data_7JW9 # _model_server_result.job_id cqoygLu5X-W72xH0UiAwMg _model_server_result.datetime_utc '2024-11-01 17:33:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jw9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":403}' # _entry.id 7JW9 # _exptl.entry_id 7JW9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7JW9 _cell.length_a 92.47 _cell.length_b 92.47 _cell.length_c 320.54 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JW9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall 'P 61' _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 296 A ALA 273 1_555 G NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc2 A OD1 ASP 299 A ASP 276 1_555 G NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc3 G NA NA . A NA 403 1_455 C OG SER 147 C SER 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc4 G NA NA . A NA 403 1_555 P O HOH . C HOH 528 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 3.042 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7JW9 _atom_sites.fract_transf_matrix[1][1] 0.010814 _atom_sites.fract_transf_matrix[1][2] 0.006244 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012487 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 03S A 1 401 401 03S 03S . F 3 FMN A 1 402 501 FMN FMN . G 4 NA A 1 403 1 NA NA . H 2 03S B 1 401 401 03S 03S . I 3 FMN B 1 402 501 FMN FMN . J 2 03S C 1 401 401 03S 03S . K 3 FMN C 1 402 501 FMN FMN . L 2 03S D 1 401 401 03S 03S . M 3 FMN D 1 402 501 FMN FMN . N 5 HOH A 1 501 5 HOH HOH . N 5 HOH A 2 502 118 HOH HOH . N 5 HOH A 3 503 101 HOH HOH . N 5 HOH A 4 504 13 HOH HOH . N 5 HOH A 5 505 1 HOH HOH . N 5 HOH A 6 506 38 HOH HOH . N 5 HOH A 7 507 114 HOH HOH . N 5 HOH A 8 508 47 HOH HOH . N 5 HOH A 9 509 138 HOH HOH . N 5 HOH A 10 510 66 HOH HOH . N 5 HOH A 11 511 15 HOH HOH . N 5 HOH A 12 512 46 HOH HOH . N 5 HOH A 13 513 23 HOH HOH . N 5 HOH A 14 514 21 HOH HOH . N 5 HOH A 15 515 87 HOH HOH . N 5 HOH A 16 516 104 HOH HOH . N 5 HOH A 17 517 12 HOH HOH . N 5 HOH A 18 518 83 HOH HOH . N 5 HOH A 19 519 37 HOH HOH . N 5 HOH A 20 520 14 HOH HOH . N 5 HOH A 21 521 86 HOH HOH . N 5 HOH A 22 522 25 HOH HOH . N 5 HOH A 23 523 130 HOH HOH . N 5 HOH A 24 524 108 HOH HOH . N 5 HOH A 25 525 96 HOH HOH . N 5 HOH A 26 526 94 HOH HOH . N 5 HOH A 27 527 79 HOH HOH . N 5 HOH A 28 528 107 HOH HOH . N 5 HOH A 29 529 43 HOH HOH . N 5 HOH A 30 530 120 HOH HOH . N 5 HOH A 31 531 65 HOH HOH . N 5 HOH A 32 532 88 HOH HOH . N 5 HOH A 33 533 103 HOH HOH . N 5 HOH A 34 534 124 HOH HOH . O 5 HOH B 1 501 29 HOH HOH . O 5 HOH B 2 502 97 HOH HOH . O 5 HOH B 3 503 16 HOH HOH . O 5 HOH B 4 504 8 HOH HOH . O 5 HOH B 5 505 19 HOH HOH . O 5 HOH B 6 506 77 HOH HOH . O 5 HOH B 7 507 57 HOH HOH . O 5 HOH B 8 508 51 HOH HOH . O 5 HOH B 9 509 39 HOH HOH . O 5 HOH B 10 510 53 HOH HOH . O 5 HOH B 11 511 58 HOH HOH . O 5 HOH B 12 512 133 HOH HOH . O 5 HOH B 13 513 18 HOH HOH . O 5 HOH B 14 514 50 HOH HOH . O 5 HOH B 15 515 98 HOH HOH . O 5 HOH B 16 516 100 HOH HOH . O 5 HOH B 17 517 35 HOH HOH . O 5 HOH B 18 518 17 HOH HOH . O 5 HOH B 19 519 105 HOH HOH . O 5 HOH B 20 520 64 HOH HOH . O 5 HOH B 21 521 137 HOH HOH . O 5 HOH B 22 522 126 HOH HOH . O 5 HOH B 23 523 9 HOH HOH . O 5 HOH B 24 524 24 HOH HOH . O 5 HOH B 25 525 113 HOH HOH . O 5 HOH B 26 526 44 HOH HOH . O 5 HOH B 27 527 136 HOH HOH . P 5 HOH C 1 501 3 HOH HOH . P 5 HOH C 2 502 40 HOH HOH . P 5 HOH C 3 503 106 HOH HOH . P 5 HOH C 4 504 110 HOH HOH . P 5 HOH C 5 505 75 HOH HOH . P 5 HOH C 6 506 90 HOH HOH . P 5 HOH C 7 507 49 HOH HOH . P 5 HOH C 8 508 128 HOH HOH . P 5 HOH C 9 509 42 HOH HOH . P 5 HOH C 10 510 4 HOH HOH . P 5 HOH C 11 511 84 HOH HOH . P 5 HOH C 12 512 7 HOH HOH . P 5 HOH C 13 513 56 HOH HOH . P 5 HOH C 14 514 76 HOH HOH . P 5 HOH C 15 515 68 HOH HOH . P 5 HOH C 16 516 85 HOH HOH . P 5 HOH C 17 517 81 HOH HOH . P 5 HOH C 18 518 26 HOH HOH . P 5 HOH C 19 519 74 HOH HOH . P 5 HOH C 20 520 63 HOH HOH . P 5 HOH C 21 521 129 HOH HOH . P 5 HOH C 22 522 123 HOH HOH . P 5 HOH C 23 523 116 HOH HOH . P 5 HOH C 24 524 99 HOH HOH . P 5 HOH C 25 525 60 HOH HOH . P 5 HOH C 26 526 48 HOH HOH . P 5 HOH C 27 527 89 HOH HOH . P 5 HOH C 28 528 62 HOH HOH . P 5 HOH C 29 529 33 HOH HOH . P 5 HOH C 30 530 54 HOH HOH . P 5 HOH C 31 531 20 HOH HOH . P 5 HOH C 32 532 109 HOH HOH . P 5 HOH C 33 533 34 HOH HOH . P 5 HOH C 34 534 95 HOH HOH . P 5 HOH C 35 535 70 HOH HOH . P 5 HOH C 36 536 69 HOH HOH . P 5 HOH C 37 537 134 HOH HOH . P 5 HOH C 38 538 119 HOH HOH . P 5 HOH C 39 539 132 HOH HOH . Q 5 HOH D 1 501 92 HOH HOH . Q 5 HOH D 2 502 127 HOH HOH . Q 5 HOH D 3 503 131 HOH HOH . Q 5 HOH D 4 504 2 HOH HOH . Q 5 HOH D 5 505 10 HOH HOH . Q 5 HOH D 6 506 6 HOH HOH . Q 5 HOH D 7 507 52 HOH HOH . Q 5 HOH D 8 508 82 HOH HOH . Q 5 HOH D 9 509 45 HOH HOH . Q 5 HOH D 10 510 31 HOH HOH . Q 5 HOH D 11 511 30 HOH HOH . Q 5 HOH D 12 512 22 HOH HOH . Q 5 HOH D 13 513 122 HOH HOH . Q 5 HOH D 14 514 111 HOH HOH . Q 5 HOH D 15 515 115 HOH HOH . Q 5 HOH D 16 516 72 HOH HOH . Q 5 HOH D 17 517 80 HOH HOH . Q 5 HOH D 18 518 11 HOH HOH . Q 5 HOH D 19 519 28 HOH HOH . Q 5 HOH D 20 520 27 HOH HOH . Q 5 HOH D 21 521 135 HOH HOH . Q 5 HOH D 22 522 32 HOH HOH . Q 5 HOH D 23 523 61 HOH HOH . Q 5 HOH D 24 524 67 HOH HOH . Q 5 HOH D 25 525 41 HOH HOH . Q 5 HOH D 26 526 59 HOH HOH . Q 5 HOH D 27 527 73 HOH HOH . Q 5 HOH D 28 528 36 HOH HOH . Q 5 HOH D 29 529 78 HOH HOH . Q 5 HOH D 30 530 55 HOH HOH . Q 5 HOH D 31 531 117 HOH HOH . Q 5 HOH D 32 532 91 HOH HOH . Q 5 HOH D 33 533 112 HOH HOH . Q 5 HOH D 34 534 71 HOH HOH . Q 5 HOH D 35 535 121 HOH HOH . Q 5 HOH D 36 536 93 HOH HOH . Q 5 HOH D 37 537 125 HOH HOH . Q 5 HOH D 38 538 102 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 15.685 _atom_site.Cartn_y 36.475 _atom_site.Cartn_z 46.186 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 68.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #