data_7JKY # _model_server_result.job_id sJeUinDpZQXBwLTgP_lnPw _model_server_result.datetime_utc '2025-01-10 20:55:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jky # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7JKY # _exptl.entry_id 7JKY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JKY _cell.length_a 38.196 _cell.length_b 42.303 _cell.length_c 91.235 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JKY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 2 A GLU 43 1_555 C NA NA . A NA 202 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc2 A O ASN 3 A ASN 44 1_555 C NA NA . A NA 202 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc3 C NA NA . A NA 202 1_555 D O HOH . A HOH 455 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7JKY _atom_sites.fract_transf_matrix[1][1] 0.026181 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023639 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YF6 A 1 201 201 YF6 YF6 . C 3 NA A 1 202 1 NA NA . D 4 HOH A 1 301 89 HOH HOH . D 4 HOH A 2 302 162 HOH HOH . D 4 HOH A 3 303 95 HOH HOH . D 4 HOH A 4 304 105 HOH HOH . D 4 HOH A 5 305 140 HOH HOH . D 4 HOH A 6 306 20 HOH HOH . D 4 HOH A 7 307 87 HOH HOH . D 4 HOH A 8 308 35 HOH HOH . D 4 HOH A 9 309 69 HOH HOH . D 4 HOH A 10 310 32 HOH HOH . D 4 HOH A 11 311 160 HOH HOH . D 4 HOH A 12 312 150 HOH HOH . D 4 HOH A 13 313 111 HOH HOH . D 4 HOH A 14 314 11 HOH HOH . D 4 HOH A 15 315 72 HOH HOH . D 4 HOH A 16 316 50 HOH HOH . D 4 HOH A 17 317 151 HOH HOH . D 4 HOH A 18 318 86 HOH HOH . D 4 HOH A 19 319 101 HOH HOH . D 4 HOH A 20 320 130 HOH HOH . D 4 HOH A 21 321 96 HOH HOH . D 4 HOH A 22 322 159 HOH HOH . D 4 HOH A 23 323 38 HOH HOH . D 4 HOH A 24 324 120 HOH HOH . D 4 HOH A 25 325 65 HOH HOH . D 4 HOH A 26 326 79 HOH HOH . D 4 HOH A 27 327 131 HOH HOH . D 4 HOH A 28 328 6 HOH HOH . D 4 HOH A 29 329 119 HOH HOH . D 4 HOH A 30 330 42 HOH HOH . D 4 HOH A 31 331 92 HOH HOH . D 4 HOH A 32 332 36 HOH HOH . D 4 HOH A 33 333 166 HOH HOH . D 4 HOH A 34 334 21 HOH HOH . D 4 HOH A 35 335 82 HOH HOH . D 4 HOH A 36 336 139 HOH HOH . D 4 HOH A 37 337 122 HOH HOH . D 4 HOH A 38 338 103 HOH HOH . D 4 HOH A 39 339 10 HOH HOH . D 4 HOH A 40 340 2 HOH HOH . D 4 HOH A 41 341 13 HOH HOH . D 4 HOH A 42 342 59 HOH HOH . D 4 HOH A 43 343 173 HOH HOH . D 4 HOH A 44 344 51 HOH HOH . D 4 HOH A 45 345 17 HOH HOH . D 4 HOH A 46 346 70 HOH HOH . D 4 HOH A 47 347 84 HOH HOH . D 4 HOH A 48 348 43 HOH HOH . D 4 HOH A 49 349 19 HOH HOH . D 4 HOH A 50 350 47 HOH HOH . D 4 HOH A 51 351 16 HOH HOH . D 4 HOH A 52 352 63 HOH HOH . D 4 HOH A 53 353 172 HOH HOH . D 4 HOH A 54 354 97 HOH HOH . D 4 HOH A 55 355 164 HOH HOH . D 4 HOH A 56 356 134 HOH HOH . D 4 HOH A 57 357 55 HOH HOH . D 4 HOH A 58 358 129 HOH HOH . D 4 HOH A 59 359 1 HOH HOH . D 4 HOH A 60 360 37 HOH HOH . D 4 HOH A 61 361 4 HOH HOH . D 4 HOH A 62 362 155 HOH HOH . D 4 HOH A 63 363 7 HOH HOH . D 4 HOH A 64 364 83 HOH HOH . D 4 HOH A 65 365 3 HOH HOH . D 4 HOH A 66 366 171 HOH HOH . D 4 HOH A 67 367 14 HOH HOH . D 4 HOH A 68 368 48 HOH HOH . D 4 HOH A 69 369 62 HOH HOH . D 4 HOH A 70 370 46 HOH HOH . D 4 HOH A 71 371 22 HOH HOH . D 4 HOH A 72 372 54 HOH HOH . D 4 HOH A 73 373 5 HOH HOH . D 4 HOH A 74 374 28 HOH HOH . D 4 HOH A 75 375 109 HOH HOH . D 4 HOH A 76 376 74 HOH HOH . D 4 HOH A 77 377 40 HOH HOH . D 4 HOH A 78 378 27 HOH HOH . D 4 HOH A 79 379 23 HOH HOH . D 4 HOH A 80 380 60 HOH HOH . D 4 HOH A 81 381 68 HOH HOH . D 4 HOH A 82 382 170 HOH HOH . D 4 HOH A 83 383 71 HOH HOH . D 4 HOH A 84 384 30 HOH HOH . D 4 HOH A 85 385 76 HOH HOH . D 4 HOH A 86 386 41 HOH HOH . D 4 HOH A 87 387 9 HOH HOH . D 4 HOH A 88 388 73 HOH HOH . D 4 HOH A 89 389 121 HOH HOH . D 4 HOH A 90 390 88 HOH HOH . D 4 HOH A 91 391 15 HOH HOH . D 4 HOH A 92 392 8 HOH HOH . D 4 HOH A 93 393 61 HOH HOH . D 4 HOH A 94 394 33 HOH HOH . D 4 HOH A 95 395 107 HOH HOH . D 4 HOH A 96 396 114 HOH HOH . D 4 HOH A 97 397 45 HOH HOH . D 4 HOH A 98 398 18 HOH HOH . D 4 HOH A 99 399 143 HOH HOH . D 4 HOH A 100 400 108 HOH HOH . D 4 HOH A 101 401 113 HOH HOH . D 4 HOH A 102 402 167 HOH HOH . D 4 HOH A 103 403 53 HOH HOH . D 4 HOH A 104 404 132 HOH HOH . D 4 HOH A 105 405 12 HOH HOH . D 4 HOH A 106 406 57 HOH HOH . D 4 HOH A 107 407 56 HOH HOH . D 4 HOH A 108 408 34 HOH HOH . D 4 HOH A 109 409 135 HOH HOH . D 4 HOH A 110 410 26 HOH HOH . D 4 HOH A 111 411 85 HOH HOH . D 4 HOH A 112 412 49 HOH HOH . D 4 HOH A 113 413 67 HOH HOH . D 4 HOH A 114 414 133 HOH HOH . D 4 HOH A 115 415 80 HOH HOH . D 4 HOH A 116 416 138 HOH HOH . D 4 HOH A 117 417 66 HOH HOH . D 4 HOH A 118 418 44 HOH HOH . D 4 HOH A 119 419 124 HOH HOH . D 4 HOH A 120 420 127 HOH HOH . D 4 HOH A 121 421 99 HOH HOH . D 4 HOH A 122 422 29 HOH HOH . D 4 HOH A 123 423 118 HOH HOH . D 4 HOH A 124 424 64 HOH HOH . D 4 HOH A 125 425 39 HOH HOH . D 4 HOH A 126 426 142 HOH HOH . D 4 HOH A 127 427 137 HOH HOH . D 4 HOH A 128 428 128 HOH HOH . D 4 HOH A 129 429 141 HOH HOH . D 4 HOH A 130 430 75 HOH HOH . D 4 HOH A 131 431 81 HOH HOH . D 4 HOH A 132 432 104 HOH HOH . D 4 HOH A 133 433 52 HOH HOH . D 4 HOH A 134 434 168 HOH HOH . D 4 HOH A 135 435 110 HOH HOH . D 4 HOH A 136 436 115 HOH HOH . D 4 HOH A 137 437 116 HOH HOH . D 4 HOH A 138 438 161 HOH HOH . D 4 HOH A 139 439 112 HOH HOH . D 4 HOH A 140 440 163 HOH HOH . D 4 HOH A 141 441 93 HOH HOH . D 4 HOH A 142 442 149 HOH HOH . D 4 HOH A 143 443 24 HOH HOH . D 4 HOH A 144 444 31 HOH HOH . D 4 HOH A 145 445 154 HOH HOH . D 4 HOH A 146 446 78 HOH HOH . D 4 HOH A 147 447 100 HOH HOH . D 4 HOH A 148 448 25 HOH HOH . D 4 HOH A 149 449 144 HOH HOH . D 4 HOH A 150 450 90 HOH HOH . D 4 HOH A 151 451 102 HOH HOH . D 4 HOH A 152 452 147 HOH HOH . D 4 HOH A 153 453 125 HOH HOH . D 4 HOH A 154 454 91 HOH HOH . D 4 HOH A 155 455 165 HOH HOH . D 4 HOH A 156 456 117 HOH HOH . D 4 HOH A 157 457 58 HOH HOH . D 4 HOH A 158 458 136 HOH HOH . D 4 HOH A 159 459 156 HOH HOH . D 4 HOH A 160 460 148 HOH HOH . D 4 HOH A 161 461 123 HOH HOH . D 4 HOH A 162 462 98 HOH HOH . D 4 HOH A 163 463 77 HOH HOH . D 4 HOH A 164 464 157 HOH HOH . D 4 HOH A 165 465 145 HOH HOH . D 4 HOH A 166 466 106 HOH HOH . D 4 HOH A 167 467 153 HOH HOH . D 4 HOH A 168 468 146 HOH HOH . D 4 HOH A 169 469 152 HOH HOH . D 4 HOH A 170 470 158 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -2.668 _atom_site.Cartn_y 3.709 _atom_site.Cartn_z 29.481 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 431 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #