data_7JVQ # _model_server_result.job_id I2Yu0M5wRJ8MgYDma06WtQ _model_server_result.datetime_utc '2024-11-22 12:52:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jvq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 7JVQ # _exptl.entry_id 7JVQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 267.322 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6aR)-6-methyl-5,6,6a,7-tetrahydro-4H-dibenzo[de,g]quinoline-10,11-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7JVQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 144 R CYS 96 1_555 A SG CYS 234 R CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 346 R CYS 298 1_555 A SG CYS 355 R CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 E SG CYS 23 N CYS 22 1_555 E SG CYS 97 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 E SG CYS 100 N CYS 99 1_555 E SG CYS 108 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'C17 H17 N O2' _chem_comp.formula_weight 267.322 _chem_comp.id OR9 _chem_comp.mon_nstd_flag . _chem_comp.name (6aR)-6-methyl-5,6,6a,7-tetrahydro-4H-dibenzo[de,g]quinoline-10,11-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C15 OR9 doub 312 n y C11 C04 OR9 sing 313 n y C15 C12 OR9 sing 314 n y C06 C04 OR9 sing 315 n n C06 C05 OR9 sing 316 n n C04 C02 OR9 doub 317 n y C05 N01 OR9 sing 318 n n C12 C07 OR9 doub 319 n y C02 C07 OR9 sing 320 n y C02 C01 OR9 sing 321 n n C07 C09 OR9 sing 322 n n N01 C01 OR9 sing 323 n n N01 C10 OR9 sing 324 n n C01 C03 OR9 sing 325 n n O01 C14 OR9 sing 326 n n C09 C14 OR9 doub 327 n y C09 C08 OR9 sing 328 n y C03 C08 OR9 sing 329 n n C14 C16 OR9 sing 330 n y C08 C13 OR9 doub 331 n y C16 O02 OR9 sing 332 n n C16 C17 OR9 doub 333 n y C13 C17 OR9 sing 334 n y C01 H1 OR9 sing 335 n n C03 H2 OR9 sing 336 n n C03 H3 OR9 sing 337 n n C05 H4 OR9 sing 338 n n C05 H5 OR9 sing 339 n n C06 H6 OR9 sing 340 n n C06 H7 OR9 sing 341 n n C10 H8 OR9 sing 342 n n C10 H9 OR9 sing 343 n n C10 H10 OR9 sing 344 n n C11 H11 OR9 sing 345 n n C12 H12 OR9 sing 346 n n C13 H13 OR9 sing 347 n n C15 H14 OR9 sing 348 n n C17 H15 OR9 sing 349 n n O01 H17 OR9 sing 350 n n O02 H18 OR9 sing 351 n n # _atom_sites.entry_id 7JVQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 OR9 R 1 501 500 OR9 OR9 . G 7 CLR R 1 502 609 CLR CLR . H 7 CLR R 1 503 610 CLR CLR . I 7 CLR R 1 504 611 CLR CLR . J 7 CLR R 1 505 612 CLR CLR . K 7 CLR R 1 506 614 CLR CLR . L 8 PLM R 1 507 617 PLM PLM . M 8 PLM R 1 508 618 PLM PLM . N 8 PLM R 1 509 620 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 OR9 . . . F 6 92.864 107.125 78.062 1 27.55 ? C01 OR9 501 R 1 HETATM 2 C C02 OR9 . . . F 6 91.825 107.506 77.006 1 26.49 ? C02 OR9 501 R 1 HETATM 3 C C03 OR9 . . . F 6 92.071 106.564 79.259 1 31.56 ? C03 OR9 501 R 1 HETATM 4 C C04 OR9 . . . F 6 91.997 107.147 75.657 1 29.87 ? C04 OR9 501 R 1 HETATM 5 C C05 OR9 . . . F 6 94.356 106.583 76.226 1 31.71 ? C05 OR9 501 R 1 HETATM 6 C C06 OR9 . . . F 6 93.218 106.389 75.228 1 35.8 ? C06 OR9 501 R 1 HETATM 7 C C07 OR9 . . . F 6 90.685 108.225 77.441 1 28.09 ? C07 OR9 501 R 1 HETATM 8 C C08 OR9 . . . F 6 91.277 107.725 79.802 1 27.85 ? C08 OR9 501 R 1 HETATM 9 C C09 OR9 . . . F 6 90.583 108.562 78.894 1 27.88 ? C09 OR9 501 R 1 HETATM 10 C C10 OR9 . . . F 6 95.121 106.419 78.463 1 39.65 ? C10 OR9 501 R 1 HETATM 11 C C11 OR9 . . . F 6 91.033 107.501 74.709 1 35.72 ? C11 OR9 501 R 1 HETATM 12 C C12 OR9 . . . F 6 89.737 108.551 76.455 1 29.73 ? C12 OR9 501 R 1 HETATM 13 C C13 OR9 . . . F 6 91.265 107.955 81.184 1 34.7 ? C13 OR9 501 R 1 HETATM 14 C C14 OR9 . . . F 6 89.871 109.647 79.457 1 41.76 ? C14 OR9 501 R 1 HETATM 15 C C15 OR9 . . . F 6 89.907 108.204 75.112 1 35.6 ? C15 OR9 501 R 1 HETATM 16 C C16 OR9 . . . F 6 89.86 109.863 80.838 1 52.25 ? C16 OR9 501 R 1 HETATM 17 C C17 OR9 . . . F 6 90.551 109.025 81.702 1 47.83 ? C17 OR9 501 R 1 HETATM 18 N N01 OR9 . . . F 6 93.952 106.23 77.598 1 31.77 ? N01 OR9 501 R 1 HETATM 19 O O01 OR9 . . . F 6 89.141 110.567 78.754 1 58.76 ? O01 OR9 501 R 1 HETATM 20 O O02 OR9 . . . F 6 89.169 110.907 81.369 1 55.56 ? O02 OR9 501 R 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #