data_7JPX # _model_server_result.job_id -QHvBbxiILDuhU4sVVNDkg _model_server_result.datetime_utc '2024-11-04 22:46:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jpx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1912}' # _entry.id 7JPX # _exptl.entry_id 7JPX _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JPX _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JPX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 226 A CYS 226 1_555 A SG CYS 254 A CYS 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf2 A SG CYS 245 A CYS 245 1_555 A SG CYS 261 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 957 A CYS 957 1_555 A SG CYS 968 A CYS 968 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf4 A SG CYS 1338 A CYS 1338 1_555 A SG CYS 1352 A CYS 1352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 57 E CYS 57 1_555 B SG CYS 80 E CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 C SG CYS 305 F CYS 305 1_555 C SG CYS 1046 F CYS 1047 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 C SG CYS 356 F CYS 356 1_555 C SG CYS 1061 F CYS 1062 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf8 C SG CYS 406 F CYS 406 1_555 C SG CYS 1073 F CYS 1074 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf9 C SG CYS 669 F CYS 670 1_555 C SG CYS 699 F CYS 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf10 C SG CYS 843 F CYS 844 1_555 C SG CYS 852 F CYS 853 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf11 C SG CYS 906 F CYS 907 1_555 C SG CYS 976 F CYS 977 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 C SG CYS 998 F CYS 999 1_555 C SG CYS 1028 F CYS 1029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 C SG CYS 1001 F CYS 1002 1_555 C SG CYS 1026 F CYS 1027 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE1 GLU 292 A GLU 292 1_555 D CA CA . A CA 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? metalc ? metalc2 A OE1 GLU 614 A GLU 614 1_555 D CA CA . A CA 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc3 A OE1 GLU 1014 A GLU 1014 1_555 D CA CA . A CA 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? metalc ? metalc4 A OE2 GLU 1014 A GLU 1014 1_555 D CA CA . A CA 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # _atom_sites.entry_id 7JPX _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA A 1 1901 1902 CA CA . E 5 3PE A 1 1902 1903 3PE 3PE . F 5 3PE A 1 1903 1904 3PE 3PE . G 5 3PE A 1 1904 1905 3PE 3PE . H 5 3PE A 1 1905 1906 3PE 3PE . I 5 3PE A 1 1906 1907 3PE 3PE . J 5 3PE A 1 1907 1908 3PE 3PE . K 5 3PE A 1 1908 1909 3PE 3PE . L 6 PC1 A 1 1909 1910 PC1 PC1 . M 5 3PE A 1 1910 1911 3PE 3PE . N 5 3PE A 1 1911 1912 3PE 3PE . O 7 POV A 1 1912 1913 POV POV . P 8 6UB A 1 1913 2001 6UB 6UB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . O 7 150.106 165.136 149.464 1 23.31 ? N POV 1912 A 1 HETATM 2 P P POV . . . O 7 149.606 161.083 150.903 1 23.31 ? P POV 1912 A 1 HETATM 3 C C1 POV . . . O 7 150.848 159.527 149.16 1 23.31 ? C1 POV 1912 A 1 HETATM 4 C C2 POV . . . O 7 149.725 159.035 148.25 1 23.31 ? C2 POV 1912 A 1 HETATM 5 C C3 POV . . . O 7 150.286 158.039 147.243 1 23.31 ? C3 POV 1912 A 1 HETATM 6 C C210 POV . . . O 7 144.462 151.468 144.673 1 23.31 ? C210 POV 1912 A 1 HETATM 7 C C310 POV . . . O 7 148.222 146.454 143.249 1 23.31 ? C310 POV 1912 A 1 HETATM 8 C C11 POV . . . O 7 148.571 163.433 150.297 1 23.31 ? C11 POV 1912 A 1 HETATM 9 O O11 POV . . . O 7 150.571 160.844 149.637 1 23.31 ? O11 POV 1912 A 1 HETATM 10 C C211 POV . . . O 7 143.659 152.278 143.688 1 23.31 ? C211 POV 1912 A 1 HETATM 11 C C311 POV . . . O 7 148.255 145.229 144.157 1 23.31 ? C311 POV 1912 A 1 HETATM 12 C C12 POV . . . O 7 149.448 163.867 149.131 1 23.31 ? C12 POV 1912 A 1 HETATM 13 O O12 POV . . . O 7 148.444 162.014 150.291 1 23.31 ? O12 POV 1912 A 1 HETATM 14 C C212 POV . . . O 7 142.777 151.338 142.879 1 23.31 ? C212 POV 1912 A 1 HETATM 15 C C13 POV . . . O 7 149.134 166.23 149.349 1 23.31 ? C13 POV 1912 A 1 HETATM 16 O O13 POV . . . O 7 148.991 159.757 151.285 1 23.31 -1 O13 POV 1912 A 1 HETATM 17 C C213 POV . . . O 7 143.596 150.21 142.266 1 23.31 ? C213 POV 1912 A 1 HETATM 18 C C14 POV . . . O 7 150.614 165.077 150.84 1 23.31 ? C14 POV 1912 A 1 HETATM 19 O O14 POV . . . O 7 150.365 161.884 151.933 1 23.31 ? O14 POV 1912 A 1 HETATM 20 C C214 POV . . . O 7 142.69 149.185 141.597 1 23.31 ? C214 POV 1912 A 1 HETATM 21 C C15 POV . . . O 7 151.223 165.374 148.539 1 23.31 ? C15 POV 1912 A 1 HETATM 22 C C215 POV . . . O 7 141.731 148.558 142.603 1 23.31 ? C215 POV 1912 A 1 HETATM 23 C C216 POV . . . O 7 140.967 147.389 141.992 1 23.31 ? C216 POV 1912 A 1 HETATM 24 C C217 POV . . . O 7 141.194 147.314 140.487 1 23.31 ? C217 POV 1912 A 1 HETATM 25 C C218 POV . . . O 7 141.322 145.879 140.025 1 23.31 ? C218 POV 1912 A 1 HETATM 26 C C21 POV . . . O 7 147.68 160.062 147.589 1 23.31 ? C21 POV 1912 A 1 HETATM 27 O O21 POV . . . O 7 149.131 160.126 147.547 1 23.31 ? O21 POV 1912 A 1 HETATM 28 C C22 POV . . . O 7 146.914 159.394 146.475 1 23.31 ? C22 POV 1912 A 1 HETATM 29 O O22 POV . . . O 7 147.09 160.55 148.537 1 23.31 ? O22 POV 1912 A 1 HETATM 30 C C23 POV . . . O 7 146.191 158.174 147.031 1 23.31 ? C23 POV 1912 A 1 HETATM 31 C C24 POV . . . O 7 146.988 157.534 148.161 1 23.31 ? C24 POV 1912 A 1 HETATM 32 C C25 POV . . . O 7 147.053 156.023 147.992 1 23.31 ? C25 POV 1912 A 1 HETATM 33 C C26 POV . . . O 7 145.975 155.544 147.029 1 23.31 ? C26 POV 1912 A 1 HETATM 34 C C27 POV . . . O 7 146.026 154.032 146.861 1 23.31 ? C27 POV 1912 A 1 HETATM 35 C C28 POV . . . O 7 145.103 153.586 145.736 1 23.31 ? C28 POV 1912 A 1 HETATM 36 C C29 POV . . . O 7 145.14 152.082 145.635 1 23.31 ? C29 POV 1912 A 1 HETATM 37 C C31 POV . . . O 7 150.285 155.544 147.287 1 23.31 ? C31 POV 1912 A 1 HETATM 38 O O31 POV . . . O 7 150.596 156.819 147.909 1 23.31 ? O31 POV 1912 A 1 HETATM 39 C C32 POV . . . O 7 150.454 155.339 145.802 1 23.31 ? C32 POV 1912 A 1 HETATM 40 O O32 POV . . . O 7 149.881 154.635 147.989 1 23.31 ? O32 POV 1912 A 1 HETATM 41 C C33 POV . . . O 7 150.029 153.917 145.453 1 23.31 ? C33 POV 1912 A 1 HETATM 42 C C34 POV . . . O 7 150.05 153.679 143.95 1 23.31 ? C34 POV 1912 A 1 HETATM 43 C C35 POV . . . O 7 150.276 152.205 143.639 1 23.31 ? C35 POV 1912 A 1 HETATM 44 C C36 POV . . . O 7 148.972 151.416 143.679 1 23.31 ? C36 POV 1912 A 1 HETATM 45 C C37 POV . . . O 7 149.177 150.048 144.32 1 23.31 ? C37 POV 1912 A 1 HETATM 46 C C38 POV . . . O 7 148.422 148.952 143.574 1 23.31 ? C38 POV 1912 A 1 HETATM 47 C C39 POV . . . O 7 149.064 147.59 143.819 1 23.31 ? C39 POV 1912 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 22 _model_server_stats.element_count 47 #