data_7JZ2
#
_model_server_result.job_id            b9kwmNXQWyfpYTOl5W-j9Q 
_model_server_result.datetime_utc      '2024-11-04 22:47:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jz2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":601}' 
#
_entry.id    7JZ2 
#
_exptl.entry_id    7JZ2 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 M N N 
? 5 U N N 
? 5 CA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O MET 356 A MET 356 1_555 N NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc2 A O GLY 358 A GLY 358 1_555 N NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc3 A O GLU 388 A GLU 388 1_555 N NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc4 B OD1 ASP 63 B ASP 63 1_555 O FE1 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc5 B N ILE 209 B ILE 209 1_555 Q FE3 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc6 C NE2 HIS 84 C HIS 84 1_555 S FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? 
metalc ? metalc7 D NE2 HIS 71 D HIS 71 1_555 S FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
metalc ? metalc8 E O MET 356 E MET 356 1_555 V NA NA . E NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? 
metalc ? metalc9 E O GLY 358 E GLY 358 1_555 V NA NA . E NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc10 E O GLU 388 E GLU 388 1_555 V NA NA . E NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc11 F OD1 ASP 63 F ASP 63 1_555 W FE1 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc12 F N ILE 209 F ILE 209 1_555 Y FE3 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc13 G NE2 HIS 84 G HIS 84 1_555 Z FE HEM . G HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? 
metalc ? metalc14 I O MET 356 I MET 356 1_555 DA NA NA . I NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc15 I O GLY 358 I GLY 358 1_555 DA NA NA . I NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc16 I O GLU 388 I GLU 388 1_555 DA NA NA . I NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc17 J OD1 ASP 63 J ASP 63 1_555 EA FE1 FES . J FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc18 J N ILE 209 J ILE 209 1_555 GA FE3 F3S . J F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc19 K NE2 HIS 84 K HIS 84 1_555 HA FE HEM . K HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? 
metalc ? metalc20 HA FE HEM . K HEM 201 1_555 L NE2 HIS 71 L HIS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 224 n n 
PA O2A FAD sing 225 n n 
PA O5B FAD sing 226 n n 
PA O3P FAD sing 227 n n 
O2A HOA2 FAD sing 228 n n 
O5B C5B FAD sing 229 n n 
C5B C4B FAD sing 230 n n 
C5B H51A FAD sing 231 n n 
C5B H52A FAD sing 232 n n 
C4B O4B FAD sing 233 n n 
C4B C3B FAD sing 234 n n 
C4B H4B FAD sing 235 n n 
O4B C1B FAD sing 236 n n 
C3B O3B FAD sing 237 n n 
C3B C2B FAD sing 238 n n 
C3B H3B FAD sing 239 n n 
O3B HO3A FAD sing 240 n n 
C2B O2B FAD sing 241 n n 
C2B C1B FAD sing 242 n n 
C2B H2B FAD sing 243 n n 
O2B HO2A FAD sing 244 n n 
C1B N9A FAD sing 245 n n 
C1B H1B FAD sing 246 n n 
N9A C8A FAD sing 247 n y 
N9A C4A FAD sing 248 n y 
C8A N7A FAD doub 249 n y 
C8A H8A FAD sing 250 n n 
N7A C5A FAD sing 251 n y 
C5A C6A FAD sing 252 n y 
C5A C4A FAD doub 253 n y 
C6A N6A FAD sing 254 n n 
C6A N1A FAD doub 255 n y 
N6A H61A FAD sing 256 n n 
N6A H62A FAD sing 257 n n 
N1A C2A FAD sing 258 n y 
C2A N3A FAD doub 259 n y 
C2A H2A FAD sing 260 n n 
N3A C4A FAD sing 261 n y 
N1 C2 FAD sing 262 n n 
N1 C10 FAD doub 263 n n 
C2 O2 FAD doub 264 n n 
C2 N3 FAD sing 265 n n 
N3 C4 FAD sing 266 n n 
N3 HN3 FAD sing 267 n n 
C4 O4 FAD doub 268 n n 
C4 C4X FAD sing 269 n n 
C4X N5 FAD doub 270 n n 
C4X C10 FAD sing 271 n n 
N5 C5X FAD sing 272 n n 
C5X C6 FAD doub 273 n y 
C5X C9A FAD sing 274 n y 
C6 C7 FAD sing 275 n y 
C6 H6 FAD sing 276 n n 
C7 C7M FAD sing 277 n n 
C7 C8 FAD doub 278 n y 
C7M HM71 FAD sing 279 n n 
C7M HM72 FAD sing 280 n n 
C7M HM73 FAD sing 281 n n 
C8 C8M FAD sing 282 n n 
C8 C9 FAD sing 283 n y 
C8M HM81 FAD sing 284 n n 
C8M HM82 FAD sing 285 n n 
C8M HM83 FAD sing 286 n n 
C9 C9A FAD doub 287 n y 
C9 H9 FAD sing 288 n n 
C9A N10 FAD sing 289 n n 
N10 C10 FAD sing 290 n n 
N10 C1' FAD sing 291 n n 
C1' C2' FAD sing 292 n n 
C1' "H1'1" FAD sing 293 n n 
C1' "H1'2" FAD sing 294 n n 
C2' O2' FAD sing 295 n n 
C2' C3' FAD sing 296 n n 
C2' H2' FAD sing 297 n n 
O2' HO2' FAD sing 298 n n 
C3' O3' FAD sing 299 n n 
C3' C4' FAD sing 300 n n 
C3' H3' FAD sing 301 n n 
O3' HO3' FAD sing 302 n n 
C4' O4' FAD sing 303 n n 
C4' C5' FAD sing 304 n n 
C4' H4' FAD sing 305 n n 
O4' HO4' FAD sing 306 n n 
C5' O5' FAD sing 307 n n 
C5' "H5'1" FAD sing 308 n n 
C5' "H5'2" FAD sing 309 n n 
O5' P FAD sing 310 n n 
P O1P FAD doub 311 n n 
P O2P FAD sing 312 n n 
P O3P FAD sing 313 n n 
O2P HOP2 FAD sing 314 n n 
#
_atom_sites.entry_id                     7JZ2 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 5 FAD A 1 601 601 FAD FAD . 
N 6 NA A 1 602 1590 NA NA . 
O 7 FES B 1 301 302 FES FES . 
P 8 SF4 B 1 302 303 SF4 SF4 . 
Q 9 F3S B 1 303 304 F3S F3S . 
R 10 3PE C 1 1301 1301 3PE 3PE . 
S 11 HEM D 1 201 1129 HEM HEM . 
T 12 UQ2 D 1 202 1201 UQ2 UQ2 . 
U 5 FAD E 1 601 601 FAD FAD . 
V 6 NA E 1 602 1590 NA NA . 
W 7 FES F 1 301 302 FES FES . 
X 8 SF4 F 1 302 303 SF4 SF4 . 
Y 9 F3S F 1 303 304 F3S F3S . 
Z 11 HEM G 1 201 1129 HEM HEM . 
AA 10 3PE G 1 202 1301 3PE 3PE . 
BA 12 UQ2 H 1 1201 1201 UQ2 UQ2 . 
CA 5 FAD I 1 601 601 FAD FAD . 
DA 6 NA I 1 602 1590 NA NA . 
EA 7 FES J 1 301 302 FES FES . 
FA 8 SF4 J 1 302 303 SF4 SF4 . 
GA 9 F3S J 1 303 304 F3S F3S . 
HA 11 HEM K 1 201 1129 HEM HEM . 
IA 10 3PE K 1 202 1301 3PE 3PE . 
JA 12 UQ2 L 1 1201 1201 UQ2 UQ2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . M 5 196.295 220.284 170.787 1 28.53 ? PA FAD 601 A 1 
HETATM 2 O O1A FAD . . . M 5 197.161 221.399 171.242 1 28.53 -1 O1A FAD 601 A 1 
HETATM 3 O O2A FAD . . . M 5 195.265 219.811 171.816 1 28.53 ? O2A FAD 601 A 1 
HETATM 4 O O5B FAD . . . M 5 197.173 219.063 170.314 1 28.53 ? O5B FAD 601 A 1 
HETATM 5 C C5B FAD . . . M 5 198.609 219.167 170.219 1 28.53 ? C5B FAD 601 A 1 
HETATM 6 C C4B FAD . . . M 5 199.26 218.192 171.167 1 28.53 ? C4B FAD 601 A 1 
HETATM 7 O O4B FAD . . . M 5 200.512 217.734 170.604 1 28.53 ? O4B FAD 601 A 1 
HETATM 8 C C3B FAD . . . M 5 199.604 218.761 172.541 1 28.53 ? C3B FAD 601 A 1 
HETATM 9 O O3B FAD . . . M 5 199.477 217.766 173.55 1 28.53 ? O3B FAD 601 A 1 
HETATM 10 C C2B FAD . . . M 5 201.055 219.208 172.359 1 28.53 ? C2B FAD 601 A 1 
HETATM 11 O O2B FAD . . . M 5 201.769 219.227 173.59 1 28.53 ? O2B FAD 601 A 1 
HETATM 12 C C1B FAD . . . M 5 201.587 218.106 171.446 1 28.53 ? C1B FAD 601 A 1 
HETATM 13 N N9A FAD . . . M 5 202.713 218.514 170.61 1 28.53 ? N9A FAD 601 A 1 
HETATM 14 C C8A FAD . . . M 5 202.847 219.688 169.917 1 28.53 ? C8A FAD 601 A 1 
HETATM 15 N N7A FAD . . . M 5 203.971 219.791 169.249 1 28.53 ? N7A FAD 601 A 1 
HETATM 16 C C5A FAD . . . M 5 204.626 218.6 169.524 1 28.53 ? C5A FAD 601 A 1 
HETATM 17 C C6A FAD . . . M 5 205.872 218.085 169.117 1 28.53 ? C6A FAD 601 A 1 
HETATM 18 N N6A FAD . . . M 5 206.717 218.734 168.312 1 28.53 ? N6A FAD 601 A 1 
HETATM 19 N N1A FAD . . . M 5 206.224 216.862 169.573 1 28.53 ? N1A FAD 601 A 1 
HETATM 20 C C2A FAD . . . M 5 205.384 216.209 170.378 1 28.53 ? C2A FAD 601 A 1 
HETATM 21 N N3A FAD . . . M 5 204.186 216.592 170.828 1 28.53 ? N3A FAD 601 A 1 
HETATM 22 C C4A FAD . . . M 5 203.863 217.803 170.362 1 28.53 ? C4A FAD 601 A 1 
HETATM 23 N N1 FAD . . . M 5 187.307 225.696 169.738 1 28.53 ? N1 FAD 601 A 1 
HETATM 24 C C2 FAD . . . M 5 185.957 225.542 169.87 1 28.53 ? C2 FAD 601 A 1 
HETATM 25 O O2 FAD . . . M 5 185.305 224.833 169.095 1 28.53 ? O2 FAD 601 A 1 
HETATM 26 N N3 FAD . . . M 5 185.291 226.191 170.896 1 28.53 ? N3 FAD 601 A 1 
HETATM 27 C C4 FAD . . . M 5 185.862 227.014 171.843 1 28.53 ? C4 FAD 601 A 1 
HETATM 28 O O4 FAD . . . M 5 185.165 227.538 172.71 1 28.53 ? O4 FAD 601 A 1 
HETATM 29 C C4X FAD . . . M 5 187.295 227.172 171.694 1 28.53 ? C4X FAD 601 A 1 
HETATM 30 N N5 FAD . . . M 5 187.921 227.934 172.547 1 28.53 ? N5 FAD 601 A 1 
HETATM 31 C C5X FAD . . . M 5 189.291 228.084 172.403 1 28.53 ? C5X FAD 601 A 1 
HETATM 32 C C6 FAD . . . M 5 189.977 228.895 173.305 1 28.53 ? C6 FAD 601 A 1 
HETATM 33 C C7 FAD . . . M 5 191.352 229.076 173.202 1 28.53 ? C7 FAD 601 A 1 
HETATM 34 C C7M FAD . . . M 5 192.06 229.96 174.196 1 28.53 ? C7M FAD 601 A 1 
HETATM 35 C C8 FAD . . . M 5 192.062 228.434 172.174 1 28.53 ? C8 FAD 601 A 1 
HETATM 36 C C8M FAD . . . M 5 193.551 228.609 172.035 1 28.53 ? C8M FAD 601 A 1 
HETATM 37 C C9 FAD . . . M 5 191.38 227.623 171.272 1 28.53 ? C9 FAD 601 A 1 
HETATM 38 C C9A FAD . . . M 5 190.006 227.446 171.378 1 28.53 ? C9A FAD 601 A 1 
HETATM 39 N N10 FAD . . . M 5 189.288 226.629 170.481 1 28.53 ? N10 FAD 601 A 1 
HETATM 40 C C10 FAD . . . M 5 187.93 226.471 170.608 1 28.53 ? C10 FAD 601 A 1 
HETATM 41 C C1' FAD . . . M 5 189.975 225.935 169.385 1 28.53 ? C1' FAD 601 A 1 
HETATM 42 C C2' FAD . . . M 5 190.161 224.444 169.643 1 28.53 ? C2' FAD 601 A 1 
HETATM 43 O O2' FAD . . . M 5 189.771 224.118 170.977 1 28.53 ? O2' FAD 601 A 1 
HETATM 44 C C3' FAD . . . M 5 191.632 224.079 169.44 1 28.53 ? C3' FAD 601 A 1 
HETATM 45 O O3' FAD . . . M 5 191.97 224.273 168.071 1 28.53 ? O3' FAD 601 A 1 
HETATM 46 C C4' FAD . . . M 5 191.983 222.645 169.838 1 28.53 ? C4' FAD 601 A 1 
HETATM 47 O O4' FAD . . . M 5 192.722 222.663 171.059 1 28.53 ? O4' FAD 601 A 1 
HETATM 48 C C5' FAD . . . M 5 192.76 221.915 168.763 1 28.53 ? C5' FAD 601 A 1 
HETATM 49 O O5' FAD . . . M 5 193.051 220.577 169.22 1 28.53 ? O5' FAD 601 A 1 
HETATM 50 P P FAD . . . M 5 194.375 219.838 168.795 1 28.53 ? P FAD 601 A 1 
HETATM 51 O O1P FAD . . . M 5 194.42 218.438 169.416 1 28.53 -1 O1P FAD 601 A 1 
HETATM 52 O O2P FAD . . . M 5 194.532 219.874 167.322 1 28.53 ? O2P FAD 601 A 1 
HETATM 53 O O3P FAD . . . M 5 195.506 220.71 169.481 1 28.53 ? O3P FAD 601 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#