data_7JSJ # _model_server_result.job_id QSVuGZy16Rc18GhCDBnbtQ _model_server_result.datetime_utc '2025-08-31 09:34:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jsj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 7JSJ # _exptl.entry_id 7JSJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 294.343 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-[2-(4-tert-butylphenyl)ethyl]-2-hydroxybutanedioic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JSJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JSJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 562 A ASN 562 1_555 C C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale2 B ND2 ASN 562 B ASN 562 1_555 G C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? metalc ? metalc1 A O SER 136 A SER 136 1_555 E NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc2 A OD1 ASN 141 A ASN 141 1_555 E NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc3 A O GLY 226 A GLY 226 1_555 E NA NA . A NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc4 A O THR 460 A THR 460 1_555 F NA NA . A NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc5 A OG1 THR 460 A THR 460 1_555 F NA NA . A NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? metalc ? metalc6 A O THR 463 A THR 463 1_555 F NA NA . A NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc7 A OD1 ASN 465 A ASN 465 1_555 F NA NA . A NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc8 A O ALA 507 A ALA 507 1_555 F NA NA . A NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc9 B O SER 136 B SER 136 1_555 I NA NA . B NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc10 B OD1 ASN 141 B ASN 141 1_555 I NA NA . B NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc11 B O GLY 226 B GLY 226 1_555 I NA NA . B NA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc12 B O THR 460 B THR 460 1_555 J NA NA . B NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc13 B OG1 THR 460 B THR 460 1_555 J NA NA . B NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc14 B O THR 463 B THR 463 1_555 J NA NA . B NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc15 B OD1 ASN 465 B ASN 465 1_555 J NA NA . B NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc16 B O ALA 507 B ALA 507 1_555 J NA NA . B NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'C16 H22 O5' _chem_comp.formula_weight 294.343 _chem_comp.id X3M _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-[2-(4-tert-butylphenyl)ethyl]-2-hydroxybutanedioic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O16 C15 X3M doub 404 n n C15 C14 X3M sing 405 n n C15 O17 X3M sing 406 n n C14 C13 X3M sing 407 n n O19 C18 X3M doub 408 n n C18 O20 X3M sing 409 n n C18 C13 X3M sing 410 n n O21 C13 X3M sing 411 n n C13 C12 X3M sing 412 n n C12 C11 X3M sing 413 n n C11 C08 X3M sing 414 n n C08 C07 X3M doub 415 n y C08 C09 X3M sing 416 n y C07 C06 X3M sing 417 n y C09 C10 X3M doub 418 n y C06 C05 X3M doub 419 n y C10 C05 X3M sing 420 n y C05 C02 X3M sing 421 n n C02 C04 X3M sing 422 n n C02 C03 X3M sing 423 n n C02 C01 X3M sing 424 n n C11 H112 X3M sing 425 n n C11 H111 X3M sing 426 n n C10 H101 X3M sing 427 n n C12 H122 X3M sing 428 n n C12 H121 X3M sing 429 n n C14 H141 X3M sing 430 n n C14 H142 X3M sing 431 n n C01 H013 X3M sing 432 n n C01 H012 X3M sing 433 n n C01 H011 X3M sing 434 n n C03 H033 X3M sing 435 n n C03 H032 X3M sing 436 n n C03 H031 X3M sing 437 n n C04 H043 X3M sing 438 n n C04 H042 X3M sing 439 n n C04 H041 X3M sing 440 n n C06 H061 X3M sing 441 n n C07 H071 X3M sing 442 n n C09 H091 X3M sing 443 n n O17 H1 X3M sing 444 n n O20 H2 X3M sing 445 n n O21 H211 X3M sing 446 n n # _atom_sites.entry_id 7JSJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 601 1080 NAG NAG . D 3 X3M A 1 602 1201 X3M PF2 . E 4 NA A 1 603 503 NA NA . F 4 NA A 1 604 504 NA NA . G 2 NAG B 1 601 1080 NAG NAG . H 3 X3M B 1 602 1101 X3M PF2 . I 4 NA B 1 603 501 NA NA . J 4 NA B 1 604 502 NA NA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 X3M . . . D 3 157.153 158.5 145.088 1 25.77 ? C11 X3M 602 A 1 HETATM 2 C C10 X3M . . . D 3 155.411 158.001 148.431 1 25.77 ? C10 X3M 602 A 1 HETATM 3 C C12 X3M . . . D 3 156.696 159.913 144.728 1 25.77 ? C12 X3M 602 A 1 HETATM 4 C C18 X3M . . . D 3 156.092 161.672 143.043 1 25.77 ? C18 X3M 602 A 1 HETATM 5 C C15 X3M . . . D 3 157.885 158.329 142.036 1 25.77 ? C15 X3M 602 A 1 HETATM 6 C C14 X3M . . . D 3 156.763 159.373 142.222 1 25.77 ? C14 X3M 602 A 1 HETATM 7 C C01 X3M . . . D 3 156.869 157.167 151.508 1 25.77 ? C01 X3M 602 A 1 HETATM 8 C C02 X3M . . . D 3 155.922 156.593 150.469 1 25.77 ? C02 X3M 602 A 1 HETATM 9 C C03 X3M . . . D 3 154.497 156.895 150.924 1 25.77 ? C03 X3M 602 A 1 HETATM 10 C C04 X3M . . . D 3 156.087 155.09 150.522 1 25.77 ? C04 X3M 602 A 1 HETATM 11 C C05 X3M . . . D 3 156.224 157.091 149.101 1 25.77 ? C05 X3M 602 A 1 HETATM 12 C C06 X3M . . . D 3 157.347 156.655 148.422 1 25.77 ? C06 X3M 602 A 1 HETATM 13 C C07 X3M . . . D 3 157.658 157.097 147.142 1 25.77 ? C07 X3M 602 A 1 HETATM 14 C C08 X3M . . . D 3 156.849 158.007 146.468 1 25.77 ? C08 X3M 602 A 1 HETATM 15 C C09 X3M . . . D 3 155.721 158.442 147.153 1 25.77 ? C09 X3M 602 A 1 HETATM 16 C C13 X3M . . . D 3 157.009 160.437 143.304 1 25.77 ? C13 X3M 602 A 1 HETATM 17 O O16 X3M . . . D 3 157.614 157.271 141.416 1 25.77 ? O16 X3M 602 A 1 HETATM 18 O O17 X3M . . . D 3 159.01 158.592 142.518 1 25.77 ? O17 X3M 602 A 1 HETATM 19 O O19 X3M . . . D 3 154.893 161.457 142.756 1 25.77 ? O19 X3M 602 A 1 HETATM 20 O O20 X3M . . . D 3 156.618 162.808 143.143 1 25.77 ? O20 X3M 602 A 1 HETATM 21 O O21 X3M . . . D 3 158.352 160.793 143.271 1 25.77 ? O21 X3M 602 A 1 HETATM 22 H H112 X3M . . . D 3 158.105 158.43 144.931 1 25.77 ? H112 X3M 602 A 1 HETATM 23 H H111 X3M . . . D 3 156.766 157.872 144.465 1 25.77 ? H111 X3M 602 A 1 HETATM 24 H H101 X3M . . . D 3 154.641 158.338 148.82 1 25.77 ? H101 X3M 602 A 1 HETATM 25 H H122 X3M . . . D 3 155.745 159.972 144.885 1 25.77 ? H122 X3M 602 A 1 HETATM 26 H H121 X3M . . . D 3 157.088 160.519 145.371 1 25.77 ? H121 X3M 602 A 1 HETATM 27 H H141 X3M . . . D 3 155.972 158.871 142.426 1 25.77 ? H141 X3M 602 A 1 HETATM 28 H H142 X3M . . . D 3 156.584 159.78 141.377 1 25.77 ? H142 X3M 602 A 1 HETATM 29 H H013 X3M . . . D 3 157.732 156.719 151.518 1 25.77 ? H013 X3M 602 A 1 HETATM 30 H H012 X3M . . . D 3 156.518 157.07 152.406 1 25.77 ? H012 X3M 602 A 1 HETATM 31 H H011 X3M . . . D 3 157.037 158.113 151.384 1 25.77 ? H011 X3M 602 A 1 HETATM 32 H H033 X3M . . . D 3 153.838 156.46 150.366 1 25.77 ? H033 X3M 602 A 1 HETATM 33 H H032 X3M . . . D 3 154.295 157.839 150.94 1 25.77 ? H032 X3M 602 A 1 HETATM 34 H H031 X3M . . . D 3 154.321 156.583 151.82 1 25.77 ? H031 X3M 602 A 1 HETATM 35 H H043 X3M . . . D 3 155.629 154.644 149.802 1 25.77 ? H043 X3M 602 A 1 HETATM 36 H H042 X3M . . . D 3 155.742 154.716 151.338 1 25.77 ? H042 X3M 602 A 1 HETATM 37 H H041 X3M . . . D 3 157.011 154.81 150.482 1 25.77 ? H041 X3M 602 A 1 HETATM 38 H H061 X3M . . . D 3 157.918 156.048 148.826 1 25.77 ? H061 X3M 602 A 1 HETATM 39 H H071 X3M . . . D 3 158.419 156.78 146.723 1 25.77 ? H071 X3M 602 A 1 HETATM 40 H H091 X3M . . . D 3 155.148 159.046 146.752 1 25.77 ? H091 X3M 602 A 1 HETATM 41 H H211 X3M . . . D 3 158.514 161.137 144.028 1 25.77 ? H211 X3M 602 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 405 _model_server_stats.encode_time_ms 52 _model_server_stats.element_count 41 #