data_7JLJ # _model_server_result.job_id MHJtRy-MvFw4MKEFRot3tA _model_server_result.datetime_utc '2024-12-05 00:12:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jlj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7JLJ # _exptl.entry_id 7JLJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 405.96 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Clomifene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JLJ _cell.length_a 58.501 _cell.length_b 58.501 _cell.length_c 161.858 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JLJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -80.929 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H28 Cl N O' _chem_comp.formula_weight 405.96 _chem_comp.id 53Q _chem_comp.mon_nstd_flag . _chem_comp.name Clomifene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-[(E)-2-chloro-1,2-diphenylethenyl]-4-methoxybenzene;clomiphene # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 O 53Q sing 1 n n O C6 53Q sing 2 n n C6 C11 53Q doub 3 n y C6 C7 53Q sing 4 n y C11 C10 53Q sing 5 n y C7 C8 53Q doub 6 n y C10 C9 53Q doub 7 n y C8 C9 53Q sing 8 n y C24 C25 53Q doub 9 n y C24 C23 53Q sing 10 n y C25 C20 53Q sing 11 n y C9 C12 53Q sing 12 n n C23 C22 53Q doub 13 n y C20 C12 53Q sing 14 n n C20 C21 53Q doub 15 n y C12 C13 53Q doub 16 e n C22 C21 53Q sing 17 n y C13 C14 53Q sing 18 n n C13 CL 53Q sing 19 n n C15 C14 53Q doub 20 n y C15 C16 53Q sing 21 n y C14 C19 53Q sing 22 n y C16 C17 53Q doub 23 n y C19 C18 53Q doub 24 n y C17 C18 53Q sing 25 n y C5 H1 53Q sing 26 n n C5 H2 53Q sing 27 n n C7 H4 53Q sing 28 n n C8 H5 53Q sing 29 n n C10 H6 53Q sing 30 n n C11 H7 53Q sing 31 n n C15 H8 53Q sing 32 n n C19 H9 53Q sing 33 n n C18 H10 53Q sing 34 n n C17 H11 53Q sing 35 n n C16 H12 53Q sing 36 n n C25 H13 53Q sing 37 n n C24 H14 53Q sing 38 n n C23 H15 53Q sing 39 n n C22 H16 53Q sing 40 n n C21 H17 53Q sing 41 n n C5 C4 53Q sing 42 n n C4 N1 53Q sing 43 n n N1 C3 53Q sing 44 n n C3 C2 53Q sing 45 n n N1 C26 53Q sing 46 n n C26 C27 53Q sing 47 n n C4 H3 53Q sing 48 n n C4 H18 53Q sing 49 n n C3 H19 53Q sing 50 n n C3 H20 53Q sing 51 n n C2 H21 53Q sing 52 n n C2 H22 53Q sing 53 n n C2 H23 53Q sing 54 n n C26 H24 53Q sing 55 n n C26 H25 53Q sing 56 n n C27 H26 53Q sing 57 n n C27 H27 53Q sing 58 n n C27 H28 53Q sing 59 n n # _atom_sites.entry_id 7JLJ _atom_sites.fract_transf_matrix[1][1] 0.017094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 53Q A 1 301 301 53Q Cph . C 3 HOH A 1 401 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 53Q . . . B 2 -11.811 11.366 -17.874 1 57.3 ? C5 53Q 301 A 1 HETATM 2 C C6 53Q . . . B 2 -9.413 10.749 -18.087 1 66.79 ? C6 53Q 301 A 1 HETATM 3 C C7 53Q . . . B 2 -8.696 10.719 -19.307 1 69.71 ? C7 53Q 301 A 1 HETATM 4 C C8 53Q . . . B 2 -7.337 11.17 -19.335 1 66.66 ? C8 53Q 301 A 1 HETATM 5 C C9 53Q . . . B 2 -6.712 11.617 -18.149 1 60.27 ? C9 53Q 301 A 1 HETATM 6 C C10 53Q . . . B 2 -7.426 11.632 -16.919 1 83.61 ? C10 53Q 301 A 1 HETATM 7 C C11 53Q . . . B 2 -8.778 11.208 -16.911 1 79.4 ? C11 53Q 301 A 1 HETATM 8 C C12 53Q . . . B 2 -5.326 12.187 -17.967 1 61.85 ? C12 53Q 301 A 1 HETATM 9 C C13 53Q . . . B 2 -4.125 11.586 -17.947 1 59.69 ? C13 53Q 301 A 1 HETATM 10 C C14 53Q . . . B 2 -3.999 10.09 -18.283 1 50.26 ? C14 53Q 301 A 1 HETATM 11 C C15 53Q . . . B 2 -3.093 9.936 -19.337 1 49.51 ? C15 53Q 301 A 1 HETATM 12 CL CL 53Q . . . B 2 -2.693 12.706 -17.624 1 64.15 ? CL 53Q 301 A 1 HETATM 13 C C19 53Q . . . B 2 -4.733 9.011 -17.744 1 59.24 ? C19 53Q 301 A 1 HETATM 14 C C18 53Q . . . B 2 -4.447 7.727 -18.288 1 60.85 ? C18 53Q 301 A 1 HETATM 15 C C17 53Q . . . B 2 -3.487 7.55 -19.315 1 48.16 ? C17 53Q 301 A 1 HETATM 16 C C16 53Q . . . B 2 -2.812 8.658 -19.822 1 52.55 ? C16 53Q 301 A 1 HETATM 17 C C20 53Q . . . B 2 -5.305 13.696 -17.743 1 70.15 ? C20 53Q 301 A 1 HETATM 18 C C25 53Q . . . B 2 -5.675 14.457 -18.87 1 73.57 ? C25 53Q 301 A 1 HETATM 19 C C24 53Q . . . B 2 -5.726 15.861 -18.761 1 74.32 ? C24 53Q 301 A 1 HETATM 20 C C23 53Q . . . B 2 -5.362 16.625 -17.637 1 65.16 ? C23 53Q 301 A 1 HETATM 21 C C22 53Q . . . B 2 -4.933 15.854 -16.556 1 74.83 ? C22 53Q 301 A 1 HETATM 22 C C21 53Q . . . B 2 -4.91 14.422 -16.59 1 78.72 ? C21 53Q 301 A 1 HETATM 23 O O 53Q . . . B 2 -10.762 10.355 -17.931 1 58.11 ? O 53Q 301 A 1 HETATM 24 C C4 53Q . . . B 2 -12.862 10.977 -18.947 1 64.27 ? C4 53Q 301 A 1 HETATM 25 N N1 53Q . . . B 2 -13.293 9.59 -18.644 1 64.79 ? N1 53Q 301 A 1 HETATM 26 C C3 53Q . . . B 2 -13.786 9.649 -17.246 1 80.45 ? C3 53Q 301 A 1 HETATM 27 C C2 53Q . . . B 2 -13.683 8.334 -16.511 1 73.25 ? C2 53Q 301 A 1 HETATM 28 C C26 53Q . . . B 2 -14.326 9.231 -19.623 1 64.52 ? C26 53Q 301 A 1 HETATM 29 C C27 53Q . . . B 2 -14.67 7.754 -19.51 1 56.5 ? C27 53Q 301 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 29 #