data_7JRA
#
_model_server_result.job_id            mLb6it9TGmhjemhdbMtxBg 
_model_server_result.datetime_utc      '2024-10-15 11:30:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jra 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":302}' 
#
_entry.id    7JRA 
#
_exptl.entry_id    7JRA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7JRA 
_cell.length_a            54.48 
_cell.length_b            81.71 
_cell.length_c            92.97 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7JRA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 72 A CYS 145 1_555 A SG CYS 104 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf2 B SG CYS 72 B CYS 145 1_555 B SG CYS 104 B CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 C SG CYS 72 C CYS 145 1_555 C SG CYS 104 C CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7JRA 
_atom_sites.fract_transf_matrix[1][1]    0.018355 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012238 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010756 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 VGY B 1 301 1 VGY LG1 . 
E 3 GOL B 1 302 1 GOL GOL . 
F 4 HOH A 1 301 39 HOH HOH . 
F 4 HOH A 2 302 161 HOH HOH . 
F 4 HOH A 3 303 23 HOH HOH . 
F 4 HOH A 4 304 139 HOH HOH . 
F 4 HOH A 5 305 37 HOH HOH . 
F 4 HOH A 6 306 96 HOH HOH . 
F 4 HOH A 7 307 19 HOH HOH . 
F 4 HOH A 8 308 10 HOH HOH . 
F 4 HOH A 9 309 167 HOH HOH . 
F 4 HOH A 10 310 168 HOH HOH . 
F 4 HOH A 11 311 146 HOH HOH . 
F 4 HOH A 12 312 52 HOH HOH . 
F 4 HOH A 13 313 112 HOH HOH . 
F 4 HOH A 14 314 140 HOH HOH . 
F 4 HOH A 15 315 97 HOH HOH . 
F 4 HOH A 16 316 116 HOH HOH . 
F 4 HOH A 17 317 33 HOH HOH . 
F 4 HOH A 18 318 130 HOH HOH . 
F 4 HOH A 19 319 86 HOH HOH . 
F 4 HOH A 20 320 64 HOH HOH . 
F 4 HOH A 21 321 67 HOH HOH . 
F 4 HOH A 22 322 117 HOH HOH . 
F 4 HOH A 23 323 25 HOH HOH . 
F 4 HOH A 24 324 8 HOH HOH . 
F 4 HOH A 25 325 147 HOH HOH . 
F 4 HOH A 26 326 41 HOH HOH . 
F 4 HOH A 27 327 34 HOH HOH . 
F 4 HOH A 28 328 63 HOH HOH . 
F 4 HOH A 29 329 126 HOH HOH . 
F 4 HOH A 30 330 68 HOH HOH . 
F 4 HOH A 31 331 70 HOH HOH . 
F 4 HOH A 32 332 5 HOH HOH . 
F 4 HOH A 33 333 71 HOH HOH . 
F 4 HOH A 34 334 16 HOH HOH . 
F 4 HOH A 35 335 149 HOH HOH . 
F 4 HOH A 36 336 81 HOH HOH . 
F 4 HOH A 37 337 88 HOH HOH . 
F 4 HOH A 38 338 125 HOH HOH . 
F 4 HOH A 39 339 104 HOH HOH . 
F 4 HOH A 40 340 54 HOH HOH . 
F 4 HOH A 41 341 157 HOH HOH . 
F 4 HOH A 42 342 90 HOH HOH . 
F 4 HOH A 43 343 12 HOH HOH . 
F 4 HOH A 44 344 14 HOH HOH . 
F 4 HOH A 45 345 83 HOH HOH . 
F 4 HOH A 46 346 35 HOH HOH . 
F 4 HOH A 47 347 28 HOH HOH . 
F 4 HOH A 48 348 48 HOH HOH . 
F 4 HOH A 49 349 27 HOH HOH . 
F 4 HOH A 50 350 89 HOH HOH . 
F 4 HOH A 51 351 36 HOH HOH . 
F 4 HOH A 52 352 95 HOH HOH . 
F 4 HOH A 53 353 74 HOH HOH . 
F 4 HOH A 54 354 49 HOH HOH . 
F 4 HOH A 55 355 4 HOH HOH . 
F 4 HOH A 56 356 79 HOH HOH . 
F 4 HOH A 57 357 22 HOH HOH . 
F 4 HOH A 58 358 85 HOH HOH . 
F 4 HOH A 59 359 42 HOH HOH . 
F 4 HOH A 60 360 114 HOH HOH . 
F 4 HOH A 61 361 87 HOH HOH . 
F 4 HOH A 62 362 148 HOH HOH . 
F 4 HOH A 63 363 99 HOH HOH . 
F 4 HOH A 64 364 144 HOH HOH . 
F 4 HOH A 65 365 137 HOH HOH . 
F 4 HOH A 66 366 50 HOH HOH . 
F 4 HOH A 67 367 122 HOH HOH . 
F 4 HOH A 68 368 145 HOH HOH . 
F 4 HOH A 69 369 131 HOH HOH . 
F 4 HOH A 70 370 101 HOH HOH . 
F 4 HOH A 71 371 153 HOH HOH . 
F 4 HOH A 72 372 155 HOH HOH . 
F 4 HOH A 73 373 108 HOH HOH . 
F 4 HOH A 74 374 143 HOH HOH . 
F 4 HOH A 75 375 105 HOH HOH . 
F 4 HOH A 76 376 158 HOH HOH . 
G 4 HOH B 1 401 138 HOH HOH . 
G 4 HOH B 2 402 163 HOH HOH . 
G 4 HOH B 3 403 109 HOH HOH . 
G 4 HOH B 4 404 1 HOH HOH . 
G 4 HOH B 5 405 141 HOH HOH . 
G 4 HOH B 6 406 123 HOH HOH . 
G 4 HOH B 7 407 120 HOH HOH . 
G 4 HOH B 8 408 164 HOH HOH . 
G 4 HOH B 9 409 20 HOH HOH . 
G 4 HOH B 10 410 13 HOH HOH . 
G 4 HOH B 11 411 94 HOH HOH . 
G 4 HOH B 12 412 24 HOH HOH . 
G 4 HOH B 13 413 107 HOH HOH . 
G 4 HOH B 14 414 82 HOH HOH . 
G 4 HOH B 15 415 111 HOH HOH . 
G 4 HOH B 16 416 76 HOH HOH . 
G 4 HOH B 17 417 2 HOH HOH . 
G 4 HOH B 18 418 30 HOH HOH . 
G 4 HOH B 19 419 135 HOH HOH . 
G 4 HOH B 20 420 3 HOH HOH . 
G 4 HOH B 21 421 66 HOH HOH . 
G 4 HOH B 22 422 7 HOH HOH . 
G 4 HOH B 23 423 102 HOH HOH . 
G 4 HOH B 24 424 118 HOH HOH . 
G 4 HOH B 25 425 59 HOH HOH . 
G 4 HOH B 26 426 129 HOH HOH . 
G 4 HOH B 27 427 9 HOH HOH . 
G 4 HOH B 28 428 53 HOH HOH . 
G 4 HOH B 29 429 124 HOH HOH . 
G 4 HOH B 30 430 127 HOH HOH . 
G 4 HOH B 31 431 162 HOH HOH . 
G 4 HOH B 32 432 119 HOH HOH . 
G 4 HOH B 33 433 15 HOH HOH . 
G 4 HOH B 34 434 78 HOH HOH . 
G 4 HOH B 35 435 65 HOH HOH . 
G 4 HOH B 36 436 29 HOH HOH . 
G 4 HOH B 37 437 61 HOH HOH . 
G 4 HOH B 38 438 154 HOH HOH . 
G 4 HOH B 39 439 38 HOH HOH . 
G 4 HOH B 40 440 132 HOH HOH . 
G 4 HOH B 41 441 100 HOH HOH . 
G 4 HOH B 42 442 128 HOH HOH . 
G 4 HOH B 43 443 32 HOH HOH . 
G 4 HOH B 44 444 151 HOH HOH . 
G 4 HOH B 45 445 72 HOH HOH . 
G 4 HOH B 46 446 26 HOH HOH . 
G 4 HOH B 47 447 17 HOH HOH . 
G 4 HOH B 48 448 142 HOH HOH . 
G 4 HOH B 49 449 77 HOH HOH . 
G 4 HOH B 50 450 73 HOH HOH . 
G 4 HOH B 51 451 110 HOH HOH . 
G 4 HOH B 52 452 165 HOH HOH . 
G 4 HOH B 53 453 106 HOH HOH . 
G 4 HOH B 54 454 31 HOH HOH . 
G 4 HOH B 55 455 43 HOH HOH . 
G 4 HOH B 56 456 160 HOH HOH . 
G 4 HOH B 57 457 103 HOH HOH . 
G 4 HOH B 58 458 91 HOH HOH . 
G 4 HOH B 59 459 56 HOH HOH . 
G 4 HOH B 60 460 98 HOH HOH . 
G 4 HOH B 61 461 18 HOH HOH . 
G 4 HOH B 62 462 93 HOH HOH . 
G 4 HOH B 63 463 156 HOH HOH . 
G 4 HOH B 64 464 133 HOH HOH . 
G 4 HOH B 65 465 121 HOH HOH . 
G 4 HOH B 66 466 170 HOH HOH . 
G 4 HOH B 67 467 166 HOH HOH . 
G 4 HOH B 68 468 80 HOH HOH . 
G 4 HOH B 69 469 159 HOH HOH . 
G 4 HOH B 70 470 136 HOH HOH . 
H 4 HOH C 1 301 6 HOH HOH . 
H 4 HOH C 2 302 84 HOH HOH . 
H 4 HOH C 3 303 44 HOH HOH . 
H 4 HOH C 4 304 69 HOH HOH . 
H 4 HOH C 5 305 92 HOH HOH . 
H 4 HOH C 6 306 51 HOH HOH . 
H 4 HOH C 7 307 150 HOH HOH . 
H 4 HOH C 8 308 57 HOH HOH . 
H 4 HOH C 9 309 60 HOH HOH . 
H 4 HOH C 10 310 45 HOH HOH . 
H 4 HOH C 11 311 46 HOH HOH . 
H 4 HOH C 12 312 55 HOH HOH . 
H 4 HOH C 13 313 11 HOH HOH . 
H 4 HOH C 14 314 58 HOH HOH . 
H 4 HOH C 15 315 75 HOH HOH . 
H 4 HOH C 16 316 113 HOH HOH . 
H 4 HOH C 17 317 134 HOH HOH . 
H 4 HOH C 18 318 21 HOH HOH . 
H 4 HOH C 19 319 40 HOH HOH . 
H 4 HOH C 20 320 152 HOH HOH . 
H 4 HOH C 21 321 62 HOH HOH . 
H 4 HOH C 22 322 169 HOH HOH . 
H 4 HOH C 23 323 47 HOH HOH . 
H 4 HOH C 24 324 115 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 -3.197 2.995 -33.238 1 32.57 ? C1 GOL 302 B 1 
HETATM 2 O O1 GOL . . . E 3 -4.033 3.818 -32.42 1 29.29 ? O1 GOL 302 B 1 
HETATM 3 C C2 GOL . . . E 3 -2.145 2.267 -32.431 1 34.32 ? C2 GOL 302 B 1 
HETATM 4 O O2 GOL . . . E 3 -2.508 2.28 -31.053 1 38.25 ? O2 GOL 302 B 1 
HETATM 5 C C3 GOL . . . E 3 -1.958 0.846 -32.912 1 34.15 ? C3 GOL 302 B 1 
HETATM 6 O O3 GOL . . . E 3 -1.587 -0.068 -31.867 1 30.86 ? O3 GOL 302 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#