data_7JO8 # _model_server_result.job_id 2goxMbKOF9uD_k8mUI3F7A _model_server_result.datetime_utc '2024-11-04 22:47:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jo8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7JO8 # _exptl.entry_id 7JO8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.56 _cell.angle_gamma 90 _cell.entry_id 7JO8 _cell.length_a 79.322 _cell.length_b 79.221 _cell.length_c 40.616 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JO8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 89 A CYS 89 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.122 ? disulf ? disulf2 B SG CYS 23 B CYS 23 1_555 B SG CYS 89 B CYS 89 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.108 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 7JO8 _atom_sites.fract_transf_matrix[1][1] 0.012607 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004479 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026129 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1PE A 1 401 2 1PE PE5 . D 3 MLI A 1 402 1 MLI MLI . E 4 PG4 B 1 401 1 PG4 PEG . F 5 HOH A 1 501 160 HOH HOH . F 5 HOH A 2 502 157 HOH HOH . F 5 HOH A 3 503 107 HOH HOH . F 5 HOH A 4 504 224 HOH HOH . F 5 HOH A 5 505 175 HOH HOH . F 5 HOH A 6 506 192 HOH HOH . F 5 HOH A 7 507 86 HOH HOH . F 5 HOH A 8 508 40 HOH HOH . F 5 HOH A 9 509 62 HOH HOH . F 5 HOH A 10 510 99 HOH HOH . F 5 HOH A 11 511 46 HOH HOH . F 5 HOH A 12 512 42 HOH HOH . F 5 HOH A 13 513 6 HOH HOH . F 5 HOH A 14 514 124 HOH HOH . F 5 HOH A 15 515 154 HOH HOH . F 5 HOH A 16 516 132 HOH HOH . F 5 HOH A 17 517 27 HOH HOH . F 5 HOH A 18 518 136 HOH HOH . F 5 HOH A 19 519 69 HOH HOH . F 5 HOH A 20 520 194 HOH HOH . F 5 HOH A 21 521 23 HOH HOH . F 5 HOH A 22 522 183 HOH HOH . F 5 HOH A 23 523 166 HOH HOH . F 5 HOH A 24 524 149 HOH HOH . F 5 HOH A 25 525 63 HOH HOH . F 5 HOH A 26 526 11 HOH HOH . F 5 HOH A 27 527 55 HOH HOH . F 5 HOH A 28 528 113 HOH HOH . F 5 HOH A 29 529 120 HOH HOH . F 5 HOH A 30 530 20 HOH HOH . F 5 HOH A 31 531 163 HOH HOH . F 5 HOH A 32 532 125 HOH HOH . F 5 HOH A 33 533 57 HOH HOH . F 5 HOH A 34 534 8 HOH HOH . F 5 HOH A 35 535 1 HOH HOH . F 5 HOH A 36 536 127 HOH HOH . F 5 HOH A 37 537 67 HOH HOH . F 5 HOH A 38 538 2 HOH HOH . F 5 HOH A 39 539 43 HOH HOH . F 5 HOH A 40 540 172 HOH HOH . F 5 HOH A 41 541 189 HOH HOH . F 5 HOH A 42 542 110 HOH HOH . F 5 HOH A 43 543 162 HOH HOH . F 5 HOH A 44 544 28 HOH HOH . F 5 HOH A 45 545 7 HOH HOH . F 5 HOH A 46 546 104 HOH HOH . F 5 HOH A 47 547 77 HOH HOH . F 5 HOH A 48 548 92 HOH HOH . F 5 HOH A 49 549 122 HOH HOH . F 5 HOH A 50 550 54 HOH HOH . F 5 HOH A 51 551 45 HOH HOH . F 5 HOH A 52 552 114 HOH HOH . F 5 HOH A 53 553 225 HOH HOH . F 5 HOH A 54 554 205 HOH HOH . F 5 HOH A 55 555 5 HOH HOH . F 5 HOH A 56 556 32 HOH HOH . F 5 HOH A 57 557 106 HOH HOH . F 5 HOH A 58 558 26 HOH HOH . F 5 HOH A 59 559 135 HOH HOH . F 5 HOH A 60 560 88 HOH HOH . F 5 HOH A 61 561 51 HOH HOH . F 5 HOH A 62 562 15 HOH HOH . F 5 HOH A 63 