data_7JU0 # _model_server_result.job_id 7FTZcsL9nMKmxICFbJavlw _model_server_result.datetime_utc '2024-11-23 18:27:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ju0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 7JU0 # _exptl.entry_id 7JU0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 160.216 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(1H-INDOL-3-YL)ETHANAMINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7JU0 _cell.length_a 114.837 _cell.length_b 114.837 _cell.length_c 230.262 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JU0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C10 H12 N2' _chem_comp.formula_weight 160.216 _chem_comp.id TSS _chem_comp.mon_nstd_flag . _chem_comp.name 2-(1H-INDOL-3-YL)ETHANAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms TRYPTAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA TSS sing 425 n n N1 HN11 TSS sing 426 n n N1 HN12 TSS sing 427 n n CA CB TSS sing 428 n n CA HA1 TSS sing 429 n n CA HA2 TSS sing 430 n n CB CG TSS sing 431 n n CB HB1 TSS sing 432 n n CB HB2 TSS sing 433 n n CG CD1 TSS doub 434 n y CG CD2 TSS sing 435 n y CD1 NE1 TSS sing 436 n y CD1 HD1 TSS sing 437 n n NE1 CE2 TSS sing 438 n y NE1 HE1 TSS sing 439 n n CE2 CD2 TSS sing 440 n y CE2 CZ2 TSS doub 441 n y CD2 CE3 TSS doub 442 n y CZ2 CH2 TSS sing 443 n y CZ2 HZ2 TSS sing 444 n n CH2 CZ3 TSS doub 445 n y CH2 HH2 TSS sing 446 n n CZ3 CE3 TSS sing 447 n y CZ3 HZ3 TSS sing 448 n n CE3 HE3 TSS sing 449 n n # _atom_sites.entry_id 7JU0 _atom_sites.fract_transf_matrix[1][1] 0.008708 _atom_sites.fract_transf_matrix[1][2] 0.005028 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010055 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 600 600 FAD FAD . D 3 TSS A 1 601 601 TSS TSS . E 2 FAD B 1 600 600 FAD FAD . F 3 TSS B 1 601 601 TSS TSS . G 4 HOH A 1 701 38 HOH HOH . G 4 HOH A 2 702 52 HOH HOH . G 4 HOH A 3 703 53 HOH HOH . G 4 HOH A 4 704 23 HOH HOH . G 4 HOH A 5 705 68 HOH HOH . G 4 HOH A 6 706 8 HOH HOH . G 4 HOH A 7 707 26 HOH HOH . G 4 HOH A 8 708 62 HOH HOH . G 4 HOH A 9 709 34 HOH HOH . G 4 HOH A 10 710 28 HOH HOH . G 4 HOH A 11 711 35 HOH HOH . G 4 HOH A 12 712 7 HOH HOH . G 4 HOH A 13 713 44 HOH HOH . G 4 HOH A 14 714 4 HOH HOH . G 4 HOH A 15 715 59 HOH HOH . G 4 HOH A 16 716 10 HOH HOH . G 4 HOH A 17 717 81 HOH HOH . G 4 HOH A 18 718 51 HOH HOH . G 4 HOH A 19 719 79 HOH HOH . G 4 HOH A 20 720 19 HOH HOH . G 4 HOH A 21 721 20 HOH HOH . G 4 HOH A 22 722 3 HOH HOH . G 4 HOH A 23 723 37 HOH HOH . G 4 HOH A 24 724 69 HOH HOH . G 4 HOH A 25 725 5 HOH HOH . G 4 HOH A 26 726 13 HOH HOH . G 4 HOH A 27 727 14 HOH HOH . G 4 HOH A 28 728 25 HOH HOH . G 4 HOH A 29 729 22 HOH HOH . G 4 HOH A 30 730 12 HOH HOH . G 4 HOH A 31 731 9 HOH HOH . G 4 HOH A 32 732 56 HOH HOH . G 4 HOH A 33 733 16 HOH HOH . G 4 HOH A 34 734 60 HOH HOH . G 4 HOH A 35 735 70 HOH HOH . G 4 HOH A 36 736 6 HOH HOH . G 4 HOH A 37 737 71 HOH HOH . G 4 HOH A 38 738 73 HOH HOH . G 4 HOH A 39 739 72 HOH HOH . G 4 HOH A 40 740 58 HOH HOH . G 4 HOH A 41 741 43 HOH HOH . G 4 HOH A 42 742 21 HOH HOH . G 4 HOH A 43 743 1 HOH HOH . G 4 HOH A 44 744 31 HOH HOH . G 4 HOH A 45 745 40 HOH HOH . G 4 HOH A 46 746 66 HOH HOH . G 4 HOH A 47 747 42 HOH HOH . G 4 HOH A 48 748 82 HOH HOH . H 4 HOH B 1 701 32 HOH HOH . H 4 HOH B 2 702 77 HOH HOH . H 4 HOH B 3 703 46 HOH HOH . H 4 HOH B 4 704 48 HOH HOH . H 4 HOH B 5 705 54 HOH HOH . H 4 HOH B 6 706 45 HOH HOH . H 4 HOH B 7 707 50 HOH HOH . H 4 HOH B 8 708 74 HOH HOH . H 4 HOH B 9 709 55 HOH HOH . H 4 HOH B 10 710 57 HOH HOH . H 4 HOH B 11 711 15 HOH HOH . H 4 HOH B 12 712 11 HOH HOH . H 4 HOH B 13 713 63 HOH HOH . H 4 HOH B 14 714 2 HOH HOH . H 4 HOH B 15 715 17 HOH HOH . H 4 HOH B 16 716 47 HOH HOH . H 4 HOH B 17 717 41 HOH HOH . H 4 HOH B 18 718 36 HOH HOH . H 4 HOH B 19 719 49 HOH HOH . H 4 HOH B 20 720 78 HOH HOH . H 4 HOH B 21 721 67 HOH HOH . H 4 HOH B 22 722 65 HOH HOH . H 4 HOH B 23 723 30 HOH HOH . H 4 HOH B 24 724 27 HOH HOH . H 4 HOH B 25 725 33 HOH HOH . H 4 HOH B 26 726 64 HOH HOH . H 4 HOH B 27 727 29 HOH HOH . H 4 HOH B 28 728 24 HOH HOH . H 4 HOH B 29 729 61 HOH HOH . H 4 HOH B 30 730 39 HOH HOH . H 4 HOH B 31 731 76 HOH HOH . H 4 HOH B 32 732 80 HOH HOH . H 4 HOH B 33 733 18 HOH HOH . H 4 HOH B 34 734 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 TSS . . . D 3 -28.324 115.384 -8.863 1 52.01 ? N1 TSS 601 A 1 HETATM 2 C CA TSS . . . D 3 -27.534 114.842 -9.977 1 54 ? CA TSS 601 A 1 HETATM 3 C CB TSS . . . D 3 -26.037 115.021 -9.674 1 54.06 ? CB TSS 601 A 1 HETATM 4 C CG TSS . . . D 3 -25.068 114.178 -10.521 1 55.62 ? CG TSS 601 A 1 HETATM 5 C CD1 TSS . . . D 3 -24.512 114.786 -11.642 1 53.24 ? CD1 TSS 601 A 1 HETATM 6 N NE1 TSS . . . D 3 -23.662 113.894 -12.25 1 50.17 ? NE1 TSS 601 A 1 HETATM 7 C CE2 TSS . . . D 3 -23.671 112.728 -11.514 1 51.76 ? CE2 TSS 601 A 1 HETATM 8 C CD2 TSS . . . D 3 -24.542 112.905 -10.444 1 53.67 ? CD2 TSS 601 A 1 HETATM 9 C CZ2 TSS . . . D 3 -22.994 111.497 -11.689 1 52.2 ? CZ2 TSS 601 A 1 HETATM 10 C CH2 TSS . . . D 3 -23.222 110.46 -10.763 1 54.73 ? CH2 TSS 601 A 1 HETATM 11 C CZ3 TSS . . . D 3 -24.092 110.644 -9.673 1 52.84 ? CZ3 TSS 601 A 1 HETATM 12 C CE3 TSS . . . D 3 -24.753 111.857 -9.511 1 51.65 ? CE3 TSS 601 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #