data_7JSO
#
_model_server_result.job_id            zDV5q1Ql6i8PH4cz-lV-KA 
_model_server_result.datetime_utc      '2024-12-27 19:39:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jso 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":700}' 
#
_entry.id    7JSO 
#
_exptl.entry_id    7JSO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              665.441 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.01 
_cell.angle_gamma         90 
_cell.entry_id            7JSO 
_cell.length_a            333.816 
_cell.length_b            161.095 
_cell.length_c            84.999 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7JSO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,I,J,M,N 1 1,2 
B,D,K,L,O,P 2 1,2 
E,G,H,Q,R,U,V,W,X 3 1 
F,S,T 3 3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_756 -x+2,y,-z+1 -1 0 0 0 1 0 0 0 -1 667.617165 0 84.998999 
3 'crystal symmetry operation' 4_747 -x+5/2,y-1/2,-z+2 -1 0 0 0 1 0 0 0 -1 834.51033 -80.5475 169.997997 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
? 2 S N N 
? 2 U N N 
? 2 W N N 
#
_chem_comp.formula           'C21 H29 N7 O14 P2' 
_chem_comp.formula_weight    665.441 
_chem_comp.id                NAI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     NADH 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAI doub 258 n n 
PA O2A NAI sing 259 n n 
PA O5B NAI sing 260 n n 
PA O3 NAI sing 261 n n 
O2A HOA2 NAI sing 262 n n 
O5B C5B NAI sing 263 n n 
C5B C4B NAI sing 264 n n 
C5B H51A NAI sing 265 n n 
C5B H52A NAI sing 266 n n 
C4B O4B NAI sing 267 n n 
C4B C3B NAI sing 268 n n 
C4B H4B NAI sing 269 n n 
O4B C1B NAI sing 270 n n 
C3B O3B NAI sing 271 n n 
C3B C2B NAI sing 272 n n 
C3B H3B NAI sing 273 n n 
O3B HO3A NAI sing 274 n n 
C2B O2B NAI sing 275 n n 
C2B C1B NAI sing 276 n n 
C2B H2B NAI sing 277 n n 
O2B HO2A NAI sing 278 n n 
C1B N9A NAI sing 279 n n 
C1B H1B NAI sing 280 n n 
N9A C8A NAI sing 281 n y 
N9A C4A NAI sing 282 n y 
C8A N7A NAI doub 283 n y 
C8A H8A NAI sing 284 n n 
N7A C5A NAI sing 285 n y 
C5A C6A NAI sing 286 n y 
C5A C4A NAI doub 287 n y 
C6A N6A NAI sing 288 n n 
C6A N1A NAI doub 289 n y 
N6A H61A NAI sing 290 n n 
N6A H62A NAI sing 291 n n 
N1A C2A NAI sing 292 n y 
C2A N3A NAI doub 293 n y 
C2A H2A NAI sing 294 n n 
N3A C4A NAI sing 295 n y 
O3 PN NAI sing 296 n n 
PN O1N NAI sing 297 n n 
PN O2N NAI doub 298 n n 
PN O5D NAI sing 299 n n 
O1N HO1N NAI sing 300 n n 
O5D C5D NAI sing 301 n n 
C5D C4D NAI sing 302 n n 
C5D H51N NAI sing 303 n n 
C5D H52N NAI sing 304 n n 
C4D O4D NAI sing 305 n n 
C4D C3D NAI sing 306 n n 
C4D H4D NAI sing 307 n n 
O4D C1D NAI sing 308 n n 
C3D O3D NAI sing 309 n n 
C3D C2D NAI sing 310 n n 
C3D H3D NAI sing 311 n n 
O3D HO3N NAI sing 312 n n 
C2D O2D NAI sing 313 n n 
C2D C1D NAI sing 314 n n 
C2D H2D NAI sing 315 n n 
O2D HO2N NAI sing 316 n n 
C1D N1N NAI sing 317 n n 
C1D H1D NAI sing 318 n n 
N1N C2N NAI sing 319 n n 
N1N C6N NAI sing 320 n n 
C2N C3N NAI doub 321 n n 
C2N H2N NAI sing 322 n n 
C3N C7N NAI sing 323 n n 
C3N C4N NAI sing 324 n n 
C7N O7N NAI doub 325 n n 
C7N N7N NAI sing 326 n n 
N7N H71N NAI sing 327 n n 
N7N H72N NAI sing 328 n n 
C4N C5N NAI sing 329 n n 
C4N H4N NAI sing 330 n n 
C4N H42N NAI sing 331 n n 
C5N C6N NAI doub 332 n n 
C5N H5N NAI sing 333 n n 
C6N H6N NAI sing 334 n n 
#
_atom_sites.entry_id                     7JSO 
_atom_sites.fract_transf_matrix[1][1]    0.002996 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006208 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011765 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 NAI A 1 700 700 NAI NAI . 
J 3 IAC A 1 701 701 IAC IAA . 
K 2 NAI B 1 700 700 NAI NAI . 
L 3 IAC B 1 701 701 IAC IAA . 
M 2 NAI C 1 700 700 NAI NAI . 
N 3 IAC C 1 701 701 IAC IAA . 
O 2 NAI D 1 700 700 NAI NAI . 
P 3 IAC D 1 701 701 IAC IAA . 
Q 2 NAI E 1 700 700 NAI NAI . 
R 3 IAC E 1 701 701 IAC IAA . 
S 2 NAI F 1 700 700 NAI NAI . 
T 3 IAC F 1 701 701 IAC IAA . 
U 2 NAI G 1 700 700 NAI NAI . 
V 3 IAC G 1 701 701 IAC IAA . 
W 2 NAI H 1 700 700 NAI NAI . 
X 3 IAC H 1 701 701 IAC IAA . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAI . . . W 2 384.371 68.069 89.642 1 75.99 ? PA NAI 700 H 1 
HETATM 2 O O1A NAI . . . W 2 384.729 66.628 89.122 1 81.46 ? O1A NAI 700 H 1 
HETATM 3 O O2A NAI . . . W 2 382.865 68.33 89.683 1 76.23 ? O2A NAI 700 H 1 
HETATM 4 O O5B NAI . . . W 2 385.162 69.224 88.806 1 67.8 ? O5B NAI 700 H 1 
HETATM 5 C C5B NAI . . . W 2 386.436 68.992 88.232 1 54.26 ? C5B NAI 700 H 1 
HETATM 6 C C4B NAI . . . W 2 386.622 69.629 86.779 1 47.43 ? C4B NAI 700 H 1 
HETATM 7 O O4B NAI . . . W 2 385.831 68.784 85.68 1 48.29 ? O4B NAI 700 H 1 
HETATM 8 C C3B NAI . . . W 2 386.157 70.814 86.628 1 41.83 ? C3B NAI 700 H 1 
HETATM 9 O O3B NAI . . . W 2 386.951 71.495 85.533 1 30.99 ? O3B NAI 700 H 1 
HETATM 10 C C2B NAI . . . W 2 384.639 70.641 86.224 1 41.31 ? C2B NAI 700 H 1 
HETATM 11 O O2B NAI . . . W 2 384.202 71.467 85.172 1 30.34 ? O2B NAI 700 H 1 
HETATM 12 C C1B NAI . . . W 2 384.619 69.152 85.991 1 41.2 ? C1B NAI 700 H 1 
HETATM 13 N N9A NAI . . . W 2 383.451 68.385 85.296 1 29.33 ? N9A NAI 700 H 1 
HETATM 14 C C8A NAI . . . W 2 382.278 68.205 85.902 1 26.66 ? C8A NAI 700 H 1 
HETATM 15 N N7A NAI . . . W 2 381.49 67.465 85.122 1 30.81 ? N7A NAI 700 H 1 
HETATM 16 C C5A NAI . . . W 2 382.184 67.13 83.999 1 27.45 ? C5A NAI 700 H 1 
HETATM 17 C C6A NAI . . . W 2 381.871 66.368 82.846 1 23.73 ? C6A NAI 700 H 1 
HETATM 18 N N6A NAI . . . W 2 380.544 65.776 82.72 1 25.39 ? N6A NAI 700 H 1 
HETATM 19 N N1A NAI . . . W 2 382.795 66.221 81.871 1 20.1 ? N1A NAI 700 H 1 
HETATM 20 C C2A NAI . . . W 2 384.004 66.796 82.003 1 16.87 ? C2A NAI 700 H 1 
HETATM 21 N N3A NAI . . . W 2 384.336 67.528 83.072 1 22.24 ? N3A NAI 700 H 1 
HETATM 22 C C4A NAI . . . W 2 383.446 67.708 84.1 1 24.01 ? C4A NAI 700 H 1 
HETATM 23 O O3 NAI . . . W 2 384.973 68.302 91.18 1 91.29 ? O3 NAI 700 H 1 
HETATM 24 P PN NAI . . . W 2 384.765 69.812 91.783 1 105.14 ? PN NAI 700 H 1 
HETATM 25 O O1N NAI . . . W 2 383.295 70.075 91.865 1 101.72 ? O1N NAI 700 H 1 
HETATM 26 O O2N NAI . . . W 2 385.419 70.758 90.908 1 104.38 ? O2N NAI 700 H 1 
HETATM 27 O O5D NAI . . . W 2 385.46 69.9 93.228 1 110.92 ? O5D NAI 700 H 1 
HETATM 28 C C5D NAI . . . W 2 384.657 69.609 94.453 1 115.72 ? C5D NAI 700 H 1 
HETATM 29 C C4D NAI . . . W 2 384.266 68.303 94.499 1 115.77 ? C4D NAI 700 H 1 
HETATM 30 O O4D NAI . . . W 2 385.322 67.275 93.911 1 116.99 ? O4D NAI 700 H 1 
HETATM 31 C C3D NAI . . . W 2 383.993 67.803 95.952 1 110.55 ? C3D NAI 700 H 1 
HETATM 32 O O3D NAI . . . W 2 383.92 68.927 96.94 1 102.35 ? O3D NAI 700 H 1 
HETATM 33 C C2D NAI . . . W 2 384.913 66.812 96.184 1 113.61 ? C2D NAI 700 H 1 
HETATM 34 O O2D NAI . . . W 2 385.48 66.787 97.559 1 117.43 ? O2D NAI 700 H 1 
HETATM 35 C C1D NAI . . . W 2 385.97 66.632 94.892 1 109.53 ? C1D NAI 700 H 1 
HETATM 36 N N1N NAI . . . W 2 387.419 67.018 94.718 1 97.34 ? N1N NAI 700 H 1 
HETATM 37 C C2N NAI . . . W 2 388.494 66.213 94.981 1 88.22 ? C2N NAI 700 H 1 
HETATM 38 C C3N NAI . . . W 2 389.812 66.718 94.676 1 80.69 ? C3N NAI 700 H 1 
HETATM 39 C C7N NAI . . . W 2 391.163 65.933 94.965 1 72.65 ? C7N NAI 700 H 1 
HETATM 40 O O7N NAI . . . W 2 391.954 65.827 94.108 1 64.31 ? O7N NAI 700 H 1 
HETATM 41 N N7N NAI . . . W 2 391.414 65.393 96.343 1 70.57 ? N7N NAI 700 H 1 
HETATM 42 C C4N NAI . . . W 2 390.026 67.955 94.11 1 80.85 ? C4N NAI 700 H 1 
HETATM 43 C C5N NAI . . . W 2 388.89 68.73 93.823 1 86.74 ? C5N NAI 700 H 1 
HETATM 44 C C6N NAI . . . W 2 387.628 68.187 94.131 1 92.88 ? C6N NAI 700 H 1 
#
_model_server_stats.io_time_ms              226 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    118 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           44 
#