data_7JXW
#
_model_server_result.job_id            rKegvpRkHIvatLdx1Iqu5A 
_model_server_result.datetime_utc      '2024-11-14 17:03:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jxw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1301}' 
#
_entry.id    7JXW 
#
_exptl.entry_id    7JXW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              499.607 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          118.57 
_cell.angle_gamma         90 
_cell.entry_id            7JXW 
_cell.length_a            170.248 
_cell.length_b            73.059 
_cell.length_c            119.068 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7JXW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,G,H,N 1 1 
A,E,F,M 1 2 
D,K,L,P 2 1 
C,I,J,O 2 3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_455 -x-1/2,y+1/2,-z -1 0 0 0 1 0 0 0 -1 -85.124 36.5295 0 
3 'crystal symmetry operation' 4_556 -x+1/2,y+1/2,-z+1 -1 0 0 0 1 0 0 0 -1 28.181863 36.5295 104.569506 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 106 D CYS 797 1_555 E C9 YY3 . D YY3 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.771 ? 
covale ? covale2 B SG CYS 106 A CYS 797 1_555 G C9 YY3 . A YY3 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? 
covale ? covale3 C SG CYS 106 C CYS 797 1_555 I C9 YY3 . C YY3 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 ? 
covale ? covale4 D SG CYS 106 B CYS 797 1_555 K C9 YY3 . B YY3 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? 
#
_chem_comp.formula           'C28 H33 N7 O2' 
_chem_comp.formula_weight    499.607 
_chem_comp.id                YY3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Osimertinib;AZD 9291' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 N2 YY3 sing 450 n n 
N2 C11 YY3 sing 451 n n 
N2 C12 YY3 sing 452 n n 
C10 C11 YY3 sing 453 n n 
C10 N1 YY3 sing 454 n n 
C28 N1 YY3 sing 455 n n 
N1 C2 YY3 sing 456 n n 
C14 O1 YY3 sing 457 n n 
C3 C2 YY3 doub 458 n y 
C3 C4 YY3 sing 459 n y 
C2 C1 YY3 sing 460 n y 
O1 C4 YY3 sing 461 n n 
C4 C5 YY3 doub 462 n y 
C1 N YY3 sing 463 n n 
C1 C6 YY3 doub 464 n y 
N C7 YY3 sing 465 n n 
C7 C8 YY3 sing 466 n n 
C7 O YY3 doub 467 n n 
C5 C6 YY3 sing 468 n y 
C5 N3 YY3 sing 469 n n 
C8 C9 YY3 doub 470 n n 
N3 C15 YY3 sing 471 n n 
C15 N5 YY3 doub 472 n y 
C15 N4 YY3 sing 473 n y 
C24 C25 YY3 doub 474 n y 
C24 C23 YY3 sing 475 n y 
N5 C18 YY3 sing 476 n y 
N4 C16 YY3 doub 477 n y 
C25 C26 YY3 sing 478 n y 
C23 C22 YY3 doub 479 n y 
C18 C19 YY3 sing 480 n n 
C18 C17 YY3 doub 481 n y 
C26 C19 YY3 sing 482 n y 
C26 C21 YY3 doub 483 n y 
C16 C17 YY3 sing 484 n y 
C19 C20 YY3 doub 485 n y 
C22 C21 YY3 sing 486 n y 
C21 N6 YY3 sing 487 n y 
C20 N6 YY3 sing 488 n y 
N6 C27 YY3 sing 489 n n 
C13 H1 YY3 sing 490 n n 
C13 H2 YY3 sing 491 n n 
C13 H3 YY3 sing 492 n n 
C12 H5 YY3 sing 493 n n 
C12 H6 YY3 sing 494 n n 
C12 H7 YY3 sing 495 n n 
C11 H8 YY3 sing 496 n n 
C11 H9 YY3 sing 497 n n 
C10 H10 YY3 sing 498 n n 
C10 H11 YY3 sing 499 n n 
C28 H12 YY3 sing 500 n n 
C28 H13 YY3 sing 501 n n 
C28 H14 YY3 sing 502 n n 
C3 H15 YY3 sing 503 n n 
C14 H16 YY3 sing 504 n n 
C14 H17 YY3 sing 505 n n 
C14 H18 YY3 sing 506 n n 
N H19 YY3 sing 507 n n 
C8 H20 YY3 sing 508 n n 
C9 H22 YY3 sing 509 n n 
C9 H23 YY3 sing 510 n n 
C6 H25 YY3 sing 511 n n 
N3 H26 YY3 sing 512 n n 
C16 H27 YY3 sing 513 n n 
C17 H28 YY3 sing 514 n n 
C25 H29 YY3 sing 515 n n 
C24 H30 YY3 sing 516 n n 
C23 H31 YY3 sing 517 n n 
C22 H32 YY3 sing 518 n n 
C27 H33 YY3 sing 519 n n 
C27 H34 YY3 sing 520 n n 
C27 H35 YY3 sing 521 n n 
C20 H36 YY3 sing 522 n n 
#
_atom_sites.entry_id                     7JXW 
_atom_sites.fract_transf_matrix[1][1]    0.005874 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003198 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013688 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009563 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 YY3 D 1 1301 1301 YY3 YY3 . 
F 3 VNS D 1 1302 1401 VNS J63 . 
G 2 YY3 A 1 1301 1301 YY3 YY3 . 
H 3 VNS A 1 1302 1401 VNS J63 . 
I 2 YY3 C 1 1301 1301 YY3 YY3 . 
J 3 VNS C 1 1302 1401 VNS J63 . 
K 2 YY3 B 1 1301 1301 YY3 YY3 . 
L 3 VNS B 1 1302 1401 VNS J63 . 
M 4 HOH D 1 1401 40 HOH HOH . 
M 4 HOH D 2 1402 39 HOH HOH . 
M 4 HOH D 3 1403 37 HOH HOH . 
M 4 HOH D 4 1404 14 HOH HOH . 
M 4 HOH D 5 1405 43 HOH HOH . 
M 4 HOH D 6 1406 52 HOH HOH . 
M 4 HOH D 7 1407 17 HOH HOH . 
M 4 HOH D 8 1408 65 HOH HOH . 
N 4 HOH A 1 1401 56 HOH HOH . 
N 4 HOH A 2 1402 9 HOH HOH . 
N 4 HOH A 3 1403 35 HOH HOH . 
N 4 HOH A 4 1404 1 HOH HOH . 
N 4 HOH A 5 1405 42 HOH HOH . 
N 4 HOH A 6 1406 24 HOH HOH . 
N 4 HOH A 7 1407 2 HOH HOH . 
N 4 HOH A 8 1408 31 HOH HOH . 
N 4 HOH A 9 1409 51 HOH HOH . 
N 4 HOH A 10 1410 48 HOH HOH . 
N 4 HOH A 11 1411 18 HOH HOH . 
N 4 HOH A 12 1412 62 HOH HOH . 
N 4 HOH A 13 1413 44 HOH HOH . 
N 4 HOH A 14 1414 47 HOH HOH . 
N 4 HOH A 15 1415 66 HOH HOH . 
N 4 HOH A 16 1416 63 HOH HOH . 
N 4 HOH A 17 1417 21 HOH HOH . 
N 4 HOH A 18 1418 71 HOH HOH . 
N 4 HOH A 19 1419 26 HOH HOH . 
N 4 HOH A 20 1420 10 HOH HOH . 
O 4 HOH C 1 1401 22 HOH HOH . 
O 4 HOH C 2 1402 27 HOH HOH . 
O 4 HOH C 3 1403 32 HOH HOH . 
O 4 HOH C 4 1404 5 HOH HOH . 
O 4 HOH C 5 1405 45 HOH HOH . 
O 4 HOH C 6 1406 4 HOH HOH . 
O 4 HOH C 7 1407 58 HOH HOH . 
O 4 HOH C 8 1408 67 HOH HOH . 
O 4 HOH C 9 1409 12 HOH HOH . 
O 4 HOH C 10 1410 36 HOH HOH . 
O 4 HOH C 11 1411 7 HOH HOH . 
O 4 HOH C 12 1412 33 HOH HOH . 
O 4 HOH C 13 1413 34 HOH HOH . 
P 4 HOH B 1 1401 19 HOH HOH . 
P 4 HOH B 2 1402 8 HOH HOH . 
P 4 HOH B 3 1403 41 HOH HOH . 
P 4 HOH B 4 1404 6 HOH HOH . 
P 4 HOH B 5 1405 54 HOH HOH . 
P 4 HOH B 6 1406 20 HOH HOH . 
P 4 HOH B 7 1407 3 HOH HOH . 
P 4 HOH B 8 1408 16 HOH HOH . 
P 4 HOH B 9 1409 38 HOH HOH . 
P 4 HOH B 10 1410 50 HOH HOH . 
P 4 HOH B 11 1411 69 HOH HOH . 
P 4 HOH B 12 1412 29 HOH HOH . 
P 4 HOH B 13 1413 46 HOH HOH . 
P 4 HOH B 14 1414 25 HOH HOH . 
P 4 HOH B 15 1415 11 HOH HOH . 
P 4 HOH B 16 1416 23 HOH HOH . 
P 4 HOH B 17 1417 55 HOH HOH . 
P 4 HOH B 18 1418 70 HOH HOH . 
P 4 HOH B 19 1419 53 HOH HOH . 
P 4 HOH B 20 1420 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 YY3 . . . G 2 -31.87 73.085 8.783 1 71.7 ? C13 YY3 1301 A 1 
HETATM 2 N N2 YY3 . . . G 2 -30.696 72.477 9.536 1 74.3 ? N2 YY3 1301 A 1 
HETATM 3 C C12 YY3 . . . G 2 -30.866 70.996 9.299 1 61.78 ? C12 YY3 1301 A 1 
HETATM 4 C C11 YY3 . . . G 2 -29.364 72.963 8.89 1 79.1 ? C11 YY3 1301 A 1 
HETATM 5 C C10 YY3 . . . G 2 -28.153 71.877 8.932 1 66.65 ? C10 YY3 1301 A 1 
HETATM 6 N N1 YY3 . . . G 2 -27.43 71.761 7.581 1 66.95 ? N1 YY3 1301 A 1 
HETATM 7 C C28 YY3 . . . G 2 -26.322 72.719 7.302 1 73.52 ? C28 YY3 1301 A 1 
HETATM 8 C C3 YY3 . . . G 2 -29.174 70.875 5.972 1 45.37 ? C3 YY3 1301 A 1 
HETATM 9 C C4 YY3 . . . G 2 -29.717 69.986 4.999 1 45.79 ? C4 YY3 1301 A 1 
HETATM 10 O O1 YY3 . . . G 2 -31.038 70.189 4.461 1 46.29 ? O1 YY3 1301 A 1 
HETATM 11 C C14 YY3 . . . G 2 -31.86 71.177 5.075 1 34.46 ? C14 YY3 1301 A 1 
HETATM 12 C C2 YY3 . . . G 2 -27.852 70.765 6.561 1 49.47 ? C2 YY3 1301 A 1 
HETATM 13 C C1 YY3 . . . G 2 -27.074 69.652 6.118 1 48.68 ? C1 YY3 1301 A 1 
HETATM 14 N N YY3 . . . G 2 -25.695 69.436 6.672 1 44 ? N YY3 1301 A 1 
HETATM 15 C C7 YY3 . . . G 2 -24.657 68.415 6.218 1 60.41 ? C7 YY3 1301 A 1 
HETATM 16 O O YY3 . . . G 2 -24.917 67.606 5.35 1 54.48 ? O YY3 1301 A 1 
HETATM 17 C C8 YY3 . . . G 2 -23.259 68.273 6.859 1 60.02 ? C8 YY3 1301 A 1 
HETATM 18 C C9 YY3 . . . G 2 -23.014 67.457 7.928 1 53.88 ? C9 YY3 1301 A 1 
HETATM 19 C C6 YY3 . . . G 2 -27.67 68.788 5.117 1 47.75 ? C6 YY3 1301 A 1 
HETATM 20 C C5 YY3 . . . G 2 -28.984 68.925 4.51 1 53.9 ? C5 YY3 1301 A 1 
HETATM 21 N N3 YY3 . . . G 2 -29.557 67.975 3.471 1 58.29 ? N3 YY3 1301 A 1 
HETATM 22 C C15 YY3 . . . G 2 -28.82 67.33 2.437 1 47.4 ? C15 YY3 1301 A 1 
HETATM 23 N N5 YY3 . . . G 2 -27.482 67.553 2.316 1 44.72 ? N5 YY3 1301 A 1 
HETATM 24 N N4 YY3 . . . G 2 -29.526 66.539 1.589 1 50.88 ? N4 YY3 1301 A 1 
HETATM 25 C C16 YY3 . . . G 2 -28.82 65.953 0.608 1 49.48 ? C16 YY3 1301 A 1 
HETATM 26 C C17 YY3 . . . G 2 -27.416 66.138 0.409 1 49.09 ? C17 YY3 1301 A 1 
HETATM 27 C C18 YY3 . . . G 2 -26.799 66.975 1.328 1 39.43 ? C18 YY3 1301 A 1 
HETATM 28 C C19 YY3 . . . G 2 -25.389 67.251 1.316 1 43 ? C19 YY3 1301 A 1 
HETATM 29 C C26 YY3 . . . G 2 -24.748 68.373 1.976 1 57.16 ? C26 YY3 1301 A 1 
HETATM 30 C C25 YY3 . . . G 2 -25.268 69.48 2.672 1 62.38 ? C25 YY3 1301 A 1 
HETATM 31 C C24 YY3 . . . G 2 -24.414 70.454 3.192 1 77.67 ? C24 YY3 1301 A 1 
HETATM 32 C C23 YY3 . . . G 2 -23.011 70.33 3.02 1 81.2 ? C23 YY3 1301 A 1 
HETATM 33 C C22 YY3 . . . G 2 -22.472 69.242 2.329 1 67.81 ? C22 YY3 1301 A 1 
HETATM 34 C C21 YY3 . . . G 2 -23.349 68.272 1.82 1 63.27 ? C21 YY3 1301 A 1 
HETATM 35 N N6 YY3 . . . G 2 -23.125 67.098 1.091 1 68.83 ? N6 YY3 1301 A 1 
HETATM 36 C C27 YY3 . . . G 2 -21.777 66.622 0.709 1 73.7 ? C27 YY3 1301 A 1 
HETATM 37 C C20 YY3 . . . G 2 -24.333 66.467 0.806 1 38.87 ? C20 YY3 1301 A 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           37 
#