data_7JRN
#
_model_server_result.job_id            wHMLW6tAFy3JBgpPXozvRA 
_model_server_result.datetime_utc      '2024-11-08 09:52:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jrn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7JRN 
#
_exptl.entry_id    7JRN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              304.386 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.26 
_cell.angle_gamma         90 
_cell.entry_id            7JRN 
_cell.length_a            46.733 
_cell.length_b            144.872 
_cell.length_c            60.145 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7JRN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,L 1 1 
B,G,H,I,J,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 189 A CYS 189 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
metalc ? metalc2 A SG CYS 192 A CYS 192 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? 
metalc ? metalc3 A SG CYS 224 A CYS 224 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
metalc ? metalc4 B OG1 THR 191 J THR 191 1_555 H ZN ZN . J ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
metalc ? metalc5 B SG CYS 226 J CYS 226 1_555 H ZN ZN . J ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
#
_chem_comp.formula           'C20 H20 N2 O' 
_chem_comp.formula_weight    304.386 
_chem_comp.id                TTT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C3 TTT sing 338 n n 
C1 O7 TTT doub 339 n n 
C1 N2 TTT sing 340 n n 
C3 C10 TTT doub 341 n y 
C3 C13 TTT sing 342 n y 
C8 C11 TTT doub 343 n y 
C8 C14 TTT sing 344 n y 
C8 C5 TTT sing 345 n y 
C9 C12 TTT doub 346 n y 
C9 C4 TTT sing 347 n y 
C10 C16 TTT sing 348 n n 
C10 C17 TTT sing 349 n y 
C11 C12 TTT sing 350 n y 
C11 C18 TTT sing 351 n y 
C13 C19 TTT doub 352 n y 
C14 C20 TTT doub 353 n y 
C19 C21 TTT sing 354 n y 
C19 N01 TTT sing 355 n n 
C20 C22 TTT sing 356 n y 
C21 C17 TTT doub 357 n y 
C22 C18 TTT doub 358 n y 
N2 C6 TTT sing 359 n n 
C6 C01 TTT sing 360 n n 
C6 C5 TTT sing 361 n n 
C5 C4 TTT doub 362 n y 
C9 H9 TTT sing 363 n n 
C12 H12 TTT sing 364 n n 
C13 H13 TTT sing 365 n n 
C14 H14 TTT sing 366 n n 
C16 H16 TTT sing 367 n n 
C16 H16A TTT sing 368 n n 
C16 H16B TTT sing 369 n n 
C20 H20 TTT sing 370 n n 
C21 H21 TTT sing 371 n n 
C22 H22 TTT sing 372 n n 
C17 H17 TTT sing 373 n n 
N01 HN01 TTT sing 374 n n 
N01 HN0A TTT sing 375 n n 
N2 HN2 TTT sing 376 n n 
C6 H6 TTT sing 377 n n 
C01 H01 TTT sing 378 n n 
C01 H01A TTT sing 379 n n 
C01 H01B TTT sing 380 n n 
C18 H18 TTT sing 381 n n 
C4 H4 TTT sing 382 n n 
#
_atom_sites.entry_id                     7JRN 
_atom_sites.fract_transf_matrix[1][1]    0.021398 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003491 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006903 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016846 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TTT A 1 401 401 TTT GRL . 
D 3 ZN A 1 402 501 ZN ZN . 
E 4 SO4 A 1 403 3 SO4 SO4 . 
F 4 SO4 A 1 404 4 SO4 SO4 . 
G 2 TTT J 1 401 401 TTT GRL . 
H 3 ZN J 1 402 501 ZN ZN . 
I 4 SO4 J 1 403 2 SO4 SO4 . 
J 4 SO4 J 1 404 9 SO4 SO4 . 
K 4 SO4 J 1 405 10 SO4 SO4 . 
L 5 HOH A 1 501 307 HOH HOH . 
L 5 HOH A 2 502 78 HOH HOH . 
L 5 HOH A 3 503 286 HOH HOH . 
L 5 HOH A 4 504 12 HOH HOH . 
L 5 HOH A 5 505 155 HOH HOH . 
L 5 HOH A 6 506 84 HOH HOH . 
L 5 HOH A 7 507 74 HOH HOH . 
L 5 HOH A 8 508 82 HOH HOH . 
L 5 HOH A 9 509 138 HOH HOH . 
L 5 HOH A 10 510 96 HOH HOH . 
L 5 HOH A 11 511 227 HOH HOH . 
L 5 HOH A 12 512 1 HOH HOH . 
L 5 HOH A 13 513 288 HOH HOH . 
L 5 HOH A 14 514 56 HOH HOH . 
L 5 HOH A 15 515 297 HOH HOH . 
L 5 HOH A 16 516 299 HOH HOH . 
L 5 HOH A 17 517 97 HOH HOH . 
L 5 HOH A 18 518 280 HOH HOH . 
L 5 HOH A 19 519 6 HOH HOH . 
L 5 HOH A 20 520 102 HOH HOH . 
L 5 HOH A 21 521 5 HOH HOH . 
L 5 HOH A 22 522 287 HOH HOH . 
L 5 HOH A 23 523 272 HOH HOH . 
L 5 HOH A 24 524 11 HOH HOH . 
L 5 HOH A 25 525 3 HOH HOH . 
L 5 HOH A 26 526 150 HOH HOH . 
L 5 HOH A 27 527 29 HOH HOH . 
L 5 HOH A 28 528 216 HOH HOH . 
L 5 HOH A 29 529 201 HOH HOH . 
L 5 HOH A 30 530 301 HOH HOH . 
L 5 HOH A 31 531 300 HOH HOH . 
L 5 HOH A 32 532 262 HOH HOH . 
L 5 HOH A 33 533 279 HOH HOH . 
L 5 HOH A 34 534 219 HOH HOH . 
L 5 HOH A 35 535 273 HOH HOH . 
L 5 HOH A 36 536 298 HOH HOH . 
L 5 HOH A 37 537 20 HOH HOH . 
L 5 HOH A 38 538 23 HOH HOH . 
L 5 HOH A 39 539 268 HOH HOH . 
L 5 HOH A 40 540 305 HOH HOH . 
L 5 HOH A 41 541 8 HOH HOH . 
L 5 HOH A 42 542 86 HOH HOH . 
L 5 HOH A 43 543 26 HOH HOH . 
L 5 HOH A 44 544 124 HOH HOH . 
L 5 HOH A 45 545 292 HOH HOH . 
L 5 HOH A 46 546 285 HOH HOH . 
L 5 HOH A 47 547 284 HOH HOH . 
M 5 HOH J 1 501 308 HOH HOH . 
M 5 HOH J 2 502 59 HOH HOH . 
M 5 HOH J 3 503 77 HOH HOH . 
M 5 HOH J 4 504 289 HOH HOH . 
M 5 HOH J 5 505 290 HOH HOH . 
M 5 HOH J 6 506 38 HOH HOH . 
M 5 HOH J 7 507 276 HOH HOH . 
M 5 HOH J 8 508 71 HOH HOH . 
M 5 HOH J 9 509 278 HOH HOH . 
M 5 HOH J 10 510 282 HOH HOH . 
M 5 HOH J 11 511 274 HOH HOH . 
M 5 HOH J 12 512 129 HOH HOH . 
M 5 HOH J 13 513 16 HOH HOH . 
M 5 HOH J 14 514 31 HOH HOH . 
M 5 HOH J 15 515 90 HOH HOH . 
M 5 HOH J 16 516 275 HOH HOH . 
M 5 HOH J 17 517 302 HOH HOH . 
M 5 HOH J 18 518 52 HOH HOH . 
M 5 HOH J 19 519 277 HOH HOH . 
M 5 HOH J 20 520 49 HOH HOH . 
M 5 HOH J 21 521 18 HOH HOH . 
M 5 HOH J 22 522 281 HOH HOH . 
M 5 HOH J 23 523 61 HOH HOH . 
M 5 HOH J 24 524 39 HOH HOH . 
M 5 HOH J 25 525 295 HOH HOH . 
M 5 HOH J 26 526 88 HOH HOH . 
M 5 HOH J 27 527 42 HOH HOH . 
M 5 HOH J 28 528 271 HOH HOH . 
M 5 HOH J 29 529 267 HOH HOH . 
M 5 HOH J 30 530 47 HOH HOH . 
M 5 HOH J 31 531 197 HOH HOH . 
M 5 HOH J 32 532 296 HOH HOH . 
M 5 HOH J 33 533 303 HOH HOH . 
M 5 HOH J 34 534 68 HOH HOH . 
M 5 HOH J 35 535 70 HOH HOH . 
M 5 HOH J 36 536 306 HOH HOH . 
M 5 HOH J 37 537 43 HOH HOH . 
M 5 HOH J 38 538 293 HOH HOH . 
M 5 HOH J 39 539 304 HOH HOH . 
M 5 HOH J 40 540 294 HOH HOH . 
M 5 HOH J 41 541 264 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 TTT . . . C 2 10.532 -10.639 32.828 1 21.6 ? C1 TTT 401 A 1 
HETATM 2 C C3 TTT . . . C 2 10.202 -9.123 32.976 1 21.34 ? C3 TTT 401 A 1 
HETATM 3 C C8 TTT . . . C 2 9.805 -14.732 32.782 1 26.76 ? C8 TTT 401 A 1 
HETATM 4 C C9 TTT . . . C 2 7.537 -14.18 31.144 1 27 ? C9 TTT 401 A 1 
HETATM 5 C C10 TTT . . . C 2 11.231 -8.135 33.042 1 21.04 ? C10 TTT 401 A 1 
HETATM 6 C C11 TTT . . . C 2 8.629 -15.456 32.961 1 26.92 ? C11 TTT 401 A 1 
HETATM 7 C C12 TTT . . . C 2 7.464 -15.19 32.139 1 28.03 ? C12 TTT 401 A 1 
HETATM 8 C C13 TTT . . . C 2 8.834 -8.714 33.052 1 22.21 ? C13 TTT 401 A 1 
HETATM 9 C C14 TTT . . . C 2 10.948 -15.035 33.631 1 27.72 ? C14 TTT 401 A 1 
HETATM 10 C C16 TTT . . . C 2 12.722 -8.483 32.966 1 20.93 ? C16 TTT 401 A 1 
HETATM 11 C C19 TTT . . . C 2 8.454 -7.343 33.189 1 21.95 ? C19 TTT 401 A 1 
HETATM 12 C C20 TTT . . . C 2 10.856 -16.052 34.622 1 26.86 ? C20 TTT 401 A 1 
HETATM 13 C C21 TTT . . . C 2 9.472 -6.363 33.255 1 22.84 ? C21 TTT 401 A 1 
HETATM 14 C C22 TTT . . . C 2 9.649 -16.782 34.792 1 26.46 ? C22 TTT 401 A 1 
HETATM 15 O O7 TTT . . . C 2 10.517 -11.367 33.841 1 23.77 ? O7 TTT 401 A 1 
HETATM 16 C C17 TTT . . . C 2 10.843 -6.764 33.183 1 21.73 ? C17 TTT 401 A 1 
HETATM 17 N N01 TTT . . . C 2 7.056 -6.964 33.265 1 23.18 ? N01 TTT 401 A 1 
HETATM 18 N N2 TTT . . . C 2 10.875 -11.327 31.594 1 24.83 ? N2 TTT 401 A 1 
HETATM 19 C C6 TTT . . . C 2 11.185 -12.792 31.46 1 25.39 ? C6 TTT 401 A 1 
HETATM 20 C C01 TTT . . . C 2 11.759 -13.107 30.035 1 25.09 ? C01 TTT 401 A 1 
HETATM 21 C C5 TTT . . . C 2 9.906 -13.668 31.74 1 26.43 ? C5 TTT 401 A 1 
HETATM 22 C C18 TTT . . . C 2 8.526 -16.496 33.97 1 26.03 ? C18 TTT 401 A 1 
HETATM 23 C C4 TTT . . . C 2 8.744 -13.435 30.956 1 25.71 ? C4 TTT 401 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           23 
#