data_7JXI # _model_server_result.job_id 9dvhLVR4n5-QwPBvu_r7Ww _model_server_result.datetime_utc '2024-11-21 16:17:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jxi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1101}' # _entry.id 7JXI # _exptl.entry_id 7JXI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 417.441 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(3R,4R)-4-fluoro-1-{6-[(3-methoxy-1-methyl-1H-pyrazol-4-yl)amino]-9-methyl-9H-purin-2-yl}pyrrolidin-3-yl]propanamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.17 _cell.angle_gamma 90 _cell.entry_id 7JXI _cell.length_a 70.63 _cell.length_b 100.778 _cell.length_c 87.155 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JXI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,G 1 1 A,E 1 2 B,F 2 1 D,H 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_556 x,y,z+1 1 0 0 0 1 0 0 0 1 -16.883727 0 85.503999 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 106 D CYS 797 1_555 E C29 8BS . D 8BS 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale2 B SG CYS 106 A CYS 797 1_555 F C29 8BS . A 8BS 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.763 ? covale ? covale3 C SG CYS 106 C CYS 797 1_555 G C29 8BS . C 8BS 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale4 D SG CYS 106 B CYS 797 1_555 H C29 8BS . B 8BS 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? # _chem_comp.formula 'C18 H24 F N9 O2' _chem_comp.formula_weight 417.441 _chem_comp.id 8BS _chem_comp.mon_nstd_flag . _chem_comp.name N-[(3R,4R)-4-fluoro-1-{6-[(3-methoxy-1-methyl-1H-pyrazol-4-yl)amino]-9-methyl-9H-purin-2-yl}pyrrolidin-3-yl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 N12 8BS sing 1 n n C13 N12 8BS sing 2 n y C13 N14 8BS doub 3 n y N12 C10 8BS sing 4 n y N14 C9 8BS sing 5 n y C10 C9 8BS doub 6 n y C10 N11 8BS sing 7 n y C9 C8 8BS sing 8 n y C23 O22 8BS sing 9 n n O22 C21 8BS sing 10 n n N11 C6 8BS doub 11 n y C8 N16 8BS sing 12 n n C8 N7 8BS doub 13 n y N16 C17 8BS sing 14 n n C6 N7 8BS sing 15 n y C6 N4 8BS sing 16 n n F25 C2 8BS sing 17 n n C21 C17 8BS sing 18 n y C21 N20 8BS doub 19 n y C17 C18 8BS doub 20 n y C3 N4 8BS sing 21 n n C3 C2 8BS sing 22 n n N4 C5 8BS sing 23 n n N20 N19 8BS sing 24 n y C2 C1 8BS sing 25 n n C18 N19 8BS sing 26 n y C5 C1 8BS sing 27 n n N19 C24 8BS sing 28 n n C1 N26 8BS sing 29 n n N26 C27 8BS sing 30 n n C27 O30 8BS doub 31 n n C27 C28 8BS sing 32 n n C28 C29 8BS sing 33 n n C5 H1 8BS sing 34 n n C5 H2 8BS sing 35 n n C13 H3 8BS sing 36 n n C15 H4 8BS sing 37 n n C15 H5 8BS sing 38 n n C15 H6 8BS sing 39 n n C24 H7 8BS sing 40 n n C24 H8 8BS sing 41 n n C24 H9 8BS sing 42 n n C28 H10 8BS sing 43 n n C28 H11 8BS sing 44 n n C1 H12 8BS sing 45 n n C2 H13 8BS sing 46 n n C3 H14 8BS sing 47 n n C3 H15 8BS sing 48 n n N16 H16 8BS sing 49 n n C18 H17 8BS sing 50 n n C23 H18 8BS sing 51 n n C23 H19 8BS sing 52 n n C23 H20 8BS sing 53 n n N26 H21 8BS sing 54 n n C29 H22 8BS sing 55 n n C29 H23 8BS sing 56 n n C29 H24 8BS sing 57 n n # _atom_sites.entry_id 7JXI _atom_sites.fract_transf_matrix[1][1] 0.014158 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002797 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011696 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 8BS D 1 1101 1101 8BS PF7 . F 2 8BS A 1 1101 1101 8BS PF7 . G 2 8BS C 1 1101 1101 8BS PF7 . H 2 8BS B 1 1101 1101 8BS PF7 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 8BS . . . F 2 13.686 -30.212 50.592 1 50.02 ? C5 8BS 1101 A 1 HETATM 2 C C6 8BS . . . F 2 15.491 -30.216 52.553 1 51.57 ? C6 8BS 1101 A 1 HETATM 3 C C8 8BS . . . F 2 15.841 -28.532 54.229 1 49.71 ? C8 8BS 1101 A 1 HETATM 4 C C10 8BS . . . F 2 17.038 -30.67 54.211 1 51.75 ? C10 8BS 1101 A 1 HETATM 5 N N12 8BS . . . F 2 18.026 -31.326 54.992 1 46.21 ? N12 8BS 1101 A 1 HETATM 6 C C13 8BS . . . F 2 18.335 -30.43 56.051 1 49.67 ? C13 8BS 1101 A 1 HETATM 7 C C15 8BS . . . F 2 18.661 -32.649 54.826 1 42.38 ? C15 8BS 1101 A 1 HETATM 8 C C17 8BS . . . F 2 14.186 -26.696 54.566 1 54.79 ? C17 8BS 1101 A 1 HETATM 9 C C21 8BS . . . F 2 13.257 -26.088 55.514 1 55.25 ? C21 8BS 1101 A 1 HETATM 10 C C24 8BS . . . F 2 11.271 -25.521 52.506 1 50.99 ? C24 8BS 1101 A 1 HETATM 11 C C28 8BS . . . F 2 15.802 -28.612 46.486 1 46.43 ? C28 8BS 1101 A 1 HETATM 12 C C1 8BS . . . F 2 13.776 -30.762 49.143 1 58.76 ? C1 8BS 1101 A 1 HETATM 13 C C2 8BS . . . F 2 14.273 -32.143 49.539 1 60.03 ? C2 8BS 1101 A 1 HETATM 14 C C3 8BS . . . F 2 15.416 -31.84 50.54 1 48.44 ? C3 8BS 1101 A 1 HETATM 15 N N4 8BS . . . F 2 14.848 -30.76 51.371 1 47.82 ? N4 8BS 1101 A 1 HETATM 16 N N7 8BS . . . F 2 15.194 -28.979 53.1 1 57.11 ? N7 8BS 1101 A 1 HETATM 17 C C9 8BS . . . F 2 16.804 -29.406 54.851 1 51.92 ? C9 8BS 1101 A 1 HETATM 18 N N11 8BS . . . F 2 16.403 -31.1 53.073 1 45.66 ? N11 8BS 1101 A 1 HETATM 19 N N14 8BS . . . F 2 17.626 -29.285 55.991 1 53.57 ? N14 8BS 1101 A 1 HETATM 20 N N16 8BS . . . F 2 15.487 -27.29 54.787 1 49.13 ? N16 8BS 1101 A 1 HETATM 21 C C18 8BS . . . F 2 13.515 -26.518 53.321 1 53.02 ? C18 8BS 1101 A 1 HETATM 22 N N19 8BS . . . F 2 12.296 -25.885 53.549 1 51.28 ? N19 8BS 1101 A 1 HETATM 23 N N20 8BS . . . F 2 12.119 -25.605 54.888 1 57.07 ? N20 8BS 1101 A 1 HETATM 24 O O22 8BS . . . F 2 13.469 -25.991 56.87 1 49.16 ? O22 8BS 1101 A 1 HETATM 25 C C23 8BS . . . F 2 12.388 -25.616 57.728 1 52.21 ? C23 8BS 1101 A 1 HETATM 26 F F25 8BS . . . F 2 13.324 -32.785 50.273 1 59.58 ? F25 8BS 1101 A 1 HETATM 27 N N26 8BS . . . F 2 14.784 -30.048 48.348 1 57.39 ? N26 8BS 1101 A 1 HETATM 28 C C27 8BS . . . F 2 14.626 -29.288 47.189 1 49.07 ? C27 8BS 1101 A 1 HETATM 29 C C29 8BS . . . F 2 16.306 -27.395 47.213 1 51.2 ? C29 8BS 1101 A 1 HETATM 30 O O30 8BS . . . F 2 13.508 -29.134 46.712 1 55.52 ? O30 8BS 1101 A 1 # _model_server_stats.io_time_ms 114 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 22 _model_server_stats.element_count 30 #