563 74 HOH HOH . F 5 HOH A 64 564 47 HOH HOH . F 5 HOH A 65 565 193 HOH HOH . F 5 HOH A 66 566 146 HOH HOH . F 5 HOH A 67 567 38 HOH HOH . F 5 HOH A 68 568 214 HOH HOH . F 5 HOH A 69 569 170 HOH HOH . F 5 HOH A 70 570 159 HOH HOH . F 5 HOH A 71 571 144 HOH HOH . F 5 HOH A 72 572 210 HOH HOH . F 5 HOH A 73 573 65 HOH HOH . F 5 HOH A 74 574 150 HOH HOH . F 5 HOH A 75 575 176 HOH HOH . F 5 HOH A 76 576 145 HOH HOH . F 5 HOH A 77 577 61 HOH HOH . F 5 HOH A 78 578 219 HOH HOH . F 5 HOH A 79 579 217 HOH HOH . F 5 HOH A 80 580 140 HOH HOH . F 5 HOH A 81 581 229 HOH HOH . F 5 HOH A 82 582 228 HOH HOH . F 5 HOH A 83 583 152 HOH HOH . F 5 HOH A 84 584 197 HOH HOH . F 5 HOH A 85 585 109 HOH HOH . F 5 HOH A 86 586 89 HOH HOH . F 5 HOH A 87 587 133 HOH HOH . F 5 HOH A 88 588 208 HOH HOH . F 5 HOH A 89 589 97 HOH HOH . F 5 HOH A 90 590 131 HOH HOH . F 5 HOH A 91 591 177 HOH HOH . F 5 HOH A 92 592 58 HOH HOH . F 5 HOH A 93 593 102 HOH HOH . F 5 HOH A 94 594 167 HOH HOH . F 5 HOH A 95 595 137 HOH HOH . G 5 HOH B 1 501 181 HOH HOH . G 5 HOH B 2 502 227 HOH HOH . G 5 HOH B 3 503 178 HOH HOH . G 5 HOH B 4 504 161 HOH HOH . G 5 HOH B 5 505 49 HOH HOH . G 5 HOH B 6 506 190 HOH HOH . G 5 HOH B 7 507 34 HOH HOH . G 5 HOH B 8 508 226 HOH HOH . G 5 HOH B 9 509 41 HOH HOH . G 5 HOH B 10 510 95 HOH HOH . G 5 HOH B 11 511 223 HOH HOH . G 5 HOH B 12 512 33 HOH HOH . G 5 HOH B 13 513 141 HOH HOH . G 5 HOH B 14 514 56 HOH HOH . G 5 HOH B 15 515 50 HOH HOH . G 5 HOH B 16 516 171 HOH HOH . G 5 HOH B 17 517 60 HOH HOH . G 5 HOH B 18 518 83 HOH HOH . G 5 HOH B 19 519 117 HOH HOH . G 5 HOH B 20 520 71 HOH HOH . G 5 HOH B 21 521 21 HOH HOH . G 5 HOH B 22 522 37 HOH HOH . G 5 HOH B 23 523 79 HOH HOH . G 5 HOH B 24 524 64 HOH HOH . G 5 HOH B 25 525 75 HOH HOH . G 5 HOH B 26 526 25 HOH HOH . G 5 HOH B 27 527 101 HOH HOH . G 5 HOH B 28 528 18 HOH HOH . G 5 HOH B 29 529 29 HOH HOH . G 5 HOH B 30 530 48 HOH HOH . G 5 HOH B 31 531 142 HOH HOH . G 5 HOH B 32 532 100 HOH HOH . G 5 HOH B 33 533 12 HOH HOH . G 5 HOH B 34 534 78 HOH HOH . G 5 HOH B 35 535 165 HOH HOH . G 5 HOH B 36 536 59 HOH HOH . G 5 HOH B 37 537 105 HOH HOH . G 5 HOH B 38 538 22 HOH HOH . G 5 HOH B 39 539 3 HOH HOH . G 5 HOH B 40 540 16 HOH HOH . G 5 HOH B 41 541 82 HOH HOH . G 5 HOH B 42 542 103 HOH HOH . G 5 HOH B 43 543 128 HOH HOH . G 5 HOH B 44 544 94 HOH HOH . G 5 HOH B 45 545 4 HOH HOH . G 5 HOH B 46 546 85 HOH HOH . G 5 HOH B 47 547 139 HOH HOH . G 5 HOH B 48 548 44 HOH HOH . G 5 HOH B 49 549 164 HOH HOH . G 5 HOH B 50 550 108 HOH HOH . G 5 HOH B 51 551 9 HOH HOH . G 5 HOH B 52 552 153 HOH HOH . G 5 HOH B 53 553 30 HOH HOH . G 5 HOH B 54 554 93 HOH HOH . G 5 HOH B 55 555 81 HOH HOH . G 5 HOH B 56 556 10 HOH HOH . G 5 HOH B 57 557 209 HOH HOH . G 5 HOH B 58 558 52 HOH HOH . G 5 HOH B 59 559 68 HOH HOH . G 5 HOH B 60 560 129 HOH HOH . G 5 HOH B 61 561 35 HOH HOH . G 5 HOH B 62 562 73 HOH HOH . G 5 HOH B 63 563 187 HOH HOH . G 5 HOH B 64 564 76 HOH HOH . G 5 HOH B 65 565 173 HOH HOH . G 5 HOH B 66 566 90 HOH HOH . G 5 HOH B 67 567 36 HOH HOH . G 5 HOH B 68 568 31 HOH HOH . G 5 HOH B 69 569 70 HOH HOH . G 5 HOH B 70 570 200 HOH HOH . G 5 HOH B 71 571 116 HOH HOH . G 5 HOH B 72 572 17 HOH HOH . G 5 HOH B 73 573 72 HOH HOH . G 5 HOH B 74 574 130 HOH HOH . G 5 HOH B 75 575 180 HOH HOH . G 5 HOH B 76 576 143 HOH HOH . G 5 HOH B 77 577 66 HOH HOH . G 5 HOH B 78 578 53 HOH HOH . G 5 HOH B 79 579 84 HOH HOH . G 5 HOH B 80 580 215 HOH HOH . G 5 HOH B 81 581 19 HOH HOH . G 5 HOH B 82 582 39 HOH HOH . G 5 HOH B 83 583 115 HOH HOH . G 5 HOH B 84 584 24 HOH HOH . G 5 HOH B 85 585 147 HOH HOH . G 5 HOH B 86 586 13 HOH HOH . G 5 HOH B 87 587 112 HOH HOH . G 5 HOH B 88 588 188 HOH HOH . G 5 HOH B 89 589 96 HOH HOH . G 5 HOH B 90 590 199 HOH HOH . G 5 HOH B 91 591 80 HOH HOH . G 5 HOH B 92 592 203 HOH HOH . G 5 HOH B 93 593 118 HOH HOH . G 5 HOH B 94 594 14 HOH HOH . G 5 HOH B 95 595 134 HOH HOH . G 5 HOH B 96 596 156 HOH HOH . G 5 HOH B 97 597 121 HOH HOH . G 5 HOH B 98 598 91 HOH HOH . G 5 HOH B 99 599 182 HOH HOH . G 5 HOH B 100 600 174 HOH HOH . G 5 HOH B 101 601 213 HOH HOH . G 5 HOH B 102 602 151 HOH HOH . G 5 HOH B 103 603 185 HOH HOH . G 5 HOH B 104 604 179 HOH HOH . G 5 HOH B 105 605 169 HOH HOH . G 5 HOH B 106 606 138 HOH HOH . G 5 HOH B 107 607 111 HOH HOH . G 5 HOH B 108 608 87 HOH HOH . G 5 HOH B 109 609 204 HOH HOH . G 5 HOH B 110 610 148 HOH HOH . G 5 HOH B 111 611 202 HOH HOH . G 5 HOH B 112 612 158 HOH HOH . G 5 HOH B 113 613 184 HOH HOH . G 5 HOH B 114 614 98 HOH HOH . G 5 HOH B 115 615 155 HOH HOH . G 5 HOH B 116 616 123 HOH HOH . G 5 HOH B 117 617 119 HOH HOH . G 5 HOH B 118 618 168 HOH HOH . G 5 HOH B 119 619 126 HOH HOH . G 5 HOH B 120 620 206 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . C 2 0.614 20.653 7.925 1 51.66 ? OH2 1PE 401 A 1 HETATM 2 C C12 1PE . . . C 2 -0.753 20.896 7.567 1 53.92 ? C12 1PE 401 A 1 HETATM 3 C C22 1PE . . . C 2 -0.78 21.541 6.189 1 59.67 ? C22 1PE 401 A 1 HETATM 4 O OH3 1PE . . . C 2 -0.131 22.815 6.235 1 60.8 ? OH3 1PE 401 A 1 HETATM 5 C C13 1PE . . . C 2 -0.439 25.185 6.659 1 38.1 ? C13 1PE 401 A 1 HETATM 6 C C23 1PE . . . C 2 -1.096 23.834 6.45 1 54.75 ? C23 1PE 401 A 1 HETATM 7 O OH4 1PE . . . C 2 0.576 25.097 7.648 1 29.44 ? OH4 1PE 401 A 1 HETATM 8 C C14 1PE . . . C 2 2.021 26.358 8.726 1 40.02 ? C14 1PE 401 A 1 HETATM 9 C C24 1PE . . . C 2 0.548 26.207 8.485 1 23.64 ? C24 1PE 401 A 1 HETATM 10 O OH5 1PE . . . C 2 2.244 26.483 10.09 1 36.76 ? OH5 1PE 401 A 1 HETATM 11 C C15 1PE . . . C 2 3.461 25.134 11.466 1 24.27 ? C15 1PE 401 A 1 HETATM 12 C C25 1PE . . . C 2 2.205 25.233 10.667 1 19.27 ? C25 1PE 401 A 1 HETATM 13 O OH6 1PE . . . C 2 3.383 24.032 12.327 1 34.61 ? OH6 1PE 401 A 1 HETATM 14 C C16 1PE . . . C 2 4.73 22.155 11.602 1 34.27 ? C16 1PE 401 A 1 HETATM 15 C C26 1PE . . . C 2 3.365 22.806 11.617 1 22.88 ? C26 1PE 401 A 1 HETATM 16 O OH7 1PE . . . C 2 4.667 21.121 10.616 1 48.83 ? OH7 1PE 401 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #