data_7JU7 # _model_server_result.job_id zt2X8-3uhfSW_enFvUkfhg _model_server_result.datetime_utc '2024-11-21 08:49:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ju7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 7JU7 # _exptl.entry_id 7JU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.62 _cell.angle_gamma 90 _cell.entry_id 7JU7 _cell.length_a 98.591 _cell.length_b 81.299 _cell.length_c 51.859 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 208 n n C1 C2 GOL sing 209 n n C1 H11 GOL sing 210 n n C1 H12 GOL sing 211 n n O1 HO1 GOL sing 212 n n C2 O2 GOL sing 213 n n C2 C3 GOL sing 214 n n C2 H2 GOL sing 215 n n O2 HO2 GOL sing 216 n n C3 O3 GOL sing 217 n n C3 H31 GOL sing 218 n n C3 H32 GOL sing 219 n n O3 HO3 GOL sing 220 n n # _atom_sites.entry_id 7JU7 _atom_sites.fract_transf_matrix[1][1] 0.010143 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004648 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G65 A 1 401 1 G65 G65 . C 3 DMS A 1 402 1 DMS DMS . D 4 GOL A 1 403 1 GOL GOL . E 4 GOL A 1 404 2 GOL GOL . F 5 HOH A 1 501 23 HOH HOH . F 5 HOH A 2 502 105 HOH HOH . F 5 HOH A 3 503 186 HOH HOH . F 5 HOH A 4 504 19 HOH HOH . F 5 HOH A 5 505 189 HOH HOH . F 5 HOH A 6 506 130 HOH HOH . F 5 HOH A 7 507 93 HOH HOH . F 5 HOH A 8 508 26 HOH HOH . F 5 HOH A 9 509 110 HOH HOH . F 5 HOH A 10 510 121 HOH HOH . F 5 HOH A 11 511 64 HOH HOH . F 5 HOH A 12 512 172 HOH HOH . F 5 HOH A 13 513 174 HOH HOH . F 5 HOH A 14 514 42 HOH HOH . F 5 HOH A 15 515 46 HOH HOH . F 5 HOH A 16 516 58 HOH HOH . F 5 HOH A 17 517 41 HOH HOH . F 5 HOH A 18 518 188 HOH HOH . F 5 HOH A 19 519 89 HOH HOH . F 5 HOH A 20 520 167 HOH HOH . F 5 HOH A 21 521 49 HOH HOH . F 5 HOH A 22 522 66 HOH HOH . F 5 HOH A 23 523 83 HOH HOH . F 5 HOH A 24 524 13 HOH HOH . F 5 HOH A 25 525 31 HOH HOH . F 5 HOH A 26 526 139 HOH HOH . F 5 HOH A 27 527 159 HOH HOH . F 5 HOH A 28 528 191 HOH HOH . F 5 HOH A 29 529 119 HOH HOH . F 5 HOH A 30 530 100 HOH HOH . F 5 HOH A 31 531 190 HOH HOH . F 5 HOH A 32 532 51 HOH HOH . F 5 HOH A 33 533 48 HOH HOH . F 5 HOH A 34 534 115 HOH HOH . F 5 HOH A 35 535 8 HOH HOH . F 5 HOH A 36 536 82 HOH HOH . F 5 HOH A 37 537 107 HOH HOH . F 5 HOH A 38 538 128 HOH HOH . F 5 HOH A 39 539 125 HOH HOH . F 5 HOH A 40 540 134 HOH HOH . F 5 HOH A 41 541 85 HOH HOH . F 5 HOH A 42 542 14 HOH HOH . F 5 HOH A 43 543 154 HOH HOH . F 5 HOH A 44 544 183 HOH HOH . F 5 HOH A 45 545 127 HOH HOH . F 5 HOH A 46 546 34 HOH HOH . F 5 HOH A 47 547 135 HOH HOH . F 5 HOH A 48 548 156 HOH HOH . F 5 HOH A 49 549 78 HOH HOH . F 5 HOH A 50 550 68 HOH HOH . F 5 HOH A 51 551 169 HOH HOH . F 5 HOH A 52 552 59 HOH HOH . F 5 HOH A 53 553 180 HOH HOH . F 5 HOH A 54 554 194 HOH HOH . F 5 HOH A 55 555 10 HOH HOH . F 5 HOH A 56 556 99 HOH HOH . F 5 HOH A 57 557 163 HOH HOH . F 5 HOH A 58 558 37 HOH HOH . F 5 HOH A 59 559 75 HOH HOH . F 5 HOH A 60 560 120 HOH HOH . F 5 HOH A 61 561 69 HOH HOH . F 5 HOH A 62 562 157 HOH HOH . F 5 HOH A 63 563 72 HOH HOH . F 5 HOH A 64 564 63 HOH HOH . F 5 HOH A 65 565 166 HOH HOH . F 5 HOH A 66 566 112 HOH HOH . F 5 HOH A 67 567 103 HOH HOH . F 5 HOH A 68 568 7 HOH HOH . F 5 HOH A 69 569 47 HOH HOH . F 5 HOH A 70 570 38 HOH HOH . F 5 HOH A 71 571 6 HOH HOH . F 5 HOH A 72 572 177 HOH HOH . F 5 HOH A 73 573 52 HOH HOH . F 5 HOH A 74 574 171 HOH HOH . F 5 HOH A 75 575 55 HOH HOH . F 5 HOH A 76 576 196 HOH HOH . F 5 HOH A 77 577 56 HOH HOH . F 5 HOH A 78 578 9 HOH HOH . F 5 HOH A 79 579 133 HOH HOH . F 5 HOH A 80 580 150 HOH HOH . F 5 HOH A 81 581 102 HOH HOH . F 5 HOH A 82 582 142 HOH HOH . F 5 HOH A 83 583 62 HOH HOH . F 5 HOH A 84 584 117 HOH HOH . F 5 HOH A 85 585 104 HOH HOH . F 5 HOH A 86 586 50 HOH HOH . F 5 HOH A 87 587 87 HOH HOH . F 5 HOH A 88 588 140 HOH HOH . F 5 HOH A 89 589 175 HOH HOH . F 5 HOH A 90 590 173 HOH HOH . F 5 HOH A 91 591 24 HOH HOH . F 5 HOH A 92 592 123 HOH HOH . F 5 HOH A 93 593 96 HOH HOH . F 5 HOH A 94 594 81 HOH HOH . F 5 HOH A 95 595 15 HOH HOH . F 5 HOH A 96 596 79 HOH HOH . F 5 HOH A 97 597 162 HOH HOH . F 5 HOH A 98 598 25 HOH HOH . F 5 HOH A 99 599 22 HOH HOH . F 5 HOH A 100 600 116 HOH HOH . F 5 HOH A 101 601 161 HOH HOH . F 5 HOH A 102 602 5 HOH HOH . F 5 HOH A 103 603 192 HOH HOH . F 5 HOH A 104 604 30 HOH HOH . F 5 HOH A 105 605 67 HOH HOH . F 5 HOH A 106 606 27 HOH HOH . F 5 HOH A 107 607 80 HOH HOH . F 5 HOH A 108 608 28 HOH HOH . F 5 HOH A 109 609 16 HOH HOH . F 5 HOH A 110 610 84 HOH HOH . F 5 HOH A 111 611 21 HOH HOH . F 5 HOH A 112 612 60 HOH HOH . F 5 HOH A 113 613 32 HOH HOH . F 5 HOH A 114 614 90 HOH HOH . F 5 HOH A 115 615 97 HOH HOH . F 5 HOH A 116 616 195 HOH HOH . F 5 HOH A 117 617 3 HOH HOH . F 5 HOH A 118 618 65 HOH HOH . F 5 HOH A 119 619 106 HOH HOH . F 5 HOH A 120 620 29 HOH HOH . F 5 HOH A 121 621 86 HOH HOH . F 5 HOH A 122 622 132 HOH HOH . F 5 HOH A 123 623 33 HOH HOH . F 5 HOH A 124 624 43 HOH HOH . F 5 HOH A 125 625 92 HOH HOH . F 5 HOH A 126 626 54 HOH HOH . F 5 HOH A 127 627 170 HOH HOH . F 5 HOH A 128 628 178 HOH HOH . F 5 HOH A 129 629 109 HOH HOH . F 5 HOH A 130 630 165 HOH HOH . F 5 HOH A 131 631 70 HOH HOH . F 5 HOH A 132 632 153 HOH HOH . F 5 HOH A 133 633 122 HOH HOH . F 5 HOH A 134 634 12 HOH HOH . F 5 HOH A 135 635 17 HOH HOH . F 5 HOH A 136 636 4 HOH HOH . F 5 HOH A 137 637 40 HOH HOH . F 5 HOH A 138 638 77 HOH HOH . F 5 HOH A 139 639 2 HOH HOH . F 5 HOH A 140 640 71 HOH HOH . F 5 HOH A 141 641 101 HOH HOH . F 5 HOH A 142 642 160 HOH HOH . F 5 HOH A 143 643 98 HOH HOH . F 5 HOH A 144 644 124 HOH HOH . F 5 HOH A 145 645 74 HOH HOH . F 5 HOH A 146 646 158 HOH HOH . F 5 HOH A 147 647 76 HOH HOH . F 5 HOH A 148 648 35 HOH HOH . F 5 HOH A 149 649 164 HOH HOH . F 5 HOH A 150 650 36 HOH HOH . F 5 HOH A 151 651 1 HOH HOH . F 5 HOH A 152 652 91 HOH HOH . F 5 HOH A 153 653 114 HOH HOH . F 5 HOH A 154 654 44 HOH HOH . F 5 HOH A 155 655 11 HOH HOH . F 5 HOH A 156 656 20 HOH HOH . F 5 HOH A 157 657 168 HOH HOH . F 5 HOH A 158 658 143 HOH HOH . F 5 HOH A 159 659 88 HOH HOH . F 5 HOH A 160 660 111 HOH HOH . F 5 HOH A 161 661 39 HOH HOH . F 5 HOH A 162 662 152 HOH HOH . F 5 HOH A 163 663 61 HOH HOH . F 5 HOH A 164 664 118 HOH HOH . F 5 HOH A 165 665 18 HOH HOH . F 5 HOH A 166 666 151 HOH HOH . F 5 HOH A 167 667 146 HOH HOH . F 5 HOH A 168 668 155 HOH HOH . F 5 HOH A 169 669 193 HOH HOH . F 5 HOH A 170 670 187 HOH HOH . F 5 HOH A 171 671 136 HOH HOH . F 5 HOH A 172 672 141 HOH HOH . F 5 HOH A 173 673 129 HOH HOH . F 5 HOH A 174 674 45 HOH HOH . F 5 HOH A 175 675 197 HOH HOH . F 5 HOH A 176 676 131 HOH HOH . F 5 HOH A 177 677 95 HOH HOH . F 5 HOH A 178 678 185 HOH HOH . F 5 HOH A 179 679 181 HOH HOH . F 5 HOH A 180 680 145 HOH HOH . F 5 HOH A 181 681 108 HOH HOH . F 5 HOH A 182 682 184 HOH HOH . F 5 HOH A 183 683 53 HOH HOH . F 5 HOH A 184 684 176 HOH HOH . F 5 HOH A 185 685 138 HOH HOH . F 5 HOH A 186 686 179 HOH HOH . F 5 HOH A 187 687 149 HOH HOH . F 5 HOH A 188 688 182 HOH HOH . F 5 HOH A 189 689 144 HOH HOH . F 5 HOH A 190 690 113 HOH HOH . F 5 HOH A 191 691 126 HOH HOH . F 5 HOH A 192 692 57 HOH HOH . F 5 HOH A 193 693 137 HOH HOH . F 5 HOH A 194 694 147 HOH HOH . F 5 HOH A 195 695 94 HOH HOH . F 5 HOH A 196 696 73 HOH HOH . F 5 HOH A 197 697 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 2.614 5.712 35.552 1 39.44 ? C1 GOL 403 A 1 HETATM 2 O O1 GOL . . . D 4 3.777 5.615 34.855 1 44.28 ? O1 GOL 403 A 1 HETATM 3 C C2 GOL . . . D 4 1.968 6.981 35.059 1 41.07 ? C2 GOL 403 A 1 HETATM 4 O O2 GOL . . . D 4 0.668 6.789 34.487 1 52.04 ? O2 GOL 403 A 1 HETATM 5 C C3 GOL . . . D 4 2.036 7.913 36.286 1 41.07 ? C3 GOL 403 A 1 HETATM 6 O O3 GOL . . . D 4 1.192 8.979 36.036 1 47.59 ? O3 GOL 403 A 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #