data_7JX1 # _model_server_result.job_id Dirr1sotNRi-dB8QAfwwZg _model_server_result.datetime_utc '2024-11-24 05:03:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jx1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 7JX1 # _exptl.entry_id 7JX1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7JX1 _cell.length_a 125.98 _cell.length_b 125.98 _cell.length_c 67.34 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JX1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C CXM 1 A CXM 1 1_555 A N LYS 2 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale2 B C CXM 1 B CXM 1 1_555 B N LYS 2 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B SG CYS 146 B CYS 146 1_555 E C6 VLD . B VLD 301 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.977 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 282 n n P O2 PO4 sing 283 n n P O3 PO4 sing 284 n n P O4 PO4 sing 285 n n # _atom_sites.entry_id 7JX1 _atom_sites.fract_transf_matrix[1][1] 0.007938 _atom_sites.fract_transf_matrix[1][2] 0.004583 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009166 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01485 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VLA A 1 301 266 VLA C2H . D 3 TMP A 1 302 265 TMP TMP . E 4 VLD B 1 301 266 VLD IN2 . F 5 PO4 B 1 302 247 PO4 PO4 . G 6 HOH A 1 401 192 HOH HOH . G 6 HOH A 2 402 213 HOH HOH . G 6 HOH A 3 403 203 HOH HOH . G 6 HOH A 4 404 15 HOH HOH . G 6 HOH A 5 405 117 HOH HOH . G 6 HOH A 6 406 249 HOH HOH . G 6 HOH A 7 407 20 HOH HOH . G 6 HOH A 8 408 236 HOH HOH . G 6 HOH A 9 409 225 HOH HOH . G 6 HOH A 10 410 97 HOH HOH . G 6 HOH A 11 411 245 HOH HOH . G 6 HOH A 12 412 62 HOH HOH . G 6 HOH A 13 413 49 HOH HOH . G 6 HOH A 14 414 12 HOH HOH . G 6 HOH A 15 415 42 HOH HOH . G 6 HOH A 16 416 160 HOH HOH . G 6 HOH A 17 417 61 HOH HOH . G 6 HOH A 18 418 15 HOH HOH . G 6 HOH A 19 419 243 HOH HOH . G 6 HOH A 20 420 79 HOH HOH . G 6 HOH A 21 421 232 HOH HOH . G 6 HOH A 22 422 71 HOH HOH . G 6 HOH A 23 423 214 HOH HOH . G 6 HOH A 24 424 126 HOH HOH . G 6 HOH A 25 425 179 HOH HOH . G 6 HOH A 26 426 63 HOH HOH . G 6 HOH A 27 427 23 HOH HOH . G 6 HOH A 28 428 115 HOH HOH . G 6 HOH A 29 429 11 HOH HOH . G 6 HOH A 30 430 127 HOH HOH . G 6 HOH A 31 431 88 HOH HOH . G 6 HOH A 32 432 147 HOH HOH . G 6 HOH A 33 433 122 HOH HOH . G 6 HOH A 34 434 4 HOH HOH . G 6 HOH A 35 435 178 HOH HOH . G 6 HOH A 36 436 208 HOH HOH . G 6 HOH A 37 437 69 HOH HOH . G 6 HOH A 38 438 124 HOH HOH . G 6 HOH A 39 439 36 HOH HOH . G 6 HOH A 40 440 8 HOH HOH . G 6 HOH A 41 441 14 HOH HOH . G 6 HOH A 42 442 31 HOH HOH . G 6 HOH A 43 443 86 HOH HOH . G 6 HOH A 44 444 143 HOH HOH . G 6 HOH A 45 445 177 HOH HOH . G 6 HOH A 46 446 9 HOH HOH . G 6 HOH A 47 447 18 HOH HOH . G 6 HOH A 48 448 144 HOH HOH . G 6 HOH A 49 449 227 HOH HOH . G 6 HOH A 50 450 102 HOH HOH . G 6 HOH A 51 451 21 HOH HOH . G 6 HOH A 52 452 194 HOH HOH . G 6 HOH A 53 453 91 HOH HOH . G 6 HOH A 54 454 169 HOH HOH . G 6 HOH A 55 455 182 HOH HOH . G 6 HOH A 56 456 163 HOH HOH . G 6 HOH A 57 457 191 HOH HOH . G 6 HOH A 58 458 51 HOH HOH . G 6 HOH A 59 459 241 HOH HOH . G 6 HOH A 60 460 250 HOH HOH . G 6 HOH A 61 461 1 HOH HOH . G 6 HOH A 62 462 56 HOH HOH . G 6 HOH A 63 463 106 HOH HOH . G 6 HOH A 64 464 29 HOH HOH . G 6 HOH A 65 465 206 HOH HOH . G 6 HOH A 66 466 75 HOH HOH . G 6 HOH A 67 467 96 HOH HOH . G 6 HOH A 68 468 47 HOH HOH . G 6 HOH A 69 469 25 HOH HOH . G 6 HOH A 70 470 39 HOH HOH . G 6 HOH A 71 471 58 HOH HOH . G 6 HOH A 72 472 139 HOH HOH . G 6 HOH A 73 473 12 HOH HOH . G 6 HOH A 74 474 113 HOH HOH . G 6 HOH A 75 475 13 HOH HOH . G 6 HOH A 76 476 89 HOH HOH . G 6 HOH A 77 477 5 HOH HOH . G 6 HOH A 78 478 186 HOH HOH . G 6 HOH A 79 479 38 HOH HOH . G 6 HOH A 80 480 28 HOH HOH . G 6 HOH A 81 481 155 HOH HOH . G 6 HOH A 82 482 93 HOH HOH . G 6 HOH A 83 483 107 HOH HOH . G 6 HOH A 84 484 129 HOH HOH . G 6 HOH A 85 485 33 HOH HOH . G 6 HOH A 86 486 90 HOH HOH . G 6 HOH A 87 487 161 HOH HOH . G 6 HOH A 88 488 172 HOH HOH . G 6 HOH A 89 489 24 HOH HOH . G 6 HOH A 90 490 74 HOH HOH . G 6 HOH A 91 491 50 HOH HOH . G 6 HOH A 92 492 220 HOH HOH . G 6 HOH A 93 493 70 HOH HOH . G 6 HOH A 94 494 87 HOH HOH . G 6 HOH A 95 495 132 HOH HOH . G 6 HOH A 96 496 57 HOH HOH . G 6 HOH A 97 497 125 HOH HOH . G 6 HOH A 98 498 152 HOH HOH . G 6 HOH A 99 499 2 HOH HOH . G 6 HOH A 100 500 95 HOH HOH . G 6 HOH A 101 501 114 HOH HOH . G 6 HOH A 102 502 181 HOH HOH . G 6 HOH A 103 503 118 HOH HOH . G 6 HOH A 104 504 230 HOH HOH . G 6 HOH A 105 505 64 HOH HOH . G 6 HOH A 106 506 17 HOH HOH . G 6 HOH A 107 507 215 HOH HOH . G 6 HOH A 108 508 52 HOH HOH . G 6 HOH A 109 509 85 HOH HOH . G 6 HOH A 110 510 104 HOH HOH . G 6 HOH A 111 511 72 HOH HOH . G 6 HOH A 112 512 158 HOH HOH . G 6 HOH A 113 513 44 HOH HOH . G 6 HOH A 114 514 46 HOH HOH . G 6 HOH A 115 515 77 HOH HOH . G 6 HOH A 116 516 151 HOH HOH . G 6 HOH A 117 517 100 HOH HOH . G 6 HOH A 118 518 84 HOH HOH . G 6 HOH A 119 519 53 HOH HOH . G 6 HOH A 120 520 150 HOH HOH . G 6 HOH A 121 521 68 HOH HOH . G 6 HOH A 122 522 140 HOH HOH . G 6 HOH A 123 523 244 HOH HOH . G 6 HOH A 124 524 34 HOH HOH . G 6 HOH A 125 525 205 HOH HOH . G 6 HOH A 126 526 211 HOH HOH . G 6 HOH A 127 527 35 HOH HOH . G 6 HOH A 128 528 10 HOH HOH . G 6 HOH A 129 529 175 HOH HOH . G 6 HOH A 130 530 109 HOH HOH . G 6 HOH A 131 531 103 HOH HOH . G 6 HOH A 132 532 94 HOH HOH . G 6 HOH A 133 533 234 HOH HOH . G 6 HOH A 134 534 226 HOH HOH . G 6 HOH A 135 535 142 HOH HOH . G 6 HOH A 136 536 112 HOH HOH . G 6 HOH A 137 537 197 HOH HOH . G 6 HOH A 138 538 231 HOH HOH . G 6 HOH A 139 539 202 HOH HOH . G 6 HOH A 140 540 233 HOH HOH . G 6 HOH A 141 541 145 HOH HOH . G 6 HOH A 142 542 120 HOH HOH . G 6 HOH A 143 543 159 HOH HOH . G 6 HOH A 144 544 185 HOH HOH . G 6 HOH A 145 545 148 HOH HOH . G 6 HOH A 146 546 199 HOH HOH . G 6 HOH A 147 547 30 HOH HOH . G 6 HOH A 148 548 164 HOH HOH . G 6 HOH A 149 549 224 HOH HOH . G 6 HOH A 150 550 246 HOH HOH . G 6 HOH A 151 551 119 HOH HOH . G 6 HOH A 152 552 14 HOH HOH . G 6 HOH A 153 553 187 HOH HOH . G 6 HOH A 154 554 189 HOH HOH . G 6 HOH A 155 555 134 HOH HOH . G 6 HOH A 156 556 130 HOH HOH . G 6 HOH A 157 557 168 HOH HOH . G 6 HOH A 158 558 240 HOH HOH . G 6 HOH A 159 559 153 HOH HOH . G 6 HOH A 160 560 171 HOH HOH . G 6 HOH A 161 561 216 HOH HOH . G 6 HOH A 162 562 223 HOH HOH . G 6 HOH A 163 563 162 HOH HOH . G 6 HOH A 164 564 174 HOH HOH . G 6 HOH A 165 565 188 HOH HOH . G 6 HOH A 166 566 193 HOH HOH . G 6 HOH A 167 567 196 HOH HOH . G 6 HOH A 168 568 222 HOH HOH . G 6 HOH A 169 569 242 HOH HOH . H 6 HOH B 1 401 116 HOH HOH . H 6 HOH B 2 402 82 HOH HOH . H 6 HOH B 3 403 238 HOH HOH . H 6 HOH B 4 404 248 HOH HOH . H 6 HOH B 5 405 99 HOH HOH . H 6 HOH B 6 406 16 HOH HOH . H 6 HOH B 7 407 128 HOH HOH . H 6 HOH B 8 408 45 HOH HOH . H 6 HOH B 9 409 229 HOH HOH . H 6 HOH B 10 410 166 HOH HOH . H 6 HOH B 11 411 217 HOH HOH . H 6 HOH B 12 412 1 HOH HOH . H 6 HOH B 13 413 219 HOH HOH . H 6 HOH B 14 414 212 HOH HOH . H 6 HOH B 15 415 210 HOH HOH . H 6 HOH B 16 416 131 HOH HOH . H 6 HOH B 17 417 81 HOH HOH . H 6 HOH B 18 418 123 HOH HOH . H 6 HOH B 19 419 80 HOH HOH . H 6 HOH B 20 420 5 HOH HOH . H 6 HOH B 21 421 105 HOH HOH . H 6 HOH B 22 422 183 HOH HOH . H 6 HOH B 23 423 6 HOH HOH . H 6 HOH B 24 424 67 HOH HOH . H 6 HOH B 25 425 180 HOH HOH . H 6 HOH B 26 426 11 HOH HOH . H 6 HOH B 27 427 156 HOH HOH . H 6 HOH B 28 428 43 HOH HOH . H 6 HOH B 29 429 27 HOH HOH . H 6 HOH B 30 430 78 HOH HOH . H 6 HOH B 31 431 73 HOH HOH . H 6 HOH B 32 432 111 HOH HOH . H 6 HOH B 33 433 32 HOH HOH . H 6 HOH B 34 434 98 HOH HOH . H 6 HOH B 35 435 40 HOH HOH . H 6 HOH B 36 436 48 HOH HOH . H 6 HOH B 37 437 221 HOH HOH . H 6 HOH B 38 438 41 HOH HOH . H 6 HOH B 39 439 146 HOH HOH . H 6 HOH B 40 440 13 HOH HOH . H 6 HOH B 41 441 7 HOH HOH . H 6 HOH B 42 442 137 HOH HOH . H 6 HOH B 43 443 136 HOH HOH . H 6 HOH B 44 444 76 HOH HOH . H 6 HOH B 45 445 235 HOH HOH . H 6 HOH B 46 446 184 HOH HOH . H 6 HOH B 47 447 16 HOH HOH . H 6 HOH B 48 448 7 HOH HOH . H 6 HOH B 49 449 110 HOH HOH . H 6 HOH B 50 450 37 HOH HOH . H 6 HOH B 51 451 3 HOH HOH . H 6 HOH B 52 452 9 HOH HOH . H 6 HOH B 53 453 55 HOH HOH . H 6 HOH B 54 454 66 HOH HOH . H 6 HOH B 55 455 83 HOH HOH . H 6 HOH B 56 456 190 HOH HOH . H 6 HOH B 57 457 26 HOH HOH . H 6 HOH B 58 458 22 HOH HOH . H 6 HOH B 59 459 165 HOH HOH . H 6 HOH B 60 460 19 HOH HOH . H 6 HOH B 61 461 121 HOH HOH . H 6 HOH B 62 462 138 HOH HOH . H 6 HOH B 63 463 141 HOH HOH . H 6 HOH B 64 464 204 HOH HOH . H 6 HOH B 65 465 59 HOH HOH . H 6 HOH B 66 466 54 HOH HOH . H 6 HOH B 67 467 239 HOH HOH . H 6 HOH B 68 468 108 HOH HOH . H 6 HOH B 69 469 10 HOH HOH . H 6 HOH B 70 470 4 HOH HOH . H 6 HOH B 71 471 92 HOH HOH . H 6 HOH B 72 472 101 HOH HOH . H 6 HOH B 73 473 218 HOH HOH . H 6 HOH B 74 474 201 HOH HOH . H 6 HOH B 75 475 6 HOH HOH . H 6 HOH B 76 476 2 HOH HOH . H 6 HOH B 77 477 65 HOH HOH . H 6 HOH B 78 478 60 HOH HOH . H 6 HOH B 79 479 3 HOH HOH . H 6 HOH B 80 480 170 HOH HOH . H 6 HOH B 81 481 167 HOH HOH . H 6 HOH B 82 482 157 HOH HOH . H 6 HOH B 83 483 195 HOH HOH . H 6 HOH B 84 484 176 HOH HOH . H 6 HOH B 85 485 198 HOH HOH . H 6 HOH B 86 486 135 HOH HOH . H 6 HOH B 87 487 154 HOH HOH . H 6 HOH B 88 488 173 HOH HOH . H 6 HOH B 89 489 200 HOH HOH . H 6 HOH B 90 490 209 HOH HOH . H 6 HOH B 91 491 237 HOH HOH . H 6 HOH B 92 492 149 HOH HOH . H 6 HOH B 93 493 133 HOH HOH . H 6 HOH B 94 494 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . B . F 5 -14.453 24.469 -7.774 0.41 68.49 ? P PO4 302 B 1 HETATM 2 O O1 PO4 . B . F 5 -15.209 24.613 -9.082 0.41 63.9 ? O1 PO4 302 B 1 HETATM 3 O O2 PO4 . B . F 5 -13.298 25.442 -7.725 0.41 90.91 ? O2 PO4 302 B 1 HETATM 4 O O3 PO4 . B . F 5 -13.919 23.058 -7.706 0.41 75.52 ? O3 PO4 302 B 1 HETATM 5 O O4 PO4 . B . F 5 -15.361 24.72 -6.594 0.41 62.46 ? O4 PO4 302 B 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #