data_7JRN # _model_server_result.job_id 94thX9iJEww54Sdhhpvctg _model_server_result.datetime_utc '2024-11-08 09:53:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jrn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 7JRN # _exptl.entry_id 7JRN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 304.386 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.26 _cell.angle_gamma 90 _cell.entry_id 7JRN _cell.length_a 46.733 _cell.length_b 144.872 _cell.length_c 60.145 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JRN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,L 1 1 B,G,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 189 A CYS 189 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc2 A SG CYS 192 A CYS 192 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc3 A SG CYS 224 A CYS 224 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc4 B OG1 THR 191 J THR 191 1_555 H ZN ZN . J ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc5 B SG CYS 226 J CYS 226 1_555 H ZN ZN . J ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? # _chem_comp.formula 'C20 H20 N2 O' _chem_comp.formula_weight 304.386 _chem_comp.id TTT _chem_comp.mon_nstd_flag . _chem_comp.name 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C3 TTT sing 338 n n C1 O7 TTT doub 339 n n C1 N2 TTT sing 340 n n C3 C10 TTT doub 341 n y C3 C13 TTT sing 342 n y C8 C11 TTT doub 343 n y C8 C14 TTT sing 344 n y C8 C5 TTT sing 345 n y C9 C12 TTT doub 346 n y C9 C4 TTT sing 347 n y C10 C16 TTT sing 348 n n C10 C17 TTT sing 349 n y C11 C12 TTT sing 350 n y C11 C18 TTT sing 351 n y C13 C19 TTT doub 352 n y C14 C20 TTT doub 353 n y C19 C21 TTT sing 354 n y C19 N01 TTT sing 355 n n C20 C22 TTT sing 356 n y C21 C17 TTT doub 357 n y C22 C18 TTT doub 358 n y N2 C6 TTT sing 359 n n C6 C01 TTT sing 360 n n C6 C5 TTT sing 361 n n C5 C4 TTT doub 362 n y C9 H9 TTT sing 363 n n C12 H12 TTT sing 364 n n C13 H13 TTT sing 365 n n C14 H14 TTT sing 366 n n C16 H16 TTT sing 367 n n C16 H16A TTT sing 368 n n C16 H16B TTT sing 369 n n C20 H20 TTT sing 370 n n C21 H21 TTT sing 371 n n C22 H22 TTT sing 372 n n C17 H17 TTT sing 373 n n N01 HN01 TTT sing 374 n n N01 HN0A TTT sing 375 n n N2 HN2 TTT sing 376 n n C6 H6 TTT sing 377 n n C01 H01 TTT sing 378 n n C01 H01A TTT sing 379 n n C01 H01B TTT sing 380 n n C18 H18 TTT sing 381 n n C4 H4 TTT sing 382 n n # _atom_sites.entry_id 7JRN _atom_sites.fract_transf_matrix[1][1] 0.021398 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003491 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016846 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TTT A 1 401 401 TTT GRL . D 3 ZN A 1 402 501 ZN ZN . E 4 SO4 A 1 403 3 SO4 SO4 . F 4 SO4 A 1 404 4 SO4 SO4 . G 2 TTT J 1 401 401 TTT GRL . H 3 ZN J 1 402 501 ZN ZN . I 4 SO4 J 1 403 2 SO4 SO4 . J 4 SO4 J 1 404 9 SO4 SO4 . K 4 SO4 J 1 405 10 SO4 SO4 . L 5 HOH A 1 501 307 HOH HOH . L 5 HOH A 2 502 78 HOH HOH . L 5 HOH A 3 503 286 HOH HOH . L 5 HOH A 4 504 12 HOH HOH . L 5 HOH A 5 505 155 HOH HOH . L 5 HOH A 6 506 84 HOH HOH . L 5 HOH A 7 507 74 HOH HOH . L 5 HOH A 8 508 82 HOH HOH . L 5 HOH A 9 509 138 HOH HOH . L 5 HOH A 10 510 96 HOH HOH . L 5 HOH A 11 511 227 HOH HOH . L 5 HOH A 12 512 1 HOH HOH . L 5 HOH A 13 513 288 HOH HOH . L 5 HOH A 14 514 56 HOH HOH . L 5 HOH A 15 515 297 HOH HOH . L 5 HOH A 16 516 299 HOH HOH . L 5 HOH A 17 517 97 HOH HOH . L 5 HOH A 18 518 280 HOH HOH . L 5 HOH A 19 519 6 HOH HOH . L 5 HOH A 20 520 102 HOH HOH . L 5 HOH A 21 521 5 HOH HOH . L 5 HOH A 22 522 287 HOH HOH . L 5 HOH A 23 523 272 HOH HOH . L 5 HOH A 24 524 11 HOH HOH . L 5 HOH A 25 525 3 HOH HOH . L 5 HOH A 26 526 150 HOH HOH . L 5 HOH A 27 527 29 HOH HOH . L 5 HOH A 28 528 216 HOH HOH . L 5 HOH A 29 529 201 HOH HOH . L 5 HOH A 30 530 301 HOH HOH . L 5 HOH A 31 531 300 HOH HOH . L 5 HOH A 32 532 262 HOH HOH . L 5 HOH A 33 533 279 HOH HOH . L 5 HOH A 34 534 219 HOH HOH . L 5 HOH A 35 535 273 HOH HOH . L 5 HOH A 36 536 298 HOH HOH . L 5 HOH A 37 537 20 HOH HOH . L 5 HOH A 38 538 23 HOH HOH . L 5 HOH A 39 539 268 HOH HOH . L 5 HOH A 40 540 305 HOH HOH . L 5 HOH A 41 541 8 HOH HOH . L 5 HOH A 42 542 86 HOH HOH . L 5 HOH A 43 543 26 HOH HOH . L 5 HOH A 44 544 124 HOH HOH . L 5 HOH A 45 545 292 HOH HOH . L 5 HOH A 46 546 285 HOH HOH . L 5 HOH A 47 547 284 HOH HOH . M 5 HOH J 1 501 308 HOH HOH . M 5 HOH J 2 502 59 HOH HOH . M 5 HOH J 3 503 77 HOH HOH . M 5 HOH J 4 504 289 HOH HOH . M 5 HOH J 5 505 290 HOH HOH . M 5 HOH J 6 506 38 HOH HOH . M 5 HOH J 7 507 276 HOH HOH . M 5 HOH J 8 508 71 HOH HOH . M 5 HOH J 9 509 278 HOH HOH . M 5 HOH J 10 510 282 HOH HOH . M 5 HOH J 11 511 274 HOH HOH . M 5 HOH J 12 512 129 HOH HOH . M 5 HOH J 13 513 16 HOH HOH . M 5 HOH J 14 514 31 HOH HOH . M 5 HOH J 15 515 90 HOH HOH . M 5 HOH J 16 516 275 HOH HOH . M 5 HOH J 17 517 302 HOH HOH . M 5 HOH J 18 518 52 HOH HOH . M 5 HOH J 19 519 277 HOH HOH . M 5 HOH J 20 520 49 HOH HOH . M 5 HOH J 21 521 18 HOH HOH . M 5 HOH J 22 522 281 HOH HOH . M 5 HOH J 23 523 61 HOH HOH . M 5 HOH J 24 524 39 HOH HOH . M 5 HOH J 25 525 295 HOH HOH . M 5 HOH J 26 526 88 HOH HOH . M 5 HOH J 27 527 42 HOH HOH . M 5 HOH J 28 528 271 HOH HOH . M 5 HOH J 29 529 267 HOH HOH . M 5 HOH J 30 530 47 HOH HOH . M 5 HOH J 31 531 197 HOH HOH . M 5 HOH J 32 532 296 HOH HOH . M 5 HOH J 33 533 303 HOH HOH . M 5 HOH J 34 534 68 HOH HOH . M 5 HOH J 35 535 70 HOH HOH . M 5 HOH J 36 536 306 HOH HOH . M 5 HOH J 37 537 43 HOH HOH . M 5 HOH J 38 538 293 HOH HOH . M 5 HOH J 39 539 304 HOH HOH . M 5 HOH J 40 540 294 HOH HOH . M 5 HOH J 41 541 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TTT . . . G 2 16.396 64.478 -5.574 1 27.03 ? C1 TTT 401 J 1 HETATM 2 C C3 TTT . . . G 2 16.109 62.984 -5.858 1 27.6 ? C3 TTT 401 J 1 HETATM 3 C C8 TTT . . . G 2 15.636 68.563 -5.636 1 27.48 ? C8 TTT 401 J 1 HETATM 4 C C9 TTT . . . G 2 12.944 68.119 -4.805 1 29.23 ? C9 TTT 401 J 1 HETATM 5 C C10 TTT . . . G 2 17.093 61.977 -5.617 1 27.16 ? C10 TTT 401 J 1 HETATM 6 C C11 TTT . . . G 2 14.608 69.34 -6.169 1 27.27 ? C11 TTT 401 J 1 HETATM 7 C C12 TTT . . . G 2 13.235 69.131 -5.759 1 28.16 ? C12 TTT 401 J 1 HETATM 8 C C13 TTT . . . G 2 14.824 62.609 -6.355 1 28.67 ? C13 TTT 401 J 1 HETATM 9 C C14 TTT . . . G 2 16.997 68.812 -6.082 1 26.95 ? C14 TTT 401 J 1 HETATM 10 C C16 TTT . . . G 2 18.494 62.299 -5.078 1 28.13 ? C16 TTT 401 J 1 HETATM 11 C C19 TTT . . . G 2 14.486 61.252 -6.635 1 31.01 ? C19 TTT 401 J 1 HETATM 12 C C20 TTT . . . G 2 17.266 69.831 -7.039 1 26.13 ? C20 TTT 401 J 1 HETATM 13 C C21 TTT . . . G 2 15.459 60.248 -6.402 1 30.69 ? C21 TTT 401 J 1 HETATM 14 C C22 TTT . . . G 2 16.208 70.615 -7.572 1 26.55 ? C22 TTT 401 J 1 HETATM 15 O O7 TTT . . . G 2 16.835 65.216 -6.477 1 27.91 ? O7 TTT 401 J 1 HETATM 16 C C17 TTT . . . G 2 16.749 60.615 -5.899 1 29.96 ? C17 TTT 401 J 1 HETATM 17 N N01 TTT . . . G 2 13.173 60.905 -7.146 1 33.32 ? N01 TTT 401 J 1 HETATM 18 N N2 TTT . . . G 2 16.197 65.124 -4.298 1 27.6 ? N2 TTT 401 J 1 HETATM 19 C C6 TTT . . . G 2 16.45 66.55 -3.966 1 27.28 ? C6 TTT 401 J 1 HETATM 20 C C01 TTT . . . G 2 16.48 66.713 -2.414 1 26.92 ? C01 TTT 401 J 1 HETATM 21 C C5 TTT . . . G 2 15.355 67.495 -4.624 1 29.22 ? C5 TTT 401 J 1 HETATM 22 C C18 TTT . . . G 2 14.871 70.382 -7.148 1 27.22 ? C18 TTT 401 J 1 HETATM 23 C C4 TTT . . . G 2 13.995 67.318 -4.255 1 29.18 ? C4 TTT 401 J 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #