data_7JUX
#
_model_server_result.job_id            M-svmv4P8chwmMpHcZSOwA 
_model_server_result.datetime_utc      '2024-11-29 04:21:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jux 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":402}' 
#
_entry.id    7JUX 
#
_exptl.entry_id    7JUX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              615.395 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Trametinib 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7JUX 
_cell.length_a            137.47 
_cell.length_b            137.47 
_cell.length_c            221.8 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7JUX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 185 A ASP 750 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc2 C O1B ANP . A ANP 901 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc3 C O2A ANP . A ANP 901 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
#
_chem_comp.formula           'C26 H23 F I N5 O4' 
_chem_comp.formula_weight    615.395 
_chem_comp.id                QOM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Trametinib 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     N-(3-{3-cyclopropyl-5-[(2-fluoro-4-iodophenyl)amino]-6,8-dimethyl-2,4,7-trioxo-3,4,6,7-tetrahydropyrido[4,3-d]pyrimidin-1(2H)-yl}phenyl)acetamide 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N31 C32 QOM sing 327 n n 
N31 C29 QOM sing 328 n n 
C34 C32 QOM sing 329 n n 
C32 O33 QOM doub 330 n n 
C29 C30 QOM doub 331 n y 
C29 C28 QOM sing 332 n y 
C30 C25 QOM sing 333 n y 
C01 C02 QOM sing 334 n n 
C28 C27 QOM doub 335 n y 
O08 C07 QOM doub 336 n n 
C25 C26 QOM doub 337 n y 
C25 N24 QOM sing 338 n n 
C02 C07 QOM sing 339 n n 
C02 C03 QOM doub 340 n n 
C27 C26 QOM sing 341 n y 
C07 N06 QOM sing 342 n n 
N24 C03 QOM sing 343 n n 
N24 C22 QOM sing 344 n n 
C03 C04 QOM sing 345 n n 
N06 C09 QOM sing 346 n n 
N06 C05 QOM sing 347 n n 
O23 C22 QOM doub 348 n n 
C22 N21 QOM sing 349 n n 
C04 C05 QOM doub 350 n n 
C04 C19 QOM sing 351 n n 
C05 N10 QOM sing 352 n n 
C36 C35 QOM sing 353 n n 
C36 C37 QOM sing 354 n n 
N21 C19 QOM sing 355 n n 
N21 C35 QOM sing 356 n n 
C19 O20 QOM doub 357 n n 
N10 C11 QOM sing 358 n n 
F18 C12 QOM sing 359 n n 
C35 C37 QOM sing 360 n n 
C11 C12 QOM doub 361 n y 
C11 C16 QOM sing 362 n y 
C12 C13 QOM sing 363 n y 
C16 C15 QOM doub 364 n y 
C13 C14 QOM doub 365 n y 
C15 C14 QOM sing 366 n y 
C14 I17 QOM sing 367 n n 
C13 H1 QOM sing 368 n n 
C15 H2 QOM sing 369 n n 
C26 H3 QOM sing 370 n n 
C28 H4 QOM sing 371 n n 
C01 H5 QOM sing 372 n n 
C01 H6 QOM sing 373 n n 
C01 H7 QOM sing 374 n n 
C09 H9 QOM sing 375 n n 
C09 H10 QOM sing 376 n n 
C09 H11 QOM sing 377 n n 
C16 H12 QOM sing 378 n n 
C27 H13 QOM sing 379 n n 
C30 H14 QOM sing 380 n n 
C34 H15 QOM sing 381 n n 
C34 H16 QOM sing 382 n n 
C34 H17 QOM sing 383 n n 
C35 H18 QOM sing 384 n n 
C36 H19 QOM sing 385 n n 
C36 H20 QOM sing 386 n n 
C37 H21 QOM sing 387 n n 
C37 H22 QOM sing 388 n n 
N31 H23 QOM sing 389 n n 
N10 H8 QOM sing 390 n n 
#
_atom_sites.entry_id                     7JUX 
_atom_sites.fract_transf_matrix[1][1]    0.007274 
_atom_sites.fract_transf_matrix[1][2]    0.0042 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0084 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004509 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ANP A 1 901 901 ANP ANP . 
D 4 MG A 1 902 1001 MG MG . 
E 3 ANP C 1 401 401 ANP ANP . 
F 5 QOM C 1 402 501 QOM ZTR . 
G 6 HOH A 1 1101 1101 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 QOM . . . F 5 -15.114 35.908 9.598 1 193.34 ? C13 QOM 402 C 1 
HETATM 2 C C15 QOM . . . F 5 -14.732 36.717 11.833 1 187.61 ? C15 QOM 402 C 1 
HETATM 3 C C22 QOM . . . F 5 -17.089 42.664 7.571 1 165.08 ? C22 QOM 402 C 1 
HETATM 4 C C26 QOM . . . F 5 -18.547 44.12 9.708 1 159.43 ? C26 QOM 402 C 1 
HETATM 5 C C28 QOM . . . F 5 -19.084 46.443 9.784 1 165.9 ? C28 QOM 402 C 1 
HETATM 6 C C01 QOM . . . F 5 -15.68 44.474 11.523 1 166.44 ? C01 QOM 402 C 1 
HETATM 7 C C02 QOM . . . F 5 -15.236 43.157 10.859 1 167.28 ? C02 QOM 402 C 1 
HETATM 8 C C03 QOM . . . F 5 -15.741 42.64 9.575 1 162.53 ? C03 QOM 402 C 1 
HETATM 9 C C04 QOM . . . F 5 -15.191 41.439 9.175 1 157.44 ? C04 QOM 402 C 1 
HETATM 10 C C05 QOM . . . F 5 -14.197 40.73 9.949 1 160.14 ? C05 QOM 402 C 1 
HETATM 11 C C07 QOM . . . F 5 -14.261 42.427 11.582 1 163.14 ? C07 QOM 402 C 1 
HETATM 12 C C09 QOM . . . F 5 -12.755 40.597 11.953 1 163.68 ? C09 QOM 402 C 1 
HETATM 13 C C11 QOM . . . F 5 -14.198 38.13 9.924 1 171.11 ? C11 QOM 402 C 1 
HETATM 14 C C12 QOM . . . F 5 -14.633 37.112 9.063 1 177.81 ? C12 QOM 402 C 1 
HETATM 15 C C14 QOM . . . F 5 -15.159 35.715 10.983 1 202.38 ? C14 QOM 402 C 1 
HETATM 16 C C16 QOM . . . F 5 -14.256 37.9 11.297 1 177.1 ? C16 QOM 402 C 1 
HETATM 17 C C19 QOM . . . F 5 -15.631 40.872 7.933 1 157.72 ? C19 QOM 402 C 1 
HETATM 18 C C25 QOM . . . F 5 -17.374 44.389 8.991 1 166.66 ? C25 QOM 402 C 1 
HETATM 19 C C27 QOM . . . F 5 -19.407 45.132 10.112 1 159.44 ? C27 QOM 402 C 1 
HETATM 20 C C29 QOM . . . F 5 -17.921 46.75 9.067 1 174.33 ? C29 QOM 402 C 1 
HETATM 21 C C30 QOM . . . F 5 -17.049 45.716 8.655 1 170.32 ? C30 QOM 402 C 1 
HETATM 22 C C32 QOM . . . F 5 -18.53 49.3 9.016 1 171.58 ? C32 QOM 402 C 1 
HETATM 23 C C34 QOM . . . F 5 -18.091 50.719 8.608 1 165.53 ? C34 QOM 402 C 1 
HETATM 24 C C35 QOM . . . F 5 -17.007 40.938 5.896 1 163.17 ? C35 QOM 402 C 1 
HETATM 25 C C36 QOM . . . F 5 -16.235 40.154 4.832 1 155.93 ? C36 QOM 402 C 1 
HETATM 26 C C37 QOM . . . F 5 -16.772 41.538 4.499 1 154.46 ? C37 QOM 402 C 1 
HETATM 27 F F18 QOM . . . F 5 -14.598 37.28 7.705 1 170.82 ? F18 QOM 402 C 1 
HETATM 28 I I17 QOM . . . F 5 -15.865 33.933 11.861 1 374.22 ? I17 QOM 402 C 1 
HETATM 29 N N06 QOM . . . F 5 -13.773 41.258 11.122 1 160.1 ? N06 QOM 402 C 1 
HETATM 30 N N10 QOM . . . F 5 -13.668 39.435 9.439 1 165.15 ? N10 QOM 402 C 1 
HETATM 31 N N21 QOM . . . F 5 -16.559 41.493 7.187 1 164.96 ? N21 QOM 402 C 1 
HETATM 32 N N24 QOM . . . F 5 -16.692 43.258 8.711 1 165.3 ? N24 QOM 402 C 1 
HETATM 33 N N31 QOM . . . F 5 -17.626 48.161 8.738 1 177.29 ? N31 QOM 402 C 1 
HETATM 34 O O08 QOM . . . F 5 -13.853 42.845 12.623 1 158.05 ? O08 QOM 402 C 1 
HETATM 35 O O20 QOM . . . F 5 -15.156 39.838 7.595 1 151.39 ? O20 QOM 402 C 1 
HETATM 36 O O23 QOM . . . F 5 -17.908 43.2 6.889 1 160.98 ? O23 QOM 402 C 1 
HETATM 37 O O33 QOM . . . F 5 -19.589 49.176 9.546 1 156.26 ? O33 QOM 402 C 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           37 
#