data_7JRV # _model_server_result.job_id T-2W_Rz2xOumjtpBdrXwUA _model_server_result.datetime_utc '2025-07-14 19:32:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jrv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 7JRV # _exptl.entry_id 7JRV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JRV _cell.length_a 59.575 _cell.length_b 84.363 _cell.length_c 98.965 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 59 A CYS 59 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 53 A CYS 53 1_555 A SG CYS 59 A CYS 59 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 225 A CYS 225 1_555 A SG CYS 244 A CYS 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 297 A CYS 297 1_555 A SG CYS 343 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf5 A SG CYS 417 A CYS 417 1_555 A SG CYS 503 A CYS 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 231 n n O1 C6 MES sing 232 n n C2 C3 MES sing 233 n n C2 H21 MES sing 234 n n C2 H22 MES sing 235 n n C3 N4 MES sing 236 n n C3 H31 MES sing 237 n n C3 H32 MES sing 238 n n N4 C5 MES sing 239 n n N4 C7 MES sing 240 n n N4 HN4 MES sing 241 n n C5 C6 MES sing 242 n n C5 H51 MES sing 243 n n C5 H52 MES sing 244 n n C6 H61 MES sing 245 n n C6 H62 MES sing 246 n n C7 C8 MES sing 247 n n C7 H71 MES sing 248 n n C7 H72 MES sing 249 n n C8 S MES sing 250 n n C8 H81 MES sing 251 n n C8 H82 MES sing 252 n n S O1S MES doub 253 n n S O2S MES doub 254 n n S O3S MES sing 255 n n # _atom_sites.entry_id 7JRV _atom_sites.fract_transf_matrix[1][1] 0.016786 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011854 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MES A 1 601 1 MES MES . C 3 GOL A 1 602 1 GOL GOL . D 4 VHY A 1 603 1 VHY PA4 . E 5 HOH A 1 701 94 HOH HOH . E 5 HOH A 2 702 69 HOH HOH . E 5 HOH A 3 703 32 HOH HOH . E 5 HOH A 4 704 76 HOH HOH . E 5 HOH A 5 705 70 HOH HOH . E 5 HOH A 6 706 60 HOH HOH . E 5 HOH A 7 707 58 HOH HOH . E 5 HOH A 8 708 42 HOH HOH . E 5 HOH A 9 709 51 HOH HOH . E 5 HOH A 10 710 35 HOH HOH . E 5 HOH A 11 711 56 HOH HOH . E 5 HOH A 12 712 87 HOH HOH . E 5 HOH A 13 713 4 HOH HOH . E 5 HOH A 14 714 61 HOH HOH . E 5 HOH A 15 715 17 HOH HOH . E 5 HOH A 16 716 39 HOH HOH . E 5 HOH A 17 717 72 HOH HOH . E 5 HOH A 18 718 73 HOH HOH . E 5 HOH A 19 719 21 HOH HOH . E 5 HOH A 20 720 29 HOH HOH . E 5 HOH A 21 721 24 HOH HOH . E 5 HOH A 22 722 12 HOH HOH . E 5 HOH A 23 723 90 HOH HOH . E 5 HOH A 24 724 14 HOH HOH . E 5 HOH A 25 725 75 HOH HOH . E 5 HOH A 26 726 7 HOH HOH . E 5 HOH A 27 727 19 HOH HOH . E 5 HOH A 28 728 23 HOH HOH . E 5 HOH A 29 729 1 HOH HOH . E 5 HOH A 30 730 22 HOH HOH . E 5 HOH A 31 731 11 HOH HOH . E 5 HOH A 32 732 47 HOH HOH . E 5 HOH A 33 733 63 HOH HOH . E 5 HOH A 34 734 52 HOH HOH . E 5 HOH A 35 735 10 HOH HOH . E 5 HOH A 36 736 50 HOH HOH . E 5 HOH A 37 737 55 HOH HOH . E 5 HOH A 38 738 82 HOH HOH . E 5 HOH A 39 739 71 HOH HOH . E 5 HOH A 40 740 62 HOH HOH . E 5 HOH A 41 741 8 HOH HOH . E 5 HOH A 42 742 43 HOH HOH . E 5 HOH A 43 743 92 HOH HOH . E 5 HOH A 44 744 59 HOH HOH . E 5 HOH A 45 745 66 HOH HOH . E 5 HOH A 46 746 89 HOH HOH . E 5 HOH A 47 747 20 HOH HOH . E 5 HOH A 48 748 6 HOH HOH . E 5 HOH A 49 749 91 HOH HOH . E 5 HOH A 50 750 27 HOH HOH . E 5 HOH A 51 751 3 HOH HOH . E 5 HOH A 52 752 48 HOH HOH . E 5 HOH A 53 753 40 HOH HOH . E 5 HOH A 54 754 86 HOH HOH . E 5 HOH A 55 755 37 HOH HOH . E 5 HOH A 56 756 30 HOH HOH . E 5 HOH A 57 757 67 HOH HOH . E 5 HOH A 58 758 53 HOH HOH . E 5 HOH A 59 759 5 HOH HOH . E 5 HOH A 60 760 78 HOH HOH . E 5 HOH A 61 761 31 HOH HOH . E 5 HOH A 62 762 57 HOH HOH . E 5 HOH A 63 763 93 HOH HOH . E 5 HOH A 64 764 74 HOH HOH . E 5 HOH A 65 765 85 HOH HOH . E 5 HOH A 66 766 2 HOH HOH . E 5 HOH A 67 767 36 HOH HOH . E 5 HOH A 68 768 54 HOH HOH . E 5 HOH A 69 769 80 HOH HOH . E 5 HOH A 70 770 46 HOH HOH . E 5 HOH A 71 771 28 HOH HOH . E 5 HOH A 72 772 64 HOH HOH . E 5 HOH A 73 773 9 HOH HOH . E 5 HOH A 74 774 18 HOH HOH . E 5 HOH A 75 775 26 HOH HOH . E 5 HOH A 76 776 13 HOH HOH . E 5 HOH A 77 777 16 HOH HOH . E 5 HOH A 78 778 79 HOH HOH . E 5 HOH A 79 779 83 HOH HOH . E 5 HOH A 80 780 25 HOH HOH . E 5 HOH A 81 781 38 HOH HOH . E 5 HOH A 82 782 45 HOH HOH . E 5 HOH A 83 783 41 HOH HOH . E 5 HOH A 84 784 49 HOH HOH . E 5 HOH A 85 785 15 HOH HOH . E 5 HOH A 86 786 77 HOH HOH . E 5 HOH A 87 787 34 HOH HOH . E 5 HOH A 88 788 88 HOH HOH . E 5 HOH A 89 789 33 HOH HOH . E 5 HOH A 90 790 84 HOH HOH . E 5 HOH A 91 791 65 HOH HOH . E 5 HOH A 92 792 68 HOH HOH . E 5 HOH A 93 793 44 HOH HOH . E 5 HOH A 94 794 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . B 2 8.703 6.992 -35.895 1 26.94 ? O1 MES 601 A 1 HETATM 2 C C2 MES . . . B 2 8.396 5.707 -36.429 1 26.3 ? C2 MES 601 A 1 HETATM 3 C C3 MES . . . B 2 7.596 5.77 -37.73 1 28.56 ? C3 MES 601 A 1 HETATM 4 N N4 MES . . . B 2 6.683 6.92 -37.804 1 33.4 ? N4 MES 601 A 1 HETATM 5 C C5 MES . . . B 2 6.972 8.136 -37.052 1 30.66 ? C5 MES 601 A 1 HETATM 6 C C6 MES . . . B 2 7.512 7.739 -35.693 1 28.17 ? C6 MES 601 A 1 HETATM 7 C C7 MES . . . B 2 6.141 7.142 -39.149 1 27.26 ? C7 MES 601 A 1 HETATM 8 C C8 MES . . . B 2 4.88 8.006 -39.096 1 28.88 ? C8 MES 601 A 1 HETATM 9 S S MES . . . B 2 4.283 8.302 -40.651 1 38.88 ? S MES 601 A 1 HETATM 10 O O1S MES . . . B 2 3.629 7.127 -41.25 1 31.28 ? O1S MES 601 A 1 HETATM 11 O O2S MES . . . B 2 5.389 8.671 -41.566 1 26.16 ? O2S MES 601 A 1 HETATM 12 O O3S MES . . . B 2 3.223 9.322 -40.535 1 35.84 ? O3S MES 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #