data_7JV0 # _model_server_result.job_id piCVG2ExvgJJG65A88T8HA _model_server_result.datetime_utc '2024-11-05 08:32:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jv0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 7JV0 # _exptl.entry_id 7JV0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.193 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{[(2R)-2,3-dihydroxypropyl]oxy}-3,4-difluoro-2-[(2-fluoro-4-iodophenyl)amino]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7JV0 _cell.length_a 137.66 _cell.length_b 137.66 _cell.length_c 220.89 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JV0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 168 A ASP 733 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.863 ? metalc ? metalc2 C O2G ANP . A ANP 901 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? # _chem_comp.formula 'C16 H14 F3 I N2 O4' _chem_comp.formula_weight 482.193 _chem_comp.id 4BM _chem_comp.mon_nstd_flag . _chem_comp.name N-{[(2R)-2,3-dihydroxypropyl]oxy}-3,4-difluoro-2-[(2-fluoro-4-iodophenyl)amino]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 4BM doub 1 n y C01 C06 4BM sing 2 n y C01 N07 4BM sing 3 n n C02 C03 4BM sing 4 n y C03 C04 4BM doub 5 n y C04 C05 4BM sing 6 n y C04 I23 4BM sing 7 n n C05 C06 4BM doub 8 n y C06 F24 4BM sing 9 n n N07 C08 4BM sing 10 n n C08 C09 4BM doub 11 n y C08 C13 4BM sing 12 n y C09 C10 4BM sing 13 n y C09 C14 4BM sing 14 n n C10 C11 4BM doub 15 n y C11 C12 4BM sing 16 n y C12 C13 4BM doub 17 n y C12 F26 4BM sing 18 n n C13 F25 4BM sing 19 n n C14 N15 4BM sing 20 n n C14 O16 4BM doub 21 n n N15 O17 4BM sing 22 n n O17 C18 4BM sing 23 n n C18 C19 4BM sing 24 n n C19 C20 4BM sing 25 n n C19 O21 4BM sing 26 n n C20 O22 4BM sing 27 n n C02 H02 4BM sing 28 n n C03 H03 4BM sing 29 n n C05 H05 4BM sing 30 n n N07 HN07 4BM sing 31 n n C10 H10 4BM sing 32 n n C11 H11 4BM sing 33 n n N15 HN15 4BM sing 34 n n C18 H18 4BM sing 35 n n C18 H18A 4BM sing 36 n n C19 H19 4BM sing 37 n n C20 H20 4BM sing 38 n n C20 H20A 4BM sing 39 n n O21 HO21 4BM sing 40 n n O22 HO22 4BM sing 41 n n # _atom_sites.entry_id 7JV0 _atom_sites.fract_transf_matrix[1][1] 0.007264 _atom_sites.fract_transf_matrix[1][2] 0.004194 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008388 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ANP A 1 901 901 ANP ANP . D 4 MG A 1 902 1001 MG MG . E 3 ANP C 1 401 401 ANP ANP . F 5 4BM C 1 402 501 4BM ZPD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 4BM . . . F 5 -15.387 36.998 8.13 1 188.43 ? C01 4BM 402 C 1 HETATM 2 C C02 4BM . . . F 5 -15.526 36.995 9.539 1 190.11 ? C02 4BM 402 C 1 HETATM 3 C C03 4BM . . . F 5 -15.755 35.816 10.243 1 191.9 ? C03 4BM 402 C 1 HETATM 4 C C04 4BM . . . F 5 -15.839 34.638 9.571 1 193.06 ? C04 4BM 402 C 1 HETATM 5 C C05 4BM . . . F 5 -15.702 34.621 8.167 1 195.16 ? C05 4BM 402 C 1 HETATM 6 C C06 4BM . . . F 5 -15.474 35.803 7.462 1 194.85 ? C06 4BM 402 C 1 HETATM 7 N N07 4BM . . . F 5 -15.127 38.283 7.37 1 180.61 ? N07 4BM 402 C 1 HETATM 8 C C08 4BM . . . F 5 -15.515 39.624 7.863 1 173.21 ? C08 4BM 402 C 1 HETATM 9 C C09 4BM . . . F 5 -16.368 40.391 7.11 1 171.5 ? C09 4BM 402 C 1 HETATM 10 C C10 4BM . . . F 5 -16.749 41.645 7.534 1 170.73 ? C10 4BM 402 C 1 HETATM 11 C C11 4BM . . . F 5 -16.274 42.14 8.73 1 175.62 ? C11 4BM 402 C 1 HETATM 12 C C12 4BM . . . F 5 -15.41 41.365 9.498 1 178.02 ? C12 4BM 402 C 1 HETATM 13 C C13 4BM . . . F 5 -15.034 40.138 9.072 1 176.31 ? C13 4BM 402 C 1 HETATM 14 C C14 4BM . . . F 5 -16.893 39.849 5.757 1 179.47 ? C14 4BM 402 C 1 HETATM 15 N N15 4BM . . . F 5 -17.519 40.754 4.845 1 182.42 ? N15 4BM 402 C 1 HETATM 16 O O16 4BM . . . F 5 -16.748 38.712 5.478 1 184.43 ? O16 4BM 402 C 1 HETATM 17 O O17 4BM . . . F 5 -18.007 40.314 3.571 1 191.9 ? O17 4BM 402 C 1 HETATM 18 C C18 4BM . . . F 5 -18.048 41.406 2.732 1 197.18 ? C18 4BM 402 C 1 HETATM 19 C C19 4BM . . . F 5 -17.069 41.185 1.579 1 199.91 ? C19 4BM 402 C 1 HETATM 20 C C20 4BM . . . F 5 -17.164 42.368 0.56 1 195.95 ? C20 4BM 402 C 1 HETATM 21 O O21 4BM . . . F 5 -15.777 41.116 2.095 1 206.63 ? O21 4BM 402 C 1 HETATM 22 O O22 4BM . . . F 5 -16.547 41.965 -0.693 1 189.03 ? O22 4BM 402 C 1 HETATM 23 I I23 4BM . . . F 5 -16.177 32.852 10.656 1 226.77 ? I23 4BM 402 C 1 HETATM 24 F F24 4BM . . . F 5 -15.344 35.768 6.102 1 193.47 ? F24 4BM 402 C 1 HETATM 25 F F25 4BM . . . F 5 -14.195 39.429 9.835 1 180.61 ? F25 4BM 402 C 1 HETATM 26 F F26 4BM . . . F 5 -14.929 41.845 10.686 1 179.19 ? F26 4BM 402 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 26 #