data_7JSN # _model_server_result.job_id NUmjmeMYe-sV7ac9OHNqMw _model_server_result.datetime_utc '2024-12-21 12:48:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jsn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":351}' # _entry.id 7JSN # _exptl.entry_id 7JSN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 523.18 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JSN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 O N N ? 9 P N N # _chem_comp.formula 'C10 H16 N5 O14 P3' _chem_comp.formula_weight 523.18 _chem_comp.id GTP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G GTP doub 167 n n PG O2G GTP sing 168 n n PG O3G GTP sing 169 n n PG O3B GTP sing 170 n n O2G HOG2 GTP sing 171 n n O3G HOG3 GTP sing 172 n n O3B PB GTP sing 173 n n PB O1B GTP doub 174 n n PB O2B GTP sing 175 n n PB O3A GTP sing 176 n n O2B HOB2 GTP sing 177 n n O3A PA GTP sing 178 n n PA O1A GTP doub 179 n n PA O2A GTP sing 180 n n PA O5' GTP sing 181 n n O2A HOA2 GTP sing 182 n n O5' C5' GTP sing 183 n n C5' C4' GTP sing 184 n n C5' H5' GTP sing 185 n n C5' "H5''" GTP sing 186 n n C4' O4' GTP sing 187 n n C4' C3' GTP sing 188 n n C4' H4' GTP sing 189 n n O4' C1' GTP sing 190 n n C3' O3' GTP sing 191 n n C3' C2' GTP sing 192 n n C3' H3' GTP sing 193 n n O3' HO3' GTP sing 194 n n C2' O2' GTP sing 195 n n C2' C1' GTP sing 196 n n C2' H2' GTP sing 197 n n O2' HO2' GTP sing 198 n n C1' N9 GTP sing 199 n n C1' H1' GTP sing 200 n n N9 C8 GTP sing 201 n y N9 C4 GTP sing 202 n y C8 N7 GTP doub 203 n y C8 H8 GTP sing 204 n n N7 C5 GTP sing 205 n y C5 C6 GTP sing 206 n n C5 C4 GTP doub 207 n y C6 O6 GTP doub 208 n n C6 N1 GTP sing 209 n n N1 C2 GTP sing 210 n n N1 HN1 GTP sing 211 n n C2 N2 GTP sing 212 n n C2 N3 GTP doub 213 n n N2 HN21 GTP sing 214 n n N2 HN22 GTP sing 215 n n N3 C4 GTP sing 216 n n # _atom_sites.entry_id 7JSN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 ZN A 1 902 902 ZN ZN . H 6 MG A 1 903 903 MG MG . I 7 VDN A 1 904 904 VDN VDN . J 8 35G A 1 905 905 35G 35G . K 5 ZN B 1 902 902 ZN ZN . L 6 MG B 1 903 903 MG MG . M 7 VDN B 1 904 904 VDN VDN . N 8 35G B 1 905 905 35G 35G . O 9 GTP E 1 351 351 GTP GTP . P 9 GTP F 1 351 351 GTP GTP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG GTP . . . P 9 134.064 150.433 95.059 1 176.18 ? PG GTP 351 F 1 HETATM 2 O O1G GTP . . . P 9 134.29 151.92 94.965 1 176.18 ? O1G GTP 351 F 1 HETATM 3 O O2G GTP . . . P 9 134.394 149.951 96.447 1 176.18 ? O2G GTP 351 F 1 HETATM 4 O O3G GTP . . . P 9 134.919 149.716 94.045 1 176.18 ? O3G GTP 351 F 1 HETATM 5 O O3B GTP . . . P 9 132.515 150.13 94.772 1 176.18 ? O3B GTP 351 F 1 HETATM 6 P PB GTP . . . P 9 131.932 150.237 93.283 1 176.18 ? PB GTP 351 F 1 HETATM 7 O O1B GTP . . . P 9 130.428 150.156 93.332 1 176.18 ? O1B GTP 351 F 1 HETATM 8 O O2B GTP . . . P 9 132.382 151.538 92.671 1 176.18 ? O2B GTP 351 F 1 HETATM 9 O O3A GTP . . . P 9 132.551 149 92.454 1 176.18 ? O3A GTP 351 F 1 HETATM 10 P PA GTP . . . P 9 132.863 147.543 93.07 1 176.18 ? PA GTP 351 F 1 HETATM 11 O O1A GTP . . . P 9 134.097 147.01 92.388 1 176.18 ? O1A GTP 351 F 1 HETATM 12 O O2A GTP . . . P 9 133.063 147.553 94.564 1 176.18 ? O2A GTP 351 F 1 HETATM 13 O O5' GTP . . . P 9 131.63 146.581 92.695 1 176.18 ? O5' GTP 351 F 1 HETATM 14 C C5' GTP . . . P 9 131.899 145.401 91.974 1 176.18 ? C5' GTP 351 F 1 HETATM 15 C C4' GTP . . . P 9 131.196 144.227 92.641 1 176.18 ? C4' GTP 351 F 1 HETATM 16 O O4' GTP . . . P 9 129.81 144.463 92.698 1 176.18 ? O4' GTP 351 F 1 HETATM 17 C C3' GTP . . . P 9 131.363 142.926 91.876 1 176.18 ? C3' GTP 351 F 1 HETATM 18 O O3' GTP . . . P 9 132.403 142.159 92.432 1 176.18 ? O3' GTP 351 F 1 HETATM 19 C C2' GTP . . . P 9 130.037 142.211 92.038 1 176.18 ? C2' GTP 351 F 1 HETATM 20 O O2' GTP . . . P 9 130.176 141.106 92.897 1 176.18 ? O2' GTP 351 F 1 HETATM 21 C C1' GTP . . . P 9 129.109 143.237 92.663 1 176.18 ? C1' GTP 351 F 1 HETATM 22 N N9 GTP . . . P 9 127.905 143.395 91.836 1 176.18 ? N9 GTP 351 F 1 HETATM 23 C C8 GTP . . . P 9 127.554 144.523 91.147 1 176.18 ? C8 GTP 351 F 1 HETATM 24 N N7 GTP . . . P 9 126.377 144.292 90.527 1 176.18 ? N7 GTP 351 F 1 HETATM 25 C C5 GTP . . . P 9 125.969 143.041 90.823 1 176.18 ? C5 GTP 351 F 1 HETATM 26 C C6 GTP . . . P 9 124.847 142.319 90.454 1 176.18 ? C6 GTP 351 F 1 HETATM 27 O O6 GTP . . . P 9 124.005 142.826 89.718 1 176.18 ? O6 GTP 351 F 1 HETATM 28 N N1 GTP . . . P 9 124.68 141.035 90.913 1 176.18 ? N1 GTP 351 F 1 HETATM 29 C C2 GTP . . . P 9 125.632 140.478 91.735 1 176.18 ? C2 GTP 351 F 1 HETATM 30 N N2 GTP . . . P 9 125.469 139.238 92.176 1 176.18 ? N2 GTP 351 F 1 HETATM 31 N N3 GTP . . . P 9 126.749 141.2 92.1 1 176.18 ? N3 GTP 351 F 1 HETATM 32 C C4 GTP . . . P 9 126.917 142.464 91.651 1 176.18 ? C4 GTP 351 F 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 32 #