data_7JV5 # _model_server_result.job_id zhkV4ljqInNsF9EFB8JNrg _model_server_result.datetime_utc '2024-10-11 02:21:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jv5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 7JV5 # _exptl.entry_id 7JV5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JV5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JV5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N ? 7 J N N ? 7 K N N ? 7 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 144 R CYS 96 1_555 A SG CYS 234 R CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 346 R CYS 298 1_555 A SG CYS 355 R CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 E SG CYS 23 N CYS 22 1_555 E SG CYS 97 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 E SG CYS 100 N CYS 99 1_555 E SG CYS 108 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7JV5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 SK0 R 1 501 500 SK0 SK0 . G 7 CLR R 1 502 609 CLR CLR . H 7 CLR R 1 503 610 CLR CLR . I 7 CLR R 1 504 611 CLR CLR . J 7 CLR R 1 505 612 CLR CLR . K 7 CLR R 1 506 613 CLR CLR . L 7 CLR R 1 507 614 CLR CLR . M 8 PLM R 1 508 615 PLM PLM . N 8 PLM R 1 509 616 PLM PLM . O 8 PLM R 1 510 617 PLM PLM . P 8 PLM R 1 511 618 PLM PLM . Q 8 PLM R 1 512 619 PLM PLM . R 8 PLM R 1 513 620 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . G 7 74.954 121.049 76.906 1 158.92 ? C1 CLR 502 R 1 HETATM 2 C C2 CLR . . . G 7 74.937 121.319 75.399 1 86.11 ? C2 CLR 502 R 1 HETATM 3 C C3 CLR . . . G 7 75.668 122.627 75.114 1 124.46 ? C3 CLR 502 R 1 HETATM 4 C C4 CLR . . . G 7 77.147 122.425 75.446 1 108.22 ? C4 CLR 502 R 1 HETATM 5 C C5 CLR . . . G 7 77.271 121.999 76.899 1 212.35 ? C5 CLR 502 R 1 HETATM 6 C C6 CLR . . . G 7 78.148 122.617 77.637 1 216.87 ? C6 CLR 502 R 1 HETATM 7 C C7 CLR . . . G 7 78.392 122.314 79.089 1 183.75 ? C7 CLR 502 R 1 HETATM 8 C C8 CLR . . . G 7 77.824 120.943 79.481 1 177.44 ? C8 CLR 502 R 1 HETATM 9 C C9 CLR . . . G 7 76.39 120.836 78.939 1 128.24 ? C9 CLR 502 R 1 HETATM 10 C C10 CLR . . . G 7 76.393 120.898 77.417 1 168.52 ? C10 CLR 502 R 1 HETATM 11 C C11 CLR . . . G 7 75.67 119.585 79.449 1 104.1 ? C11 CLR 502 R 1 HETATM 12 C C12 CLR . . . G 7 75.743 119.46 80.979 1 60.81 ? C12 CLR 502 R 1 HETATM 13 C C13 CLR . . . G 7 77.192 119.512 81.484 1 98.69 ? C13 CLR 502 R 1 HETATM 14 C C14 CLR . . . G 7 77.789 120.871 81.004 1 133.45 ? C14 CLR 502 R 1 HETATM 15 C C15 CLR . . . G 7 79.148 120.902 81.717 1 98.21 ? C15 CLR 502 R 1 HETATM 16 C C16 CLR . . . G 7 78.795 120.349 83.125 1 69.82 ? C16 CLR 502 R 1 HETATM 17 C C17 CLR . . . G 7 77.44 119.587 83.002 1 107.62 ? C17 CLR 502 R 1 HETATM 18 C C18 CLR . . . G 7 78.016 118.366 80.882 1 127.89 ? C18 CLR 502 R 1 HETATM 19 C C19 CLR . . . G 7 76.966 119.582 76.876 1 138.13 ? C19 CLR 502 R 1 HETATM 20 C C20 CLR . . . G 7 77.44 118.211 83.719 1 91.51 ? C20 CLR 502 R 1 HETATM 21 C C21 CLR . . . G 7 76.034 117.909 84.258 1 88.77 ? C21 CLR 502 R 1 HETATM 22 C C22 CLR . . . G 7 78.434 118.149 84.893 1 73.87 ? C22 CLR 502 R 1 HETATM 23 C C23 CLR . . . G 7 78.3 116.838 85.674 1 68.63 ? C23 CLR 502 R 1 HETATM 24 C C24 CLR . . . G 7 79.079 116.936 86.986 1 85.39 ? C24 CLR 502 R 1 HETATM 25 C C25 CLR . . . G 7 78.692 115.762 87.888 1 95.51 ? C25 CLR 502 R 1 HETATM 26 C C26 CLR . . . G 7 79.341 115.94 89.26 1 125.46 ? C26 CLR 502 R 1 HETATM 27 C C27 CLR . . . G 7 79.156 114.445 87.263 1 154.6 ? C27 CLR 502 R 1 HETATM 28 O O1 CLR . . . G 7 75.528 122.964 73.732 1 168.45 ? O1 CLR 502 R 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #