data_7JU7 # _model_server_result.job_id X5ip6QjbrFzJrhzOs3Ncxw _model_server_result.datetime_utc '2025-01-29 05:57:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ju7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7JU7 # _exptl.entry_id 7JU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 498.642 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Masitinib _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.62 _cell.angle_gamma 90 _cell.entry_id 7JU7 _cell.length_a 98.591 _cell.length_b 81.299 _cell.length_c 51.859 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H30 N6 O S' _chem_comp.formula_weight 498.642 _chem_comp.id G65 _chem_comp.mon_nstd_flag . _chem_comp.name Masitinib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBI CBH G65 sing 92 n n CBI NBD G65 sing 93 n n CBH NBG G65 sing 94 n n CBC NBD G65 sing 95 n n CBC CAZ G65 sing 96 n n CAY CAZ G65 doub 97 n y CAY CAX G65 sing 98 n y NBG CBJ G65 sing 99 n n NBG CBF G65 sing 100 n n NBD CBE G65 sing 101 n n CAZ CBA G65 sing 102 n y CAX CAV G65 doub 103 n y CBE CBF G65 sing 104 n n CBA CBB G65 doub 105 n y CAV CBB G65 sing 106 n y CAV CAU G65 sing 107 n n OAW CAU G65 doub 108 n n CAU NAT G65 sing 109 n n CAH SAI G65 sing 110 n y CAH CAG G65 doub 111 n y NAT CAO G65 sing 112 n n SAI CAJ G65 sing 113 n y NAD CAE G65 doub 114 n y NAD CAC G65 sing 115 n y CAE CAF G65 sing 116 n y CAF CAG G65 sing 117 n n CAF CAA G65 doub 118 n y CAC CAB G65 doub 119 n y CAG NAK G65 sing 120 n y CAB CAA G65 sing 121 n y CAN CAO G65 doub 122 n y CAN CAM G65 sing 123 n y CAJ NAK G65 doub 124 n y CAJ NAL G65 sing 125 n n CAO CAP G65 sing 126 n y NAL CAM G65 sing 127 n n CAM CAR G65 doub 128 n y CAP CAQ G65 doub 129 n y CAR CAQ G65 sing 130 n y CAR CAS G65 sing 131 n n CBE H1 G65 sing 132 n n CBE H2 G65 sing 133 n n CBF H3 G65 sing 134 n n CBF H4 G65 sing 135 n n CBJ H6 G65 sing 136 n n CBJ H7 G65 sing 137 n n CBJ H8 G65 sing 138 n n CBH H9 G65 sing 139 n n CBH H10 G65 sing 140 n n CBI H11 G65 sing 141 n n CBI H12 G65 sing 142 n n CBC H14 G65 sing 143 n n CBC H15 G65 sing 144 n n CBA H16 G65 sing 145 n n CBB H17 G65 sing 146 n n CAY H18 G65 sing 147 n n CAX H19 G65 sing 148 n n NAT H20 G65 sing 149 n n CAN H21 G65 sing 150 n n CAP H22 G65 sing 151 n n CAQ H23 G65 sing 152 n n CAS H24 G65 sing 153 n n CAS H25 G65 sing 154 n n CAS H26 G65 sing 155 n n NAL H27 G65 sing 156 n n CAH H28 G65 sing 157 n n CAA H29 G65 sing 158 n n CAB H30 G65 sing 159 n n CAC H31 G65 sing 160 n n CAE H32 G65 sing 161 n n # _atom_sites.entry_id 7JU7 _atom_sites.fract_transf_matrix[1][1] 0.010143 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004648 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G65 A 1 401 1 G65 G65 . C 3 DMS A 1 402 1 DMS DMS . D 4 GOL A 1 403 1 GOL GOL . E 4 GOL A 1 404 2 GOL GOL . F 5 HOH A 1 501 23 HOH HOH . F 5 HOH A 2 502 105 HOH HOH . F 5 HOH A 3 503 186 HOH HOH . F 5 HOH A 4 504 19 HOH HOH . F 5 HOH A 5 505 189 HOH HOH . F 5 HOH A 6 506 130 HOH HOH . F 5 HOH A 7 507 93 HOH HOH . F 5 HOH A 8 508 26 HOH HOH . F 5 HOH A 9 509 110 HOH HOH . F 5 HOH A 10 510 121 HOH HOH . F 5 HOH A 11 511 64 HOH HOH . F 5 HOH A 12 512 172 HOH HOH . F 5 HOH A 13 513 174 HOH HOH . F 5 HOH A 14 514 42 HOH HOH . F 5 HOH A 15 515 46 HOH HOH . F 5 HOH A 16 516 58 HOH HOH . F 5 HOH A 17 517 41 HOH HOH . F 5 HOH A 18 518 188 HOH HOH . F 5 HOH A 19 519 89 HOH HOH . F 5 HOH A 20 520 167 HOH HOH . F 5 HOH A 21 521 49 HOH HOH . F 5 HOH A 22 522 66 HOH HOH . F 5 HOH A 23 523 83 HOH HOH . F 5 HOH A 24 524 13 HOH HOH . F 5 HOH A 25 525 31 HOH HOH . F 5 HOH A 26 526 139 HOH HOH . F 5 HOH A 27 527 159 HOH HOH . F 5 HOH A 28 528 191 HOH HOH . F 5 HOH A 29 529 119 HOH HOH . F 5 HOH A 30 530 100 HOH HOH . F 5 HOH A 31 531 190 HOH HOH . F 5 HOH A 32 532 51 HOH HOH . F 5 HOH A 33 533 48 HOH HOH . F 5 HOH A 34 534 115 HOH HOH . F 5 HOH A 35 535 8 HOH HOH . F 5 HOH A 36 536 82 HOH HOH . F 5 HOH A 37 537 107 HOH HOH . F 5 HOH A 38 538 128 HOH HOH . F 5 HOH A 39 539 125 HOH HOH . F 5 HOH A 40 540 134 HOH HOH . F 5 HOH A 41 541 85 HOH HOH . F 5 HOH A 42 542 14 HOH HOH . F 5 HOH A 43 543 154 HOH HOH . F 5 HOH A 44 544 183 HOH HOH . F 5 HOH A 45 545 127 HOH HOH . F 5 HOH A 46 546 34 HOH HOH . F 5 HOH A 47 547 135 HOH HOH . F 5 HOH A 48 548 156 HOH HOH . F 5 HOH A 49 549 78 HOH HOH . F 5 HOH A 50 550 68 HOH HOH . F 5 HOH A 51 551 169 HOH HOH . F 5 HOH A 52 552 59 HOH HOH . F 5 HOH A 53 553 180 HOH HOH . F 5 HOH A 54 554 194 HOH HOH . F 5 HOH A 55 555 10 HOH HOH . F 5 HOH A 56 556 99 HOH HOH . F 5 HOH A 57 557 163 HOH HOH . F 5 HOH A 58 558 37 HOH HOH . F 5 HOH A 59 559 75 HOH HOH . F 5 HOH A 60 560 120 HOH HOH . F 5 HOH A 61 561 69 HOH HOH . F 5 HOH A 62 562 157 HOH HOH . F 5 HOH A 63 563 72 HOH HOH . F 5 HOH A 64 564 63 HOH HOH . F 5 HOH A 65 565 166 HOH HOH . F 5 HOH A 66 566 112 HOH HOH . F 5 HOH A 67 567 103 HOH HOH . F 5 HOH A 68 568 7 HOH HOH . F 5 HOH A 69 569 47 HOH HOH . F 5 HOH A 70 570 38 HOH HOH . F 5 HOH A 71 571 6 HOH HOH . F 5 HOH A 72 572 177 HOH HOH . F 5 HOH A 73 573 52 HOH HOH . F 5 HOH A 74 574 171 HOH HOH . F 5 HOH A 75 575 55 HOH HOH . F 5 HOH A 76 576 196 HOH HOH . F 5 HOH A 77 577 56 HOH HOH . F 5 HOH A 78 578 9 HOH HOH . F 5 HOH A 79 579 133 HOH HOH . F 5 HOH A 80 580 150 HOH HOH . F 5 HOH A 81 581 102 HOH HOH . F 5 HOH A 82 582 142 HOH HOH . F 5 HOH A 83 583 62 HOH HOH . F 5 HOH A 84 584 117 HOH HOH . F 5 HOH A 85 585 104 HOH HOH . F 5 HOH A 86 586 50 HOH HOH . F 5 HOH A 87 587 87 HOH HOH . F 5 HOH A 88 588 140 HOH HOH . F 5 HOH A 89 589 175 HOH HOH . F 5 HOH A 90 590 173 HOH HOH . F 5 HOH A 91 591 24 HOH HOH . F 5 HOH A 92 592 123 HOH HOH . F 5 HOH A 93 593 96 HOH HOH . F 5 HOH A 94 594 81 HOH HOH . F 5 HOH A 95 595 15 HOH HOH . F 5 HOH A 96 596 79 HOH HOH . F 5 HOH A 97 597 162 HOH HOH . F 5 HOH A 98 598 25 HOH HOH . F 5 HOH A 99 599 22 HOH HOH . F 5 HOH A 100 600 116 HOH HOH . F 5 HOH A 101 601 161 HOH HOH . F 5 HOH A 102 602 5 HOH HOH . F 5 HOH A 103 603 192 HOH HOH . F 5 HOH A 104 604 30 HOH HOH . F 5 HOH A 105 605 67 HOH HOH . F 5 HOH A 106 606 27 HOH HOH . F 5 HOH A 107 607 80 HOH HOH . F 5 HOH A 108 608 28 HOH HOH . F 5 HOH A 109 609 16 HOH HOH . F 5 HOH A 110 610 84 HOH HOH . F 5 HOH A 111 611 21 HOH HOH . F 5 HOH A 112 612 60 HOH HOH . F 5 HOH A 113 613 32 HOH HOH . F 5 HOH A 114 614 90 HOH HOH . F 5 HOH A 115 615 97 HOH HOH . F 5 HOH A 116 616 195 HOH HOH . F 5 HOH A 117 617 3 HOH HOH . F 5 HOH A 118 618 65 HOH HOH . F 5 HOH A 119 619 106 HOH HOH . F 5 HOH A 120 620 29 HOH HOH . F 5 HOH A 121 621 86 HOH HOH . F 5 HOH A 122 622 132 HOH HOH . F 5 HOH A 123 623 33 HOH HOH . F 5 HOH A 124 624 43 HOH HOH . F 5 HOH A 125 625 92 HOH HOH . F 5 HOH A 126 626 54 HOH HOH . F 5 HOH A 127 627 170 HOH HOH . F 5 HOH A 128 628 178 HOH HOH . F 5 HOH A 129 629 109 HOH HOH . F 5 HOH A 130 630 165 HOH HOH . F 5 HOH A 131 631 70 HOH HOH . F 5 HOH A 132 632 153 HOH HOH . F 5 HOH A 133 633 122 HOH HOH . F 5 HOH A 134 634 12 HOH HOH . F 5 HOH A 135 635 17 HOH HOH . F 5 HOH A 136 636 4 HOH HOH . F 5 HOH A 137 637 40 HOH HOH . F 5 HOH A 138 638 77 HOH HOH . F 5 HOH A 139 639 2 HOH HOH . F 5 HOH A 140 640 71 HOH HOH . F 5 HOH A 141 641 101 HOH HOH . F 5 HOH A 142 642 160 HOH HOH . F 5 HOH A 143 643 98 HOH HOH . F 5 HOH A 144 644 124 HOH HOH . F 5 HOH A 145 645 74 HOH HOH . F 5 HOH A 146 646 158 HOH HOH . F 5 HOH A 147 647 76 HOH HOH . F 5 HOH A 148 648 35 HOH HOH . F 5 HOH A 149 649 164 HOH HOH . F 5 HOH A 150 650 36 HOH HOH . F 5 HOH A 151 651 1 HOH HOH . F 5 HOH A 152 652 91 HOH HOH . F 5 HOH A 153 653 114 HOH HOH . F 5 HOH A 154 654 44 HOH HOH . F 5 HOH A 155 655 11 HOH HOH . F 5 HOH A 156 656 20 HOH HOH . F 5 HOH A 157 657 168 HOH HOH . F 5 HOH A 158 658 143 HOH HOH . F 5 HOH A 159 659 88 HOH HOH . F 5 HOH A 160 660 111 HOH HOH . F 5 HOH A 161 661 39 HOH HOH . F 5 HOH A 162 662 152 HOH HOH . F 5 HOH A 163 663 61 HOH HOH . F 5 HOH A 164 664 118 HOH HOH . F 5 HOH A 165 665 18 HOH HOH . F 5 HOH A 166 666 151 HOH HOH . F 5 HOH A 167 667 146 HOH HOH . F 5 HOH A 168 668 155 HOH HOH . F 5 HOH A 169 669 193 HOH HOH . F 5 HOH A 170 670 187 HOH HOH . F 5 HOH A 171 671 136 HOH HOH . F 5 HOH A 172 672 141 HOH HOH . F 5 HOH A 173 673 129 HOH HOH . F 5 HOH A 174 674 45 HOH HOH . F 5 HOH A 175 675 197 HOH HOH . F 5 HOH A 176 676 131 HOH HOH . F 5 HOH A 177 677 95 HOH HOH . F 5 HOH A 178 678 185 HOH HOH . F 5 HOH A 179 679 181 HOH HOH . F 5 HOH A 180 680 145 HOH HOH . F 5 HOH A 181 681 108 HOH HOH . F 5 HOH A 182 682 184 HOH HOH . F 5 HOH A 183 683 53 HOH HOH . F 5 HOH A 184 684 176 HOH HOH . F 5 HOH A 185 685 138 HOH HOH . F 5 HOH A 186 686 179 HOH HOH . F 5 HOH A 187 687 149 HOH HOH . F 5 HOH A 188 688 182 HOH HOH . F 5 HOH A 189 689 144 HOH HOH . F 5 HOH A 190 690 113 HOH HOH . F 5 HOH A 191 691 126 HOH HOH . F 5 HOH A 192 692 57 HOH HOH . F 5 HOH A 193 693 137 HOH HOH . F 5 HOH A 194 694 147 HOH HOH . F 5 HOH A 195 695 94 HOH HOH . F 5 HOH A 196 696 73 HOH HOH . F 5 HOH A 197 697 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBE G65 . . . B 2 19.094 8.365 27.847 1 77.09 ? CBE G65 401 A 1 HETATM 2 C CBF G65 . . . B 2 19.674 9.471 26.997 1 74.43 ? CBF G65 401 A 1 HETATM 3 N NBG G65 . . . B 2 18.824 10.66 27.002 1 70.56 ? NBG G65 401 A 1 HETATM 4 C CBJ G65 . . . B 2 18.751 11.245 28.342 1 69.75 ? CBJ G65 401 A 1 HETATM 5 C CBH G65 . . . B 2 17.495 10.306 26.517 1 64.37 ? CBH G65 401 A 1 HETATM 6 C CBI G65 . . . B 2 16.895 9.217 27.375 1 73.15 ? CBI G65 401 A 1 HETATM 7 N NBD G65 . . . B 2 17.737 8.014 27.418 1 77.18 ? NBD G65 401 A 1 HETATM 8 C CBC G65 . . . B 2 17.716 7.261 26.154 1 75.73 ? CBC G65 401 A 1 HETATM 9 C CAZ G65 . . . B 2 16.563 6.281 26.051 1 75.69 ? CAZ G65 401 A 1 HETATM 10 C CBA G65 . . . B 2 15.307 6.699 25.625 1 71.36 ? CBA G65 401 A 1 HETATM 11 C CBB G65 . . . B 2 14.247 5.813 25.539 1 67.19 ? CBB G65 401 A 1 HETATM 12 C CAY G65 . . . B 2 16.724 4.941 26.392 1 78.37 ? CAY G65 401 A 1 HETATM 13 C CAX G65 . . . B 2 15.663 4.052 26.303 1 76.42 ? CAX G65 401 A 1 HETATM 14 C CAV G65 . . . B 2 14.411 4.481 25.883 1 69.7 ? CAV G65 401 A 1 HETATM 15 C CAU G65 . . . B 2 13.255 3.534 25.777 1 65.57 ? CAU G65 401 A 1 HETATM 16 O OAW G65 . . . B 2 13.404 2.331 25.974 1 66.33 ? OAW G65 401 A 1 HETATM 17 N NAT G65 . . . B 2 12.057 4.078 25.455 1 53.77 ? NAT G65 401 A 1 HETATM 18 C CAO G65 . . . B 2 10.854 3.364 25.27 1 47.55 ? CAO G65 401 A 1 HETATM 19 C CAN G65 . . . B 2 10.549 2.837 24.018 1 47.78 ? CAN G65 401 A 1 HETATM 20 C CAP G65 . . . B 2 9.995 3.145 26.342 1 43.11 ? CAP G65 401 A 1 HETATM 21 C CAQ G65 . . . B 2 8.829 2.422 26.155 1 43.11 ? CAQ G65 401 A 1 HETATM 22 C CAR G65 . . . B 2 8.5 1.89 24.902 1 42.17 ? CAR G65 401 A 1 HETATM 23 C CAS G65 . . . B 2 7.223 1.12 24.722 1 39.92 ? CAS G65 401 A 1 HETATM 24 C CAM G65 . . . B 2 9.37 2.115 23.831 1 43.94 ? CAM G65 401 A 1 HETATM 25 N NAL G65 . . . B 2 9.036 1.58 22.565 1 39.16 ? NAL G65 401 A 1 HETATM 26 C CAJ G65 . . . B 2 9.869 1.115 21.596 1 41.12 ? CAJ G65 401 A 1 HETATM 27 N NAK G65 . . . B 2 9.456 0.846 20.388 1 42.81 ? NAK G65 401 A 1 HETATM 28 S SAI G65 . . . B 2 11.552 0.787 21.875 1 55 ? SAI G65 401 A 1 HETATM 29 C CAH G65 . . . B 2 11.659 0.124 20.287 1 45.81 ? CAH G65 401 A 1 HETATM 30 C CAG G65 . . . B 2 10.462 0.215 19.65 1 40.63 ? CAG G65 401 A 1 HETATM 31 C CAF G65 . . . B 2 10.123 -0.304 18.311 1 32.59 ? CAF G65 401 A 1 HETATM 32 C CAA G65 . . . B 2 11.041 -0.985 17.514 1 36.84 ? CAA G65 401 A 1 HETATM 33 C CAB G65 . . . B 2 10.657 -1.479 16.279 1 34.15 ? CAB G65 401 A 1 HETATM 34 C CAC G65 . . . B 2 9.352 -1.273 15.869 1 32.7 ? CAC G65 401 A 1 HETATM 35 N NAD G65 . . . B 2 8.449 -0.625 16.612 1 25.62 ? NAD G65 401 A 1 HETATM 36 C CAE G65 . . . B 2 8.837 -0.16 17.812 1 32.61 ? CAE G65 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #