data_7JLM # _model_server_result.job_id 9jtsSXPPlCLXRDiSKzfa8w _model_server_result.datetime_utc '2024-11-15 05:28:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jlm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7JLM # _exptl.entry_id 7JLM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JLM _cell.length_a 85.724 _cell.length_b 87.4 _cell.length_c 159.024 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JLM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1,2 B,E,F,H 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -79.512 3 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 7JLM _atom_sites.fract_transf_matrix[1][1] 0.011665 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011442 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 301 301 CIT CIT . D 3 V07 A 1 302 2 V07 MAC . E 2 CIT B 1 301 301 CIT CIT . F 3 V07 B 1 302 1 V07 MAC . G 4 HOH A 1 401 46 HOH HOH . G 4 HOH A 2 402 58 HOH HOH . G 4 HOH A 3 403 72 HOH HOH . G 4 HOH A 4 404 74 HOH HOH . G 4 HOH A 5 405 5 HOH HOH . G 4 HOH A 6 406 12 HOH HOH . G 4 HOH A 7 407 25 HOH HOH . G 4 HOH A 8 408 35 HOH HOH . G 4 HOH A 9 409 19 HOH HOH . G 4 HOH A 10 410 54 HOH HOH . G 4 HOH A 11 411 15 HOH HOH . G 4 HOH A 12 412 65 HOH HOH . G 4 HOH A 13 413 2 HOH HOH . G 4 HOH A 14 414 45 HOH HOH . G 4 HOH A 15 415 57 HOH HOH . G 4 HOH A 16 416 71 HOH HOH . G 4 HOH A 17 417 34 HOH HOH . G 4 HOH A 18 418 38 HOH HOH . G 4 HOH A 19 419 56 HOH HOH . G 4 HOH A 20 420 40 HOH HOH . G 4 HOH A 21 421 1 HOH HOH . G 4 HOH A 22 422 26 HOH HOH . G 4 HOH A 23 423 3 HOH HOH . G 4 HOH A 24 424 22 HOH HOH . G 4 HOH A 25 425 69 HOH HOH . G 4 HOH A 26 426 52 HOH HOH . G 4 HOH A 27 427 66 HOH HOH . G 4 HOH A 28 428 42 HOH HOH . G 4 HOH A 29 429 63 HOH HOH . G 4 HOH A 30 430 59 HOH HOH . G 4 HOH A 31 431 28 HOH HOH . G 4 HOH A 32 432 33 HOH HOH . G 4 HOH A 33 433 41 HOH HOH . G 4 HOH A 34 434 64 HOH HOH . G 4 HOH A 35 435 81 HOH HOH . G 4 HOH A 36 436 27 HOH HOH . G 4 HOH A 37 437 39 HOH HOH . G 4 HOH A 38 438 9 HOH HOH . G 4 HOH A 39 439 48 HOH HOH . G 4 HOH A 40 440 21 HOH HOH . G 4 HOH A 41 441 31 HOH HOH . G 4 HOH A 42 442 30 HOH HOH . G 4 HOH A 43 443 10 HOH HOH . G 4 HOH A 44 444 50 HOH HOH . G 4 HOH A 45 445 43 HOH HOH . G 4 HOH A 46 446 80 HOH HOH . G 4 HOH A 47 447 76 HOH HOH . G 4 HOH A 48 448 77 HOH HOH . H 4 HOH B 1 401 8 HOH HOH . H 4 HOH B 2 402 82 HOH HOH . H 4 HOH B 3 403 61 HOH HOH . H 4 HOH B 4 404 53 HOH HOH . H 4 HOH B 5 405 62 HOH HOH . H 4 HOH B 6 406 18 HOH HOH . H 4 HOH B 7 407 24 HOH HOH . H 4 HOH B 8 408 17 HOH HOH . H 4 HOH B 9 409 14 HOH HOH . H 4 HOH B 10 410 4 HOH HOH . H 4 HOH B 11 411 20 HOH HOH . H 4 HOH B 12 412 23 HOH HOH . H 4 HOH B 13 413 16 HOH HOH . H 4 HOH B 14 414 73 HOH HOH . H 4 HOH B 15 415 55 HOH HOH . H 4 HOH B 16 416 7 HOH HOH . H 4 HOH B 17 417 37 HOH HOH . H 4 HOH B 18 418 70 HOH HOH . H 4 HOH B 19 419 78 HOH HOH . H 4 HOH B 20 420 11 HOH HOH . H 4 HOH B 21 421 13 HOH HOH . H 4 HOH B 22 422 60 HOH HOH . H 4 HOH B 23 423 83 HOH HOH . H 4 HOH B 24 424 36 HOH HOH . H 4 HOH B 25 425 6 HOH HOH . H 4 HOH B 26 426 44 HOH HOH . H 4 HOH B 27 427 49 HOH HOH . H 4 HOH B 28 428 67 HOH HOH . H 4 HOH B 29 429 84 HOH HOH . H 4 HOH B 30 430 32 HOH HOH . H 4 HOH B 31 431 68 HOH HOH . H 4 HOH B 32 432 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . E 2 33.367 5.241 -19.284 1 124.68 ? C1 CIT 301 B 1 HETATM 2 O O1 CIT . . . E 2 32.715 5.845 -20.134 1 119.95 ? O1 CIT 301 B 1 HETATM 3 O O2 CIT . . . E 2 33.315 4.009 -19.162 1 120.31 ? O2 CIT 301 B 1 HETATM 4 C C2 CIT . . . E 2 34.135 6.108 -18.289 1 132.95 ? C2 CIT 301 B 1 HETATM 5 C C3 CIT . . . E 2 35.477 5.646 -17.698 1 139.02 ? C3 CIT 301 B 1 HETATM 6 O O7 CIT . . . E 2 35.582 6.169 -16.385 1 141.93 ? O7 CIT 301 B 1 HETATM 7 C C4 CIT . . . E 2 36.659 6.165 -18.531 1 132.67 ? C4 CIT 301 B 1 HETATM 8 C C5 CIT . . . E 2 37.888 6.63 -17.747 1 127.48 ? C5 CIT 301 B 1 HETATM 9 O O3 CIT . . . E 2 38.157 7.841 -17.739 1 123.77 ? O3 CIT 301 B 1 HETATM 10 O O4 CIT . . . E 2 38.57 5.802 -17.155 1 123.22 ? O4 CIT 301 B 1 HETATM 11 C C6 CIT . . . E 2 35.52 4.112 -17.627 1 142.94 ? C6 CIT 301 B 1 HETATM 12 O O5 CIT . . . E 2 36.455 3.56 -18.154 1 140.9 ? O5 CIT 301 B 1 HETATM 13 O O6 CIT . . . E 2 34.614 3.555 -17.02 1 145.63 ? O6 CIT 301 B 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 13 #