data_7JZ2
#
_model_server_result.job_id            aLwR2Z2SrKNEDyI6bVOEuw 
_model_server_result.datetime_utc      '2024-11-04 22:46:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7jz2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":601}' 
#
_entry.id    7JZ2 
#
_exptl.entry_id    7JZ2 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 M N N 
? 5 U N N 
? 5 CA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O MET 356 A MET 356 1_555 N NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc2 A O GLY 358 A GLY 358 1_555 N NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc3 A O GLU 388 A GLU 388 1_555 N NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc4 B OD1 ASP 63 B ASP 63 1_555 O FE1 FES . B FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc5 B N ILE 209 B ILE 209 1_555 Q FE3 F3S . B F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc6 C NE2 HIS 84 C HIS 84 1_555 S FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? 
metalc ? metalc7 D NE2 HIS 71 D HIS 71 1_555 S FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
metalc ? metalc8 E O MET 356 E MET 356 1_555 V NA NA . E NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? 
metalc ? metalc9 E O GLY 358 E GLY 358 1_555 V NA NA . E NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc10 E O GLU 388 E GLU 388 1_555 V NA NA . E NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc11 F OD1 ASP 63 F ASP 63 1_555 W FE1 FES . F FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc12 F N ILE 209 F ILE 209 1_555 Y FE3 F3S . F F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc13 G NE2 HIS 84 G HIS 84 1_555 Z FE HEM . G HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? 
metalc ? metalc14 I O MET 356 I MET 356 1_555 DA NA NA . I NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc15 I O GLY 358 I GLY 358 1_555 DA NA NA . I NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc16 I O GLU 388 I GLU 388 1_555 DA NA NA . I NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc17 J OD1 ASP 63 J ASP 63 1_555 EA FE1 FES . J FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
metalc ? metalc18 J N ILE 209 J ILE 209 1_555 GA FE3 F3S . J F3S 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc19 K NE2 HIS 84 K HIS 84 1_555 HA FE HEM . K HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? 
metalc ? metalc20 HA FE HEM . K HEM 201 1_555 L NE2 HIS 71 L HIS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 224 n n 
PA O2A FAD sing 225 n n 
PA O5B FAD sing 226 n n 
PA O3P FAD sing 227 n n 
O2A HOA2 FAD sing 228 n n 
O5B C5B FAD sing 229 n n 
C5B C4B FAD sing 230 n n 
C5B H51A FAD sing 231 n n 
C5B H52A FAD sing 232 n n 
C4B O4B FAD sing 233 n n 
C4B C3B FAD sing 234 n n 
C4B H4B FAD sing 235 n n 
O4B C1B FAD sing 236 n n 
C3B O3B FAD sing 237 n n 
C3B C2B FAD sing 238 n n 
C3B H3B FAD sing 239 n n 
O3B HO3A FAD sing 240 n n 
C2B O2B FAD sing 241 n n 
C2B C1B FAD sing 242 n n 
C2B H2B FAD sing 243 n n 
O2B HO2A FAD sing 244 n n 
C1B N9A FAD sing 245 n n 
C1B H1B FAD sing 246 n n 
N9A C8A FAD sing 247 n y 
N9A C4A FAD sing 248 n y 
C8A N7A FAD doub 249 n y 
C8A H8A FAD sing 250 n n 
N7A C5A FAD sing 251 n y 
C5A C6A FAD sing 252 n y 
C5A C4A FAD doub 253 n y 
C6A N6A FAD sing 254 n n 
C6A N1A FAD doub 255 n y 
N6A H61A FAD sing 256 n n 
N6A H62A FAD sing 257 n n 
N1A C2A FAD sing 258 n y 
C2A N3A FAD doub 259 n y 
C2A H2A FAD sing 260 n n 
N3A C4A FAD sing 261 n y 
N1 C2 FAD sing 262 n n 
N1 C10 FAD doub 263 n n 
C2 O2 FAD doub 264 n n 
C2 N3 FAD sing 265 n n 
N3 C4 FAD sing 266 n n 
N3 HN3 FAD sing 267 n n 
C4 O4 FAD doub 268 n n 
C4 C4X FAD sing 269 n n 
C4X N5 FAD doub 270 n n 
C4X C10 FAD sing 271 n n 
N5 C5X FAD sing 272 n n 
C5X C6 FAD doub 273 n y 
C5X C9A FAD sing 274 n y 
C6 C7 FAD sing 275 n y 
C6 H6 FAD sing 276 n n 
C7 C7M FAD sing 277 n n 
C7 C8 FAD doub 278 n y 
C7M HM71 FAD sing 279 n n 
C7M HM72 FAD sing 280 n n 
C7M HM73 FAD sing 281 n n 
C8 C8M FAD sing 282 n n 
C8 C9 FAD sing 283 n y 
C8M HM81 FAD sing 284 n n 
C8M HM82 FAD sing 285 n n 
C8M HM83 FAD sing 286 n n 
C9 C9A FAD doub 287 n y 
C9 H9 FAD sing 288 n n 
C9A N10 FAD sing 289 n n 
N10 C10 FAD sing 290 n n 
N10 C1' FAD sing 291 n n 
C1' C2' FAD sing 292 n n 
C1' "H1'1" FAD sing 293 n n 
C1' "H1'2" FAD sing 294 n n 
C2' O2' FAD sing 295 n n 
C2' C3' FAD sing 296 n n 
C2' H2' FAD sing 297 n n 
O2' HO2' FAD sing 298 n n 
C3' O3' FAD sing 299 n n 
C3' C4' FAD sing 300 n n 
C3' H3' FAD sing 301 n n 
O3' HO3' FAD sing 302 n n 
C4' O4' FAD sing 303 n n 
C4' C5' FAD sing 304 n n 
C4' H4' FAD sing 305 n n 
O4' HO4' FAD sing 306 n n 
C5' O5' FAD sing 307 n n 
C5' "H5'1" FAD sing 308 n n 
C5' "H5'2" FAD sing 309 n n 
O5' P FAD sing 310 n n 
P O1P FAD doub 311 n n 
P O2P FAD sing 312 n n 
P O3P FAD sing 313 n n 
O2P HOP2 FAD sing 314 n n 
#
_atom_sites.entry_id                     7JZ2 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 5 FAD A 1 601 601 FAD FAD . 
N 6 NA A 1 602 1590 NA NA . 
O 7 FES B 1 301 302 FES FES . 
P 8 SF4 B 1 302 303 SF4 SF4 . 
Q 9 F3S B 1 303 304 F3S F3S . 
R 10 3PE C 1 1301 1301 3PE 3PE . 
S 11 HEM D 1 201 1129 HEM HEM . 
T 12 UQ2 D 1 202 1201 UQ2 UQ2 . 
U 5 FAD E 1 601 601 FAD FAD . 
V 6 NA E 1 602 1590 NA NA . 
W 7 FES F 1 301 302 FES FES . 
X 8 SF4 F 1 302 303 SF4 SF4 . 
Y 9 F3S F 1 303 304 F3S F3S . 
Z 11 HEM G 1 201 1129 HEM HEM . 
AA 10 3PE G 1 202 1301 3PE 3PE . 
BA 12 UQ2 H 1 1201 1201 UQ2 UQ2 . 
CA 5 FAD I 1 601 601 FAD FAD . 
DA 6 NA I 1 602 1590 NA NA . 
EA 7 FES J 1 301 302 FES FES . 
FA 8 SF4 J 1 302 303 SF4 SF4 . 
GA 9 F3S J 1 303 304 F3S F3S . 
HA 11 HEM K 1 201 1129 HEM HEM . 
IA 10 3PE K 1 202 1301 3PE 3PE . 
JA 12 UQ2 L 1 1201 1201 UQ2 UQ2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . U 5 158.202 179.663 170.8 1 28.4 ? PA FAD 601 E 1 
HETATM 2 O O1A FAD . . . U 5 156.805 179.86 171.254 1 28.4 -1 O1A FAD 601 E 1 
HETATM 3 O O2A FAD . . . U 5 159.125 179.004 171.828 1 28.4 ? O2A FAD 601 E 1 
HETATM 4 O O5B FAD . . . U 5 158.826 181.032 170.327 1 28.4 ? O5B FAD 601 E 1 
HETATM 5 C C5B FAD . . . U 5 158.022 182.226 170.232 1 28.4 ? C5B FAD 601 E 1 
HETATM 6 C C4B FAD . . . U 5 158.544 183.275 171.181 1 28.4 ? C4B FAD 601 E 1 
HETATM 7 O O4B FAD . . . U 5 158.32 184.589 170.618 1 28.4 ? O4B FAD 601 E 1 
HETATM 8 C C3B FAD . . . U 5 157.88 183.291 172.554 1 28.4 ? C3B FAD 601 E 1 
HETATM 9 O O3B FAD . . . U 5 158.806 183.675 173.564 1 28.4 ? O3B FAD 601 E 1 
HETATM 10 C C2B FAD . . . U 5 156.77 184.328 172.373 1 28.4 ? C2B FAD 601 E 1 
HETATM 11 O O2B FAD . . . U 5 156.4 184.937 173.604 1 28.4 ? O2B FAD 601 E 1 
HETATM 12 C C1B FAD . . . U 5 157.463 185.338 171.46 1 28.4 ? C1B FAD 601 E 1 
HETATM 13 N N9A FAD . . . U 5 156.549 186.113 170.624 1 28.4 ? N9A FAD 601 E 1 
HETATM 14 C C8A FAD . . . U 5 155.464 185.646 169.932 1 28.4 ? C8A FAD 601 E 1 
HETATM 15 N N7A FAD . . . U 5 154.816 186.57 169.264 1 28.4 ? N7A FAD 601 E 1 
HETATM 16 C C5A FAD . . . U 5 155.525 187.73 169.539 1 28.4 ? C5A FAD 601 E 1 
HETATM 17 C C6A FAD . . . U 5 155.352 189.067 169.132 1 28.4 ? C6A FAD 601 E 1 
HETATM 18 N N6A FAD . . . U 5 154.369 189.479 168.327 1 28.4 ? N6A FAD 601 E 1 
HETATM 19 N N1A FAD . . . U 5 156.238 189.981 169.589 1 28.4 ? N1A FAD 601 E 1 
HETATM 20 C C2A FAD . . . U 5 157.223 189.575 170.394 1 28.4 ? C2A FAD 601 E 1 
HETATM 21 N N3A FAD . . . U 5 157.486 188.346 170.843 1 28.4 ? N3A FAD 601 E 1 
HETATM 22 C C4A FAD . . . U 5 156.595 187.463 170.377 1 28.4 ? C4A FAD 601 E 1 
HETATM 23 N N1 FAD . . . U 5 157.971 169.174 169.747 1 28.4 ? N1 FAD 601 E 1 
HETATM 24 C C2 FAD . . . U 5 158.776 168.079 169.88 1 28.4 ? C2 FAD 601 E 1 
HETATM 25 O O2 FAD . . . U 5 159.714 167.866 169.105 1 28.4 ? O2 FAD 601 E 1 
HETATM 26 N N3 FAD . . . U 5 158.544 167.178 170.905 1 28.4 ? N3 FAD 601 E 1 
HETATM 27 C C4 FAD . . . U 5 157.545 167.265 171.852 1 28.4 ? C4 FAD 601 E 1 
HETATM 28 O O4 FAD . . . U 5 157.436 166.399 172.719 1 28.4 ? O4 FAD 601 E 1 
HETATM 29 C C4X FAD . . . U 5 156.696 168.43 171.703 1 28.4 ? C4X FAD 601 E 1 
HETATM 30 N N5 FAD . . . U 5 155.724 168.594 172.557 1 28.4 ? N5 FAD 601 E 1 
HETATM 31 C C5X FAD . . . U 5 154.913 169.709 172.413 1 28.4 ? C5X FAD 601 E 1 
HETATM 32 C C6 FAD . . . U 5 153.868 169.901 173.315 1 28.4 ? C6 FAD 601 E 1 
HETATM 33 C C7 FAD . . . U 5 153.027 171.004 173.212 1 28.4 ? C7 FAD 601 E 1 
HETATM 34 C C7M FAD . . . U 5 151.909 171.179 174.206 1 28.4 ? C7M FAD 601 E 1 
HETATM 35 C C8 FAD . . . U 5 153.233 171.94 172.185 1 28.4 ? C8 FAD 601 E 1 
HETATM 36 C C8M FAD . . . U 5 152.341 173.145 172.045 1 28.4 ? C8M FAD 601 E 1 
HETATM 37 C C9 FAD . . . U 5 154.275 171.751 171.282 1 28.4 ? C9 FAD 601 E 1 
HETATM 38 C C9A FAD . . . U 5 155.112 170.647 171.389 1 28.4 ? C9A FAD 601 E 1 
HETATM 39 N N10 FAD . . . U 5 156.177 170.43 170.491 1 28.4 ? N10 FAD 601 E 1 
HETATM 40 C C10 FAD . . . U 5 156.989 169.33 170.618 1 28.4 ? C10 FAD 601 E 1 
HETATM 41 C C1' FAD . . . U 5 156.439 171.371 169.395 1 28.4 ? C1' FAD 601 E 1 
HETATM 42 C C2' FAD . . . U 5 157.64 172.273 169.654 1 28.4 ? C2' FAD 601 E 1 
HETATM 43 O O2' FAD . . . U 5 158.116 172.097 170.988 1 28.4 ? O2' FAD 601 E 1 
HETATM 44 C C3' FAD . . . U 5 157.225 173.731 169.451 1 28.4 ? C3' FAD 601 E 1 
HETATM 45 O O3' FAD . . . U 5 156.889 173.929 168.082 1 28.4 ? O3' FAD 601 E 1 
HETATM 46 C C4' FAD . . . U 5 158.296 174.748 169.849 1 28.4 ? C4' FAD 601 E 1 
HETATM 47 O O4' FAD . . . U 5 157.913 175.38 171.071 1 28.4 ? O4' FAD 601 E 1 
HETATM 48 C C5' FAD . . . U 5 158.544 175.785 168.775 1 28.4 ? C5' FAD 601 E 1 
HETATM 49 O O5' FAD . . . U 5 159.559 176.703 169.232 1 28.4 ? O5' FAD 601 E 1 
HETATM 50 P P FAD . . . U 5 159.543 178.219 168.807 1 28.4 ? P FAD 601 E 1 
HETATM 51 O O1P FAD . . . U 5 160.736 178.953 169.429 1 28.4 -1 O1P FAD 601 E 1 
HETATM 52 O O2P FAD . . . U 5 159.434 178.337 167.335 1 28.4 ? O2P FAD 601 E 1 
HETATM 53 O O3P FAD . . . U 5 158.225 178.767 169.493 1 28.4 ? O3P FAD 601 E 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           53 
#