data_7JV5
#
_model_server_result.job_id            JAVBkSY9XVh2vQkhLIIWfQ 
_model_server_result.datetime_utc      '2024-11-22 14:24:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jv5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":508}' 
#
_entry.id    7JV5 
#
_exptl.entry_id    7JV5 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7JV5 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7JV5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 8 M N N 
? 8 N N N 
? 8 O N N 
? 8 P N N 
? 8 Q N N 
? 8 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 144 R CYS 96 1_555 A SG CYS 234 R CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 346 R CYS 298 1_555 A SG CYS 355 R CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 E SG CYS 23 N CYS 22 1_555 E SG CYS 97 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 E SG CYS 100 N CYS 99 1_555 E SG CYS 108 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 335 n n 
C1 O2 PLM doub 336 n n 
C1 C2 PLM sing 337 n n 
O1 H PLM sing 338 n n 
C2 C3 PLM sing 339 n n 
C2 H21 PLM sing 340 n n 
C2 H22 PLM sing 341 n n 
C3 C4 PLM sing 342 n n 
C3 H31 PLM sing 343 n n 
C3 H32 PLM sing 344 n n 
C4 C5 PLM sing 345 n n 
C4 H41 PLM sing 346 n n 
C4 H42 PLM sing 347 n n 
C5 C6 PLM sing 348 n n 
C5 H51 PLM sing 349 n n 
C5 H52 PLM sing 350 n n 
C6 C7 PLM sing 351 n n 
C6 H61 PLM sing 352 n n 
C6 H62 PLM sing 353 n n 
C7 C8 PLM sing 354 n n 
C7 H71 PLM sing 355 n n 
C7 H72 PLM sing 356 n n 
C8 C9 PLM sing 357 n n 
C8 H81 PLM sing 358 n n 
C8 H82 PLM sing 359 n n 
C9 CA PLM sing 360 n n 
C9 H91 PLM sing 361 n n 
C9 H92 PLM sing 362 n n 
CA CB PLM sing 363 n n 
CA HA1 PLM sing 364 n n 
CA HA2 PLM sing 365 n n 
CB CC PLM sing 366 n n 
CB HB1 PLM sing 367 n n 
CB HB2 PLM sing 368 n n 
CC CD PLM sing 369 n n 
CC HC1 PLM sing 370 n n 
CC HC2 PLM sing 371 n n 
CD CE PLM sing 372 n n 
CD HD1 PLM sing 373 n n 
CD HD2 PLM sing 374 n n 
CE CF PLM sing 375 n n 
CE HE1 PLM sing 376 n n 
CE HE2 PLM sing 377 n n 
CF CG PLM sing 378 n n 
CF HF1 PLM sing 379 n n 
CF HF2 PLM sing 380 n n 
CG HG1 PLM sing 381 n n 
CG HG2 PLM sing 382 n n 
CG HG3 PLM sing 383 n n 
#
_atom_sites.entry_id                     7JV5 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 SK0 R 1 501 500 SK0 SK0 . 
G 7 CLR R 1 502 609 CLR CLR . 
H 7 CLR R 1 503 610 CLR CLR . 
I 7 CLR R 1 504 611 CLR CLR . 
J 7 CLR R 1 505 612 CLR CLR . 
K 7 CLR R 1 506 613 CLR CLR . 
L 7 CLR R 1 507 614 CLR CLR . 
M 8 PLM R 1 508 615 PLM PLM . 
N 8 PLM R 1 509 616 PLM PLM . 
O 8 PLM R 1 510 617 PLM PLM . 
P 8 PLM R 1 511 618 PLM PLM . 
Q 8 PLM R 1 512 619 PLM PLM . 
R 8 PLM R 1 513 620 PLM PLM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . M 8 60.62 116.341 76.065 1 72.55 ? C1 PLM 508 R 1 
HETATM 2 O O1 PLM . . . M 8 59.519 116.752 76.517 1 65.81 ? O1 PLM 508 R 1 
HETATM 3 O O2 PLM . . . M 8 60.977 116.65 74.898 1 78.22 ? O2 PLM 508 R 1 
HETATM 4 C C2 PLM . . . M 8 61.525 115.47 76.933 1 59.09 ? C2 PLM 508 R 1 
HETATM 5 C C3 PLM . . . M 8 62.853 116.152 77.255 1 59.71 ? C3 PLM 508 R 1 
HETATM 6 C C4 PLM . . . M 8 63.777 115.252 78.073 1 68.48 ? C4 PLM 508 R 1 
HETATM 7 C C5 PLM . . . M 8 65.09 115.938 78.442 1 88.9 ? C5 PLM 508 R 1 
HETATM 8 C C6 PLM . . . M 8 65.921 115.087 79.399 1 101.7 ? C6 PLM 508 R 1 
HETATM 9 C C7 PLM . . . M 8 67.205 115.776 79.855 1 78.02 ? C7 PLM 508 R 1 
HETATM 10 C C8 PLM . . . M 8 67.931 114.945 80.911 1 105.75 ? C8 PLM 508 R 1 
HETATM 11 C C9 PLM . . . M 8 69.207 115.601 81.433 1 60.1 ? C9 PLM 508 R 1 
HETATM 12 C CA PLM . . . M 8 69.735 114.862 82.66 1 50.44 ? CA PLM 508 R 1 
HETATM 13 C CB PLM . . . M 8 71.094 115.364 83.142 1 30.89 ? CB PLM 508 R 1 
HETATM 14 C CC PLM . . . M 8 71.544 114.608 84.39 1 47.11 ? CC PLM 508 R 1 
HETATM 15 C CD PLM . . . M 8 72.946 114.988 84.857 1 48.85 ? CD PLM 508 R 1 
HETATM 16 C CE PLM . . . M 8 73.342 114.221 86.117 1 42.18 ? CE PLM 508 R 1 
HETATM 17 C CF PLM . . . M 8 74.742 114.576 86.61 1 85.95 ? CF PLM 508 R 1 
HETATM 18 C CG PLM . . . M 8 75.147 113.751 87.83 1 51.26 ? CG PLM 508 R 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           18 
#