data_7JXX # _model_server_result.job_id c8I2To8AIZeDlYynccYyBQ _model_server_result.datetime_utc '2025-01-11 22:43:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7jxx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7JXX # _exptl.entry_id 7JXX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.498 _cell.angle_gamma 90 _cell.entry_id 7JXX _cell.length_a 173.837 _cell.length_b 34.337 _cell.length_c 48.666 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7JXX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 99 A GLN 110 1_555 E NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc2 A OG1 THR 157 A THR 168 1_555 E NA NA . A NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc3 C NA NA . A NA 402 1_555 F O HOH . A HOH 624 2_757 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc4 C NA NA . A NA 402 1_555 F O HOH . A HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? metalc ? metalc5 D NA NA . A NA 403 1_555 F O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? metalc ? metalc6 D NA NA . A NA 403 1_555 F O HOH . A HOH 748 2_757 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc7 E NA NA . A NA 404 1_555 F O HOH . A HOH 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7JXX _atom_sites.fract_transf_matrix[1][1] 0.005753 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001381 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021132 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VP7 A 1 401 401 VP7 LIG . C 3 NA A 1 402 1 NA NA . D 3 NA A 1 403 2 NA NA . E 3 NA A 1 404 3 NA NA . F 4 HOH A 1 501 181 HOH HOH . F 4 HOH A 2 502 273 HOH HOH . F 4 HOH A 3 503 221 HOH HOH . F 4 HOH A 4 504 103 HOH HOH . F 4 HOH A 5 505 129 HOH HOH . F 4 HOH A 6 506 251 HOH HOH . F 4 HOH A 7 507 165 HOH HOH . F 4 HOH A 8 508 147 HOH HOH . F 4 HOH A 9 509 228 HOH HOH . F 4 HOH A 10 510 272 HOH HOH . F 4 HOH A 11 511 188 HOH HOH . F 4 HOH A 12 512 115 HOH HOH . F 4 HOH A 13 513 268 HOH HOH . F 4 HOH A 14 514 123 HOH HOH . F 4 HOH A 15 515 239 HOH HOH . F 4 HOH A 16 516 170 HOH HOH . F 4 HOH A 17 517 216 HOH HOH . F 4 HOH A 18 518 155 HOH HOH . F 4 HOH A 19 519 250 HOH HOH . F 4 HOH A 20 520 284 HOH HOH . F 4 HOH A 21 521 65 HOH HOH . F 4 HOH A 22 522 145 HOH HOH . F 4 HOH A 23 523 274 HOH HOH . F 4 HOH A 24 524 142 HOH HOH . F 4 HOH A 25 525 171 HOH HOH . F 4 HOH A 26 526 117 HOH HOH . F 4 HOH A 27 527 56 HOH HOH . F 4 HOH A 28 528 203 HOH HOH . F 4 HOH A 29 529 164 HOH HOH . F 4 HOH A 30 530 140 HOH HOH . F 4 HOH A 31 531 31 HOH HOH . F 4 HOH A 32 532 234 HOH HOH . F 4 HOH A 33 533 100 HOH HOH . F 4 HOH A 34 534 70 HOH HOH . F 4 HOH A 35 535 12 HOH HOH . F 4 HOH A 36 536 7 HOH HOH . F 4 HOH A 37 537 119 HOH HOH . F 4 HOH A 38 538 88 HOH HOH . F 4 HOH A 39 539 82 HOH HOH . F 4 HOH A 40 540 5 HOH HOH . F 4 HOH A 41 541 205 HOH HOH . F 4 HOH A 42 542 83 HOH HOH . F 4 HOH A 43 543 265 HOH HOH . F 4 HOH A 44 544 215 HOH HOH . F 4 HOH A 45 545 44 HOH HOH . F 4 HOH A 46 546 60 HOH HOH . F 4 HOH A 47 547 73 HOH HOH . F 4 HOH A 48 548 77 HOH HOH . F 4 HOH A 49 549 126 HOH HOH . F 4 HOH A 50 550 179 HOH HOH . F 4 HOH A 51 551 153 HOH HOH . F 4 HOH A 52 552 178 HOH HOH . F 4 HOH A 53 553 120 HOH HOH . F 4 HOH A 54 554 92 HOH HOH . F 4 HOH A 55 555 220 HOH HOH . F 4 HOH A 56 556 27 HOH HOH . F 4 HOH A 57 557 51 HOH HOH . F 4 HOH A 58 558 288 HOH HOH . F 4 HOH A 59 559 238 HOH HOH . F 4 HOH A 60 560 209 HOH HOH . F 4 HOH A 61 561 37 HOH HOH . F 4 HOH A 62 562 90 HOH HOH . F 4 HOH A 63 563 38 HOH HOH . F 4 HOH A 64 564 195 HOH HOH . F 4 HOH A 65 565 24 HOH HOH . F 4 HOH A 66 566 236 HOH HOH . F 4 HOH A 67 567 11 HOH HOH . F 4 HOH A 68 568 45 HOH HOH . F 4 HOH A 69 569 163 HOH HOH . F 4 HOH A 70 570 21 HOH HOH . F 4 HOH A 71 571 135 HOH HOH . F 4 HOH A 72 572 36 HOH HOH . F 4 HOH A 73 573 22 HOH HOH . F 4 HOH A 74 574 63 HOH HOH . F 4 HOH A 75 575 99 HOH HOH . F 4 HOH A 76 576 28 HOH HOH . F 4 HOH A 77 577 30 HOH HOH . F 4 HOH A 78 578 134 HOH HOH . F 4 HOH A 79 579 26 HOH HOH . F 4 HOH A 80 580 67 HOH HOH . F 4 HOH A 81 581 19 HOH HOH . F 4 HOH A 82 582 139 HOH HOH . F 4 HOH A 83 583 42 HOH HOH . F 4 HOH A 84 584 211 HOH HOH . F 4 HOH A 85 585 105 HOH HOH . F 4 HOH A 86 586 224 HOH HOH . F 4 HOH A 87 587 46 HOH HOH . F 4 HOH A 88 588 151 HOH HOH . F 4 HOH A 89 589 13 HOH HOH . F 4 HOH A 90 590 6 HOH HOH . F 4 HOH A 91 591 192 HOH HOH . F 4 HOH A 92 592 72 HOH HOH . F 4 HOH A 93 593 137 HOH HOH . F 4 HOH A 94 594 53 HOH HOH . F 4 HOH A 95 595 62 HOH HOH . F 4 HOH A 96 596 49 HOH HOH . F 4 HOH A 97 597 133 HOH HOH . F 4 HOH A 98 598 182 HOH HOH . F 4 HOH A 99 599 198 HOH HOH . F 4 HOH A 100 600 76 HOH HOH . F 4 HOH A 101 601 96 HOH HOH . F 4 HOH A 102 602 3 HOH HOH . F 4 HOH A 103 603 85 HOH HOH . F 4 HOH A 104 604 80 HOH HOH . F 4 HOH A 105 605 104 HOH HOH . F 4 HOH A 106 606 95 HOH HOH . F 4 HOH A 107 607 102 HOH HOH . F 4 HOH A 108 608 75 HOH HOH . F 4 HOH A 109 609 93 HOH HOH . F 4 HOH A 110 610 213 HOH HOH . F 4 HOH A 111 611 23 HOH HOH . F 4 HOH A 112 612 87 HOH HOH . F 4 HOH A 113 613 114 HOH HOH . F 4 HOH A 114 614 86 HOH HOH . F 4 HOH A 115 615 152 HOH HOH . F 4 HOH A 116 616 279 HOH HOH . F 4 HOH A 117 617 132 HOH HOH . F 4 HOH A 118 618 200 HOH HOH . F 4 HOH A 119 619 10 HOH HOH . F 4 HOH A 120 620 47 HOH HOH . F 4 HOH A 121 621 109 HOH HOH . F 4 HOH A 122 622 180 HOH HOH . F 4 HOH A 123 623 175 HOH HOH . F 4 HOH A 124 624 41 HOH HOH . F 4 HOH A 125 625 229 HOH HOH . F 4 HOH A 126 626 59 HOH HOH . F 4 HOH A 127 627 144 HOH HOH . F 4 HOH A 128 628 39 HOH HOH . F 4 HOH A 129 629 4 HOH HOH . F 4 HOH A 130 630 14 HOH HOH . F 4 HOH A 131 631 116 HOH HOH . F 4 HOH A 132 632 15 HOH HOH . F 4 HOH A 133 633 61 HOH HOH . F 4 HOH A 134 634 9 HOH HOH . F 4 HOH A 135 635 190 HOH HOH . F 4 HOH A 136 636 17 HOH HOH . F 4 HOH A 137 637 214 HOH HOH . F 4 HOH A 138 638 207 HOH HOH . F 4 HOH A 139 639 141 HOH HOH . F 4 HOH A 140 640 69 HOH HOH . F 4 HOH A 141 641 29 HOH HOH . F 4 HOH A 142 642 84 HOH HOH . F 4 HOH A 143 643 66 HOH HOH . F 4 HOH A 144 644 223 HOH HOH . F 4 HOH A 145 645 106 HOH HOH . F 4 HOH A 146 646 94 HOH HOH . F 4 HOH A 147 647 40 HOH HOH . F 4 HOH A 148 648 253 HOH HOH . F 4 HOH A 149 649 8 HOH HOH . F 4 HOH A 150 650 283 HOH HOH . F 4 HOH A 151 651 108 HOH HOH . F 4 HOH A 152 652 33 HOH HOH . F 4 HOH A 153 653 231 HOH HOH . F 4 HOH A 154 654 264 HOH HOH . F 4 HOH A 155 655 184 HOH HOH . F 4 HOH A 156 656 143 HOH HOH . F 4 HOH A 157 657 97 HOH HOH . F 4 HOH A 158 658 261 HOH HOH . F 4 HOH A 159 659 74 HOH HOH . F 4 HOH A 160 660 230 HOH HOH . F 4 HOH A 161 661 202 HOH HOH . F 4 HOH A 162 662 43 HOH HOH . F 4 HOH A 163 663 194 HOH HOH . F 4 HOH A 164 664 57 HOH HOH . F 4 HOH A 165 665 34 HOH HOH . F 4 HOH A 166 666 101 HOH HOH . F 4 HOH A 167 667 20 HOH HOH . F 4 HOH A 168 668 98 HOH HOH . F 4 HOH A 169 669 107 HOH HOH . F 4 HOH A 170 670 242 HOH HOH . F 4 HOH A 171 671 127 HOH HOH . F 4 HOH A 172 672 149 HOH HOH . F 4 HOH A 173 673 2 HOH HOH . F 4 HOH A 174 674 254 HOH HOH . F 4 HOH A 175 675 235 HOH HOH . F 4 HOH A 176 676 176 HOH HOH . F 4 HOH A 177 677 267 HOH HOH . F 4 HOH A 178 678 18 HOH HOH . F 4 HOH A 179 679 252 HOH HOH . F 4 HOH A 180 680 138 HOH HOH . F 4 HOH A 181 681 148 HOH HOH . F 4 HOH A 182 682 52 HOH HOH . F 4 HOH A 183 683 289 HOH HOH . F 4 HOH A 184 684 25 HOH HOH . F 4 HOH A 185 685 50 HOH HOH . F 4 HOH A 186 686 110 HOH HOH . F 4 HOH A 187 687 64 HOH HOH . F 4 HOH A 188 688 191 HOH HOH . F 4 HOH A 189 689 227 HOH HOH . F 4 HOH A 190 690 89 HOH HOH . F 4 HOH A 191 691 112 HOH HOH . F 4 HOH A 192 692 1 HOH HOH . F 4 HOH A 193 693 161 HOH HOH . F 4 HOH A 194 694 167 HOH HOH . F 4 HOH A 195 695 118 HOH HOH . F 4 HOH A 196 696 189 HOH HOH . F 4 HOH A 197 697 121 HOH HOH . F 4 HOH A 198 698 91 HOH HOH . F 4 HOH A 199 699 196 HOH HOH . F 4 HOH A 200 700 286 HOH HOH . F 4 HOH A 201 701 131 HOH HOH . F 4 HOH A 202 702 226 HOH HOH . F 4 HOH A 203 703 68 HOH HOH . F 4 HOH A 204 704 247 HOH HOH . F 4 HOH A 205 705 287 HOH HOH . F 4 HOH A 206 706 16 HOH HOH . F 4 HOH A 207 707 130 HOH HOH . F 4 HOH A 208 708 277 HOH HOH . F 4 HOH A 209 709 225 HOH HOH . F 4 HOH A 210 710 232 HOH HOH . F 4 HOH A 211 711 113 HOH HOH . F 4 HOH A 212 712 55 HOH HOH . F 4 HOH A 213 713 269 HOH HOH . F 4 HOH A 214 714 217 HOH HOH . F 4 HOH A 215 715 282 HOH HOH . F 4 HOH A 216 716 243 HOH HOH . F 4 HOH A 217 717 276 HOH HOH . F 4 HOH A 218 718 255 HOH HOH . F 4 HOH A 219 719 249 HOH HOH . F 4 HOH A 220 720 54 HOH HOH . F 4 HOH A 221 721 48 HOH HOH . F 4 HOH A 222 722 160 HOH HOH . F 4 HOH A 223 723 183 HOH HOH . F 4 HOH A 224 724 291 HOH HOH . F 4 HOH A 225 725 197 HOH HOH . F 4 HOH A 226 726 271 HOH HOH . F 4 HOH A 227 727 201 HOH HOH . F 4 HOH A 228 728 256 HOH HOH . F 4 HOH A 229 729 174 HOH HOH . F 4 HOH A 230 730 193 HOH HOH . F 4 HOH A 231 731 248 HOH HOH . F 4 HOH A 232 732 262 HOH HOH . F 4 HOH A 233 733 270 HOH HOH . F 4 HOH A 234 734 241 HOH HOH . F 4 HOH A 235 735 35 HOH HOH . F 4 HOH A 236 736 260 HOH HOH . F 4 HOH A 237 737 168 HOH HOH . F 4 HOH A 238 738 81 HOH HOH . F 4 HOH A 239 739 244 HOH HOH . F 4 HOH A 240 740 185 HOH HOH . F 4 HOH A 241 741 212 HOH HOH . F 4 HOH A 242 742 233 HOH HOH . F 4 HOH A 243 743 259 HOH HOH . F 4 HOH A 244 744 32 HOH HOH . F 4 HOH A 245 745 159 HOH HOH . F 4 HOH A 246 746 208 HOH HOH . F 4 HOH A 247 747 172 HOH HOH . F 4 HOH A 248 748 162 HOH HOH . F 4 HOH A 249 749 186 HOH HOH . F 4 HOH A 250 750 173 HOH HOH . F 4 HOH A 251 751 199 HOH HOH . F 4 HOH A 252 752 237 HOH HOH . F 4 HOH A 253 753 111 HOH HOH . F 4 HOH A 254 754 177 HOH HOH . F 4 HOH A 255 755 71 HOH HOH . F 4 HOH A 256 756 136 HOH HOH . F 4 HOH A 257 757 122 HOH HOH . F 4 HOH A 258 758 219 HOH HOH . F 4 HOH A 259 759 128 HOH HOH . F 4 HOH A 260 760 125 HOH HOH . F 4 HOH A 261 761 158 HOH HOH . F 4 HOH A 262 762 285 HOH HOH . F 4 HOH A 263 763 278 HOH HOH . F 4 HOH A 264 764 275 HOH HOH . F 4 HOH A 265 765 222 HOH HOH . F 4 HOH A 266 766 206 HOH HOH . F 4 HOH A 267 767 150 HOH HOH . F 4 HOH A 268 768 78 HOH HOH . F 4 HOH A 269 769 290 HOH HOH . F 4 HOH A 270 770 146 HOH HOH . F 4 HOH A 271 771 210 HOH HOH . F 4 HOH A 272 772 204 HOH HOH . F 4 HOH A 273 773 266 HOH HOH . F 4 HOH A 274 774 156 HOH HOH . F 4 HOH A 275 775 245 HOH HOH . F 4 HOH A 276 776 58 HOH HOH . F 4 HOH A 277 777 258 HOH HOH . F 4 HOH A 278 778 218 HOH HOH . F 4 HOH A 279 779 280 HOH HOH . F 4 HOH A 280 780 257 HOH HOH . F 4 HOH A 281 781 79 HOH HOH . F 4 HOH A 282 782 169 HOH HOH . F 4 HOH A 283 783 124 HOH HOH . F 4 HOH A 284 784 187 HOH HOH . F 4 HOH A 285 785 154 HOH HOH . F 4 HOH A 286 786 157 HOH HOH . F 4 HOH A 287 787 246 HOH HOH . F 4 HOH A 288 788 240 HOH HOH . F 4 HOH A 289 789 166 HOH HOH . F 4 HOH A 290 790 281 HOH HOH . F 4 HOH A 291 791 263 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 168.614 _atom_site.Cartn_y 21.184 _atom_site.Cartn_z 54.887 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #