 LMG sing 284 n n 
C30 C31 LMG sing 285 n n 
C30 H301 LMG sing 286 n n 
C30 H302 LMG sing 287 n n 
C31 C32 LMG sing 288 n n 
C31 H311 LMG sing 289 n n 
C31 H312 LMG sing 290 n n 
C32 C33 LMG sing 291 n n 
C32 H321 LMG sing 292 n n 
C32 H322 LMG sing 293 n n 
C33 C34 LMG sing 294 n n 
C33 H331 LMG sing 295 n n 
C33 H332 LMG sing 296 n n 
C34 C35 LMG sing 297 n n 
C34 H341 LMG sing 298 n n 
C34 H342 LMG sing 299 n n 
C35 C36 LMG sing 300 n n 
C35 H351 LMG sing 301 n n 
C35 H352 LMG sing 302 n n 
C36 C37 LMG sing 303 n n 
C36 H361 LMG sing 304 n n 
C36 H362 LMG sing 305 n n 
C37 C38 LMG sing 306 n n 
C37 H371 LMG sing 307 n n 
C37 H372 LMG sing 308 n n 
C38 C39 LMG sing 309 n n 
C38 H381 LMG sing 310 n n 
C38 H382 LMG sing 311 n n 
C39 C40 LMG sing 312 n n 
C39 H391 LMG sing 313 n n 
C39 H392 LMG sing 314 n n 
C40 C41 LMG sing 315 n n 
C40 H401 LMG sing 316 n n 
C40 H402 LMG sing 317 n n 
C41 C42 LMG sing 318 n n 
C41 H411 LMG sing 319 n n 
C41 H412 LMG sing 320 n n 
C42 C43 LMG sing 321 n n 
C42 H421 LMG sing 322 n n 
C42 H422 LMG sing 323 n n 
C43 C44 LMG sing 324 n n 
C43 H431 LMG sing 325 n n 
C43 H432 LMG sing 326 n n 
C44 C45 LMG sing 327 n n 
C44 H441 LMG sing 328 n n 
C44 H442 LMG sing 329 n n 
C45 H451 LMG sing 330 n n 
C45 H452 LMG sing 331 n n 
C45 H453 LMG sing 332 n n 
#
_atom_sites.entry_id                     7JK9 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
OA 2 NDP A 1 501 500 NDP NDP . 
PA 3 PMR A 1 502 600 PMR PMR . 
QA 4 LMG A 1 503 700 LMG LMG . 
RA 2 NDP B 1 501 500 NDP NDP . 
SA 3 PMR B 1 502 600 PMR PMR . 
TA 4 LMG B 1 503 700 LMG LMG . 
UA 2 NDP C 1 501 500 NDP NDP . 
VA 3 PMR C 1 502 600 PMR PMR . 
WA 4 LMG C 1 503 700 LMG LMG . 
XA 2 NDP D 1 501 500 NDP NDP . 
YA 3 PMR D 1 502 600 PMR PMR . 
ZA 4 LMG D 1 503 700 LMG LMG . 
AB 2 NDP E 1 501 500 NDP NDP . 
BB 3 PMR E 1 502 600 PMR PMR . 
CB 4 LMG E 1 503 700 LMG LMG . 
DB 2 NDP F 1 501 500 NDP NDP . 
EB 3 PMR F 1 502 600 PMR PMR . 
FB 4 LMG F 1 503 700 LMG LMG . 
GB 2 NDP G 1 501 500 NDP NDP . 
HB 3 PMR G 1 502 600 PMR PMR . 
IB 4 LMG G 1 503 700 LMG LMG . 
JB 2 NDP H 1 501 500 NDP NDP . 
KB 3 PMR H 1 502 600 PMR PMR . 
LB 4 LMG H 1 503 700 LMG LMG . 
MB 2 NDP I 1 501 500 NDP NDP . 
NB 3 PMR I 1 502 600 PMR PMR . 
OB 4 LMG I 1 503 700 LMG LMG . 
PB 2 NDP J 1 501 500 NDP NDP . 
QB 3 PMR J 1 502 600 PMR PMR . 
RB 4 LMG J 1 503 700 LMG LMG . 
SB 2 NDP K 1 501 500 NDP NDP . 
TB 3 PMR K 1 502 600 PMR PMR . 
UB 4 LMG K 1 503 700 LMG LMG . 
VB 2 NDP L 1 501 500 NDP NDP . 
WB 3 PMR L 1 502 600 PMR PMR . 
XB 4 LMG L 1 503 700 LMG LMG . 
YB 2 NDP M 1 501 500 NDP NDP . 
ZB 3 PMR M 1 502 600 PMR PMR . 
AC 4 LMG M 1 503 700 LMG LMG . 
BC 2 NDP N 1 501 500 NDP NDP . 
CC 3 PMR N 1 502 600 PMR PMR . 
DC 4 LMG N 1 503 700 LMG LMG . 
EC 2 NDP O 1 501 500 NDP NDP . 
FC 3 PMR O 1 502 600 PMR PMR . 
GC 4 LMG O 1 503 700 LMG LMG . 
HC 2 NDP P 1 501 500 NDP NDP . 
IC 3 PMR P 1 502 600 PMR PMR . 
JC 4 LMG P 1 503 700 LMG LMG . 
KC 2 NDP Q 1 501 500 NDP NDP . 
LC 3 PMR Q 1 502 600 PMR PMR . 
MC 4 LMG Q 1 503 700 LMG LMG . 
NC 2 NDP R 1 501 500 NDP NDP . 
OC 3 PMR R 1 502 600 PMR PMR . 
PC 4 LMG R 1 503 700 LMG LMG . 
QC 2 NDP S 1 501 500 NDP NDP . 
RC 3 PMR S 1 502 600 PMR PMR . 
SC 4 LMG S 1 503 700 LMG LMG . 
TC 2 NDP T 1 501 500 NDP NDP . 
UC 3 PMR T 1 502 600 PMR PMR . 
VC 4 LMG T 1 503 700 LMG LMG . 
WC 2 NDP V 1 501 500 NDP NDP . 
XC 3 PMR V 1 502 600 PMR PMR . 
YC 4 LMG V 1 503 700 LMG LMG . 
ZC 2 NDP W 1 501 500 NDP NDP . 
AD 3 PMR W 1 502 600 PMR PMR . 
BD 4 LMG W 1 503 700 LMG LMG . 
CD 2 NDP X 1 501 500 NDP NDP . 
DD 3 PMR X 1 502 600 PMR PMR . 
ED 4 LMG X 1 503 700 LMG LMG . 
FD 2 NDP Y 1 501 500 NDP NDP . 
GD 3 PMR Y 1 502 600 PMR PMR . 
HD 4 LMG Y 1 503 700 LMG LMG . 
ID 2 NDP Z 1 501 500 NDP NDP . 
JD 3 PMR Z 1 502 600 PMR PMR . 
KD 4 LMG Z 1 503 700 LMG LMG . 
LD 2 NDP AA 1 501 500 NDP NDP . 
MD 3 PMR AA 1 502 600 PMR PMR . 
ND 4 LMG AA 1 503 700 LMG LMG . 
OD 2 NDP BA 1 501 500 NDP NDP . 
PD 3 PMR BA 1 502 600 PMR PMR . 
QD 4 LMG BA 1 503 700 LMG LMG . 
RD 2 NDP CA 1 501 500 NDP NDP . 
SD 3 PMR CA 1 502 600 PMR PMR . 
TD 4 LMG CA 1 503 700 LMG LMG . 
UD 2 NDP DA 1 501 500 NDP NDP . 
VD 3 PMR DA 1 502 600 PMR PMR . 
WD 4 LMG DA 1 503 700 LMG LMG . 
XD 2 NDP EA 1 501 500 NDP NDP . 
YD 3 PMR EA 1 502 600 PMR PMR . 
ZD 4 LMG EA 1 503 700 LMG LMG . 
AE 2 NDP FA 1 501 500 NDP NDP . 
BE 3 PMR FA 1 502 600 PMR PMR . 
CE 4 LMG FA 1 503 700 LMG LMG . 
DE 2 NDP GA 1 501 500 NDP NDP . 
EE 3 PMR GA 1 502 600 PMR PMR . 
FE 4 LMG GA 1 503 700 LMG LMG . 
GE 2 NDP HA 1 501 500 NDP NDP . 
HE 3 PMR HA 1 502 600 PMR PMR . 
IE 4 LMG HA 1 503 700 LMG LMG . 
JE 2 NDP IA 1 501 500 NDP NDP . 
KE 3 PMR IA 1 502 600 PMR PMR . 
LE 4 LMG IA 1 503 700 LMG LMG . 
ME 2 NDP JA 1 501 500 NDP NDP . 
NE 3 PMR JA 1 502 600 PMR PMR . 
OE 4 LMG JA 1 503 700 LMG LMG . 
PE 2 NDP KA 1 501 500 NDP NDP . 
QE 3 PMR KA 1 502 600 PMR PMR . 
RE 4 LMG KA 1 503 700 LMG LMG . 
SE 2 NDP LA 1 501 500 NDP NDP . 
TE 3 PMR LA 1 502 600 PMR PMR . 
UE 4 LMG LA 1 503 700 LMG LMG . 
VE 2 NDP MA 1 501 500 NDP NDP . 
WE 3 PMR MA 1 502 600 PMR PMR . 
XE 4 LMG MA 1 503 700 LMG LMG . 
YE 2 NDP NA 1 501 500 NDP NDP . 
ZE 3 PMR NA 1 502 600 PMR PMR . 
AF 4 LMG NA 1 503 700 LMG LMG . 
BF 2 NDP OA 1 501 500 NDP NDP . 
CF 3 PMR OA 1 502 600 PMR PMR . 
DF 4 LMG OA 1 503 700 LMG LMG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LMG . . . WD 4 227.932 150.24 235.892 1 76.99 ? C1 LMG 503 DA 1 
HETATM 2 O O1 LMG . . . WD 4 227.06 150.998 235.093 1 76.99 ? O1 LMG 503 DA 1 
HETATM 3 C C2 LMG . . . WD 4 227.877 150.888 237.279 1 76.99 ? C2 LMG 503 DA 1 
HETATM 4 O O2 LMG . . . WD 4 228.508 152.119 237.116 1 76.99 ? O2 LMG 503 DA 1 
HETATM 5 C C3 LMG . . . WD 4 228.766 150.013 238.18 1 76.99 ? C3 LMG 503 DA 1 
HETATM 6 O O3 LMG . . . WD 4 228.66 150.573 239.452 1 76.99 ? O3 LMG 503 DA 1 
HETATM 7 C C4 LMG . . . WD 4 228.194 148.587 238.2 1 76.99 ? C4 LMG 503 DA 1 
HETATM 8 O O4 LMG . . . WD 4 226.911 148.629 238.711 1 76.99 ? O4 LMG 503 DA 1 
HETATM 9 C C5 LMG . . . WD 4 228.101 148.101 236.738 1 76.99 ? C5 LMG 503 DA 1 
HETATM 10 O O5 LMG . . . WD 4 227.058 146.486 235.415 1 76.99 ? O5 LMG 503 DA 1 
HETATM 11 C C6 LMG . . . WD 4 227.427 146.724 236.736 1 76.99 ? C6 LMG 503 DA 1 
HETATM 12 O O6 LMG . . . WD 4 227.322 148.973 235.966 1 76.99 ? O6 LMG 503 DA 1 
HETATM 13 C C7 LMG . . . WD 4 227.713 151.967 234.304 1 76.99 ? C7 LMG 503 DA 1 
HETATM 14 C C8 LMG . . . WD 4 226.598 152.787 233.606 1 76.99 ? C8 LMG 503 DA 1 
HETATM 15 C C9 LMG . . . WD 4 225.258 152.447 234.259 1 76.99 ? C9 LMG 503 DA 1 
HETATM 16 O O7 LMG . . . WD 4 226.828 154.16 233.882 1 76.99 ? O7 LMG 503 DA 1 
HETATM 17 C C10 LMG . . . WD 4 226.81 155.052 232.856 1 76.99 ? C10 LMG 503 DA 1 
HETATM 18 O O9 LMG . . . WD 4 225.926 155.897 232.795 1 76.99 ? O9 LMG 503 DA 1 
HETATM 19 C C11 LMG . . . WD 4 227.913 154.831 231.878 1 76.99 ? C11 LMG 503 DA 1 
HETATM 20 O O8 LMG . . . WD 4 224.287 153.133 233.513 1 76.99 ? O8 LMG 503 DA 1 
HETATM 21 C C28 LMG . . . WD 4 223.791 152.481 232.44 1 76.99 ? C28 LMG 503 DA 1 
HETATM 22 O O10 LMG . . . WD 4 223.42 151.322 232.559 1 76.99 ? O10 LMG 503 DA 1 
HETATM 23 C C29 LMG . . . WD 4 223.866 153.247 231.163 1 76.99 ? C29 LMG 503 DA 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    560 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           23 
#