data_7K09 # _model_server_result.job_id vOQ9k1iGF9x9UJzFPdA3mg _model_server_result.datetime_utc '2024-11-12 21:12:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k09 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 7K09 # _exptl.entry_id 7K09 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K09 _cell.length_a 149.074 _cell.length_b 73.63 _cell.length_c 106.242 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K09 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M 1 1 B,H,N 2 1 C,I,O 3 1 D,J,P 4 1 E,K,Q 5 1 F,L,R 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 7K09 _atom_sites.fract_transf_matrix[1][1] 0.006708 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013581 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ACO A 1 301 201 ACO ACO . H 2 ACO B 1 301 201 ACO ACO . I 2 ACO C 1 301 201 ACO ACO . J 2 ACO D 1 301 201 ACO ACO . K 2 ACO E 1 301 201 ACO ACO . L 2 ACO F 1 301 201 ACO ACO . M 3 HOH A 1 401 23 HOH HOH . M 3 HOH A 2 402 22 HOH HOH . M 3 HOH A 3 403 2 HOH HOH . M 3 HOH A 4 404 24 HOH HOH . N 3 HOH B 1 401 15 HOH HOH . N 3 HOH B 2 402 4 HOH HOH . N 3 HOH B 3 403 18 HOH HOH . O 3 HOH C 1 401 6 HOH HOH . O 3 HOH C 2 402 5 HOH HOH . O 3 HOH C 3 403 10 HOH HOH . P 3 HOH D 1 401 16 HOH HOH . P 3 HOH D 2 402 19 HOH HOH . P 3 HOH D 3 403 17 HOH HOH . P 3 HOH D 4 404 20 HOH HOH . Q 3 HOH E 1 401 12 HOH HOH . Q 3 HOH E 2 402 8 HOH HOH . Q 3 HOH E 3 403 11 HOH HOH . Q 3 HOH E 4 404 21 HOH HOH . Q 3 HOH E 5 405 9 HOH HOH . Q 3 HOH E 6 406 14 HOH HOH . R 3 HOH F 1 401 3 HOH HOH . R 3 HOH F 2 402 7 HOH HOH . R 3 HOH F 3 403 1 HOH HOH . R 3 HOH F 4 404 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . G 2 9.905 9.717 21.804 1 36.43 ? N1A ACO 301 A 1 HETATM 2 C C2A ACO . . . G 2 8.644 9.314 22.002 1 36.25 ? C2A ACO 301 A 1 HETATM 3 N N3A ACO . . . G 2 7.878 9.461 23.085 1 36.14 ? N3A ACO 301 A 1 HETATM 4 C C4A ACO . . . G 2 8.548 10.107 24.093 1 35.66 ? C4A ACO 301 A 1 HETATM 5 C C5A ACO . . . G 2 9.867 10.555 23.985 1 35.41 ? C5A ACO 301 A 1 HETATM 6 C C6A ACO . . . G 2 10.557 10.327 22.826 1 35.95 ? C6A ACO 301 A 1 HETATM 7 N N6A ACO . . . G 2 11.84 10.665 22.646 1 36 ? N6A ACO 301 A 1 HETATM 8 N N7A ACO . . . G 2 10.163 11.228 25.188 1 35.04 ? N7A ACO 301 A 1 HETATM 9 C C8A ACO . . . G 2 9.113 11.156 25.907 1 34.93 ? C8A ACO 301 A 1 HETATM 10 N N9A ACO . . . G 2 8.048 10.472 25.307 1 34.37 ? N9A ACO 301 A 1 HETATM 11 C C1B ACO . . . G 2 6.756 10.33 25.933 1 34.08 ? C1B ACO 301 A 1 HETATM 12 C C2B ACO . . . G 2 5.605 9.917 24.996 1 33.53 ? C2B ACO 301 A 1 HETATM 13 O O2B ACO . . . G 2 4.46 10.739 25.244 1 32.52 ? O2B ACO 301 A 1 HETATM 14 C C3B ACO . . . G 2 5.464 8.441 25.368 1 35.25 ? C3B ACO 301 A 1 HETATM 15 O O3B ACO . . . G 2 4.122 7.953 25.183 1 38.5 ? O3B ACO 301 A 1 HETATM 16 P P3B ACO . . . G 2 3.515 7.817 23.703 1 39.66 ? P3B ACO 301 A 1 HETATM 17 O O7A ACO . . . G 2 4.466 7.044 22.748 1 42.35 ? O7A ACO 301 A 1 HETATM 18 O O8A ACO . . . G 2 2.134 7.107 23.931 1 40.99 ? O8A ACO 301 A 1 HETATM 19 O O9A ACO . . . G 2 3.21 9.294 23.204 1 40.99 ? O9A ACO 301 A 1 HETATM 20 C C4B ACO . . . G 2 5.737 8.432 26.861 1 34.66 ? C4B ACO 301 A 1 HETATM 21 O O4B ACO . . . G 2 6.834 9.368 26.982 1 33.73 ? O4B ACO 301 A 1 HETATM 22 C C5B ACO . . . G 2 6.115 7.061 27.373 1 35.31 ? C5B ACO 301 A 1 HETATM 23 O O5B ACO . . . G 2 6.036 6.967 28.824 1 37.13 ? O5B ACO 301 A 1 HETATM 24 P P1A ACO . . . G 2 7.295 6.271 29.672 1 37.59 ? P1A ACO 301 A 1 HETATM 25 O O1A ACO . . . G 2 7.562 4.943 29.095 1 38.64 ? O1A ACO 301 A 1 HETATM 26 O O2A ACO . . . G 2 7.065 6.372 31.103 1 38.25 ? O2A ACO 301 A 1 HETATM 27 O O3A ACO . . . G 2 8.421 7.35 29.36 1 38.34 ? O3A ACO 301 A 1 HETATM 28 P P2A ACO . . . G 2 9.998 7.265 29.199 1 36.87 ? P2A ACO 301 A 1 HETATM 29 O O4A ACO . . . G 2 10.606 6.108 29.966 1 38.29 ? O4A ACO 301 A 1 HETATM 30 O O5A ACO . . . G 2 10.338 7.298 27.717 1 36.82 ? O5A ACO 301 A 1 HETATM 31 O O6A ACO . . . G 2 10.419 8.704 29.808 1 35.5 ? O6A ACO 301 A 1 HETATM 32 C CBP ACO . . . G 2 11.33 10.854 29.159 1 30.93 ? CBP ACO 301 A 1 HETATM 33 C CCP ACO . . . G 2 10.088 9.973 29.216 1 33.33 ? CCP ACO 301 A 1 HETATM 34 C CDP ACO . . . G 2 11.892 11.001 30.577 1 30.76 ? CDP ACO 301 A 1 HETATM 35 C CEP ACO . . . G 2 10.912 12.25 28.696 1 31.31 ? CEP ACO 301 A 1 HETATM 36 C CAP ACO . . . G 2 12.405 10.237 28.227 1 32.22 ? CAP ACO 301 A 1 HETATM 37 O OAP ACO . . . G 2 11.862 9.771 27.001 1 31.02 ? OAP ACO 301 A 1 HETATM 38 C C9P ACO . . . G 2 13.648 11.084 27.96 1 32.77 ? C9P ACO 301 A 1 HETATM 39 O O9P ACO . . . G 2 14.682 10.879 28.59 1 34.54 ? O9P ACO 301 A 1 HETATM 40 N N8P ACO . . . G 2 13.556 12.005 27.003 1 32.1 ? N8P ACO 301 A 1 HETATM 41 C C7P ACO . . . G 2 14.715 12.671 26.429 1 31.21 ? C7P ACO 301 A 1 HETATM 42 C C6P ACO . . . G 2 15.06 13.984 27.117 1 30.98 ? C6P ACO 301 A 1 HETATM 43 C C5P ACO . . . G 2 13.857 14.678 27.7 1 31.21 ? C5P ACO 301 A 1 HETATM 44 O O5P ACO . . . G 2 13.025 15.221 26.988 1 31.97 ? O5P ACO 301 A 1 HETATM 45 N N4P ACO . . . G 2 13.756 14.658 29.02 1 31.31 ? N4P ACO 301 A 1 HETATM 46 C C3P ACO . . . G 2 12.836 15.504 29.759 1 31.19 ? C3P ACO 301 A 1 HETATM 47 C C2P ACO . . . G 2 12.882 16.963 29.349 1 31.93 ? C2P ACO 301 A 1 HETATM 48 S S1P ACO . . . G 2 11.827 17.715 30.609 1 33.17 ? S1P ACO 301 A 1 HETATM 49 C C ACO . . . G 2 12.701 18.656 31.838 1 31.42 ? C ACO 301 A 1 HETATM 50 O O ACO . . . G 2 12.223 18.905 32.912 1 29.88 ? O ACO 301 A 1 HETATM 51 C CH3 ACO . . . G 2 14.121 18.961 31.457 1 30.74 ? CH3 ACO 301 A 1 HETATM 52 H H2A ACO . . . G 2 8.186 8.792 21.161 0 46.99 ? H2A ACO 301 A 1 HETATM 53 H H61A ACO . . . G 2 12.352 10.484 21.792 0 45.65 ? H61A ACO 301 A 1 HETATM 54 H H62A ACO . . . G 2 12.343 11.134 23.387 0 45.15 ? H62A ACO 301 A 1 HETATM 55 H H8A ACO . . . G 2 8.974 11.59 26.901 0 43.4 ? H8A ACO 301 A 1 HETATM 56 H H1B ACO . . . G 2 6.63 11.296 26.419 0 42.73 ? H1B ACO 301 A 1 HETATM 57 H H2B ACO . . . G 2 5.849 9.977 23.937 0 42.99 ? H2B ACO 301 A 1 HETATM 58 H HO2A ACO . . . G 2 3.623 10.399 24.839 0 41.71 ? HO2A ACO 301 A 1 HETATM 59 H H3B ACO . . . G 2 6.136 7.786 24.814 0 45.53 ? H3B ACO 301 A 1 HETATM 60 H HOA8 ACO . . . G 2 1.313 7.649 23.805 0 53.34 ? HOA8 ACO 301 A 1 HETATM 61 H HOA9 ACO . . . G 2 3.715 10.141 23.303 0 52.26 ? HOA9 ACO 301 A 1 HETATM 62 H H4B ACO . . . G 2 4.933 8.872 27.45 0 44.09 ? H4B ACO 301 A 1 HETATM 63 H H51A ACO . . . G 2 7.154 6.865 27.108 0 45.3 ? H51A ACO 301 A 1 HETATM 64 H H52A ACO . . . G 2 5.552 6.26 26.896 0 45.73 ? H52A ACO 301 A 1 HETATM 65 H HOA2 ACO . . . G 2 6.116 6.588 31.238 0 48.29 ? HOA2 ACO 301 A 1 HETATM 66 H HOA5 ACO . . . G 2 11.221 7.279 27.266 0 46.56 ? HOA5 ACO 301 A 1 HETATM 67 H H121 ACO . . . G 2 9.289 10.42 29.808 0 41.3 ? H121 ACO 301 A 1 HETATM 68 H H122 ACO . . . G 2 9.668 9.795 28.227 0 41.65 ? H122 ACO 301 A 1 HETATM 69 H H131 ACO . . . G 2 11.61 10.191 31.248 0 37.93 ? H131 ACO 301 A 1 HETATM 70 H H132 ACO . . . G 2 12.98 11.05 30.61 0 37.76 ? H132 ACO 301 A 1 HETATM 71 H H133 ACO . . . G 2 11.528 11.923 31.029 0 37.63 ? H133 ACO 301 A 1 HETATM 72 H H141 ACO . . . G 2 11.633 13.007 28.989 0 38.3 ? H141 ACO 301 A 1 HETATM 73 H H142 ACO . . . G 2 9.957 12.576 29.103 0 38.47 ? H142 ACO 301 A 1 HETATM 74 H H143 ACO . . . G 2 10.773 12.334 27.622 0 38.65 ? H143 ACO 301 A 1 HETATM 75 H H10 ACO . . . G 2 12.664 9.285 28.679 0 40.15 ? H10 ACO 301 A 1 HETATM 76 H HO1 ACO . . . G 2 11.701 10.539 26.395 0 38.83 ? HO1 ACO 301 A 1 HETATM 77 H HN8 ACO . . . G 2 12.655 12.303 26.65 0 39.63 ? HN8 ACO 301 A 1 HETATM 78 H H71 ACO . . . G 2 14.578 12.86 25.368 0 38.55 ? H71 ACO 301 A 1 HETATM 79 H H72 ACO . . . G 2 15.577 12.01 26.481 0 38.52 ? H72 ACO 301 A 1 HETATM 80 H H61 ACO . . . G 2 15.516 14.671 26.406 0 37.78 ? H61 ACO 301 A 1 HETATM 81 H H62 ACO . . . G 2 15.823 13.822 27.875 0 37.73 ? H62 ACO 301 A 1 HETATM 82 H HN4 ACO . . . G 2 14.348 14.046 29.57 0 37.97 ? HN4 ACO 301 A 1 HETATM 83 H H31 ACO . . . G 2 11.816 15.123 29.734 0 37.75 ? H31 ACO 301 A 1 HETATM 84 H H32 ACO . . . G 2 13.165 15.434 30.795 0 37.58 ? H32 ACO 301 A 1 HETATM 85 H H21 ACO . . . G 2 12.485 17.144 28.351 0 38.47 ? H21 ACO 301 A 1 HETATM 86 H H22 ACO . . . G 2 13.895 17.36 29.368 0 38.34 ? H22 ACO 301 A 1 HETATM 87 H HH31 ACO . . . G 2 14.183 19.303 30.422 0 36.73 ? HH31 ACO 301 A 1 HETATM 88 H HH32 ACO . . . G 2 14.804 18.126 31.609 0 36.75 ? HH32 ACO 301 A 1 HETATM 89 H HH33 ACO . . . G 2 14.465 19.802 32.06 0 36.67 ? HH33 ACO 301 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 89 #