data_7K09 # _model_server_result.job_id cRaF1_ruK52WVYdosfTJAQ _model_server_result.datetime_utc '2024-11-12 21:12:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k09 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 7K09 # _exptl.entry_id 7K09 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K09 _cell.length_a 149.074 _cell.length_b 73.63 _cell.length_c 106.242 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K09 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M 1 1 B,H,N 2 1 C,I,O 3 1 D,J,P 4 1 E,K,Q 5 1 F,L,R 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 7K09 _atom_sites.fract_transf_matrix[1][1] 0.006708 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013581 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ACO A 1 301 201 ACO ACO . H 2 ACO B 1 301 201 ACO ACO . I 2 ACO C 1 301 201 ACO ACO . J 2 ACO D 1 301 201 ACO ACO . K 2 ACO E 1 301 201 ACO ACO . L 2 ACO F 1 301 201 ACO ACO . M 3 HOH A 1 401 23 HOH HOH . M 3 HOH A 2 402 22 HOH HOH . M 3 HOH A 3 403 2 HOH HOH . M 3 HOH A 4 404 24 HOH HOH . N 3 HOH B 1 401 15 HOH HOH . N 3 HOH B 2 402 4 HOH HOH . N 3 HOH B 3 403 18 HOH HOH . O 3 HOH C 1 401 6 HOH HOH . O 3 HOH C 2 402 5 HOH HOH . O 3 HOH C 3 403 10 HOH HOH . P 3 HOH D 1 401 16 HOH HOH . P 3 HOH D 2 402 19 HOH HOH . P 3 HOH D 3 403 17 HOH HOH . P 3 HOH D 4 404 20 HOH HOH . Q 3 HOH E 1 401 12 HOH HOH . Q 3 HOH E 2 402 8 HOH HOH . Q 3 HOH E 3 403 11 HOH HOH . Q 3 HOH E 4 404 21 HOH HOH . Q 3 HOH E 5 405 9 HOH HOH . Q 3 HOH E 6 406 14 HOH HOH . R 3 HOH F 1 401 3 HOH HOH . R 3 HOH F 2 402 7 HOH HOH . R 3 HOH F 3 403 1 HOH HOH . R 3 HOH F 4 404 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . J 2 50.578 22.318 27.887 1 34.57 ? N1A ACO 301 D 1 HETATM 2 C C2A ACO . . . J 2 51.772 22.171 28.466 1 34.19 ? C2A ACO 301 D 1 HETATM 3 N N3A ACO . . . J 2 52.549 23.091 29.051 1 33.55 ? N3A ACO 301 D 1 HETATM 4 C C4A ACO . . . J 2 51.969 24.292 29.023 1 33.57 ? C4A ACO 301 D 1 HETATM 5 C C5A ACO . . . J 2 50.742 24.599 28.46 1 33.68 ? C5A ACO 301 D 1 HETATM 6 C C6A ACO . . . J 2 50.024 23.545 27.858 1 34.36 ? C6A ACO 301 D 1 HETATM 7 N N6A ACO . . . J 2 48.851 23.698 27.251 1 34.19 ? N6A ACO 301 D 1 HETATM 8 N N7A ACO . . . J 2 50.422 25.945 28.638 1 33.29 ? N7A ACO 301 D 1 HETATM 9 C C8A ACO . . . J 2 51.461 26.399 29.305 1 32.9 ? C8A ACO 301 D 1 HETATM 10 N N9A ACO . . . J 2 52.416 25.474 29.574 1 32.35 ? N9A ACO 301 D 1 HETATM 11 C C1B ACO . . . J 2 53.632 25.723 30.361 1 32.08 ? C1B ACO 301 D 1 HETATM 12 C C2B ACO . . . J 2 54.647 26.581 29.606 1 31.41 ? C2B ACO 301 D 1 HETATM 13 O O2B ACO . . . J 2 55.985 26.403 30.079 1 30.79 ? O2B ACO 301 D 1 HETATM 14 C C3B ACO . . . J 2 54.101 27.968 29.928 1 32.75 ? C3B ACO 301 D 1 HETATM 15 O O3B ACO . . . J 2 55.096 29.001 29.792 1 35.87 ? O3B ACO 301 D 1 HETATM 16 P P3B ACO . . . J 2 55.103 29.911 28.413 1 36.98 ? P3B ACO 301 D 1 HETATM 17 O O7A ACO . . . J 2 53.69 30.603 28.261 1 39.24 ? O7A ACO 301 D 1 HETATM 18 O O8A ACO . . . J 2 56.278 30.908 28.526 1 37.77 ? O8A ACO 301 D 1 HETATM 19 O O9A ACO . . . J 2 55.461 28.873 27.285 1 37.83 ? O9A ACO 301 D 1 HETATM 20 C C4B ACO . . . J 2 53.667 27.845 31.383 1 32.32 ? C4B ACO 301 D 1 HETATM 21 O O4B ACO . . . J 2 53.246 26.466 31.514 1 31.75 ? O4B ACO 301 D 1 HETATM 22 C C5B ACO . . . J 2 52.561 28.794 31.783 1 31.95 ? C5B ACO 301 D 1 HETATM 23 O O5B ACO . . . J 2 52.406 28.807 33.22 1 32.54 ? O5B ACO 301 D 1 HETATM 24 P P1A ACO . . . J 2 50.887 28.799 33.854 1 32.47 ? P1A ACO 301 D 1 HETATM 25 O O1A ACO . . . J 2 50.114 29.887 33.209 1 32.99 ? O1A ACO 301 D 1 HETATM 26 O O2A ACO . . . J 2 50.881 28.668 35.331 1 33.01 ? O2A ACO 301 D 1 HETATM 27 O O3A ACO . . . J 2 50.481 27.345 33.366 1 32.71 ? O3A ACO 301 D 1 HETATM 28 P P2A ACO . . . J 2 49.113 26.542 33.38 1 31.02 ? P2A ACO 301 D 1 HETATM 29 O O4A ACO . . . J 2 48.043 27.183 34.184 1 31.18 ? O4A ACO 301 D 1 HETATM 30 O O5A ACO . . . J 2 48.74 26.35 31.908 1 30.71 ? O5A ACO 301 D 1 HETATM 31 O O6A ACO . . . J 2 49.549 25.109 33.952 1 30.5 ? O6A ACO 301 D 1 HETATM 32 C CBP ACO . . . J 2 50.132 22.9 33.129 1 29.14 ? CBP ACO 301 D 1 HETATM 33 C CCP ACO . . . J 2 50.578 24.349 33.29 1 30.03 ? CCP ACO 301 D 1 HETATM 34 C CDP ACO . . . J 2 49.882 22.325 34.53 1 29.15 ? CDP ACO 301 D 1 HETATM 35 C CEP ACO . . . J 2 51.274 22.128 32.47 1 29.37 ? CEP ACO 301 D 1 HETATM 36 C CAP ACO . . . J 2 48.847 22.765 32.271 1 30.09 ? CAP ACO 301 D 1 HETATM 37 O OAP ACO . . . J 2 49.022 23.542 31.109 1 30.2 ? OAP ACO 301 D 1 HETATM 38 C C9P ACO . . . J 2 48.381 21.372 31.861 1 29.64 ? C9P ACO 301 D 1 HETATM 39 O O9P ACO . . . J 2 47.498 20.803 32.501 1 29.75 ? O9P ACO 301 D 1 HETATM 40 N N8P ACO . . . J 2 48.965 20.836 30.781 1 29.57 ? N8P ACO 301 D 1 HETATM 41 C C7P ACO . . . J 2 48.74 19.459 30.358 1 29.54 ? C7P ACO 301 D 1 HETATM 42 C C6P ACO . . . J 2 48.866 18.464 31.497 1 30.25 ? C6P ACO 301 D 1 HETATM 43 C C5P ACO . . . J 2 50.299 18.227 31.902 1 30.77 ? C5P ACO 301 D 1 HETATM 44 O O5P ACO . . . J 2 51.198 18.166 31.074 1 31.37 ? O5P ACO 301 D 1 HETATM 45 N N4P ACO . . . J 2 50.507 18.07 33.203 1 31.25 ? N4P ACO 301 D 1 HETATM 46 C C3P ACO . . . J 2 51.182 16.922 33.792 1 32.5 ? C3P ACO 301 D 1 HETATM 47 C C2P ACO . . . J 2 52.693 16.975 33.731 1 34.38 ? C2P ACO 301 D 1 HETATM 48 S S1P ACO . . . J 2 53.481 16.649 35.33 1 37.33 ? S1P ACO 301 D 1 HETATM 49 C C ACO . . . J 2 52.909 15.295 36.327 1 36.27 ? C ACO 301 D 1 HETATM 50 O O ACO . . . J 2 53.286 15.132 37.451 1 36.17 ? O ACO 301 D 1 HETATM 51 C CH3 ACO . . . J 2 51.9 14.423 35.639 1 35.14 ? CH3 ACO 301 D 1 HETATM 52 H H2A ACO . . . J 2 52.155 21.156 28.452 0 41.57 ? H2A ACO 301 D 1 HETATM 53 H H61A ACO . . . J 2 48.327 22.943 26.824 0 41.78 ? H61A ACO 301 D 1 HETATM 54 H H62A ACO . . . J 2 48.41 24.612 27.233 0 42.04 ? H62A ACO 301 D 1 HETATM 55 H H8A ACO . . . J 2 51.483 27.446 29.623 0 41.05 ? H8A ACO 301 D 1 HETATM 56 H H1B ACO . . . J 2 54.063 24.784 30.699 0 39.61 ? H1B ACO 301 D 1 HETATM 57 H H2B ACO . . . J 2 54.58 26.401 28.533 0 39.41 ? H2B ACO 301 D 1 HETATM 58 H HO2A ACO . . . J 2 56.528 25.863 29.444 0 38.67 ? HO2A ACO 301 D 1 HETATM 59 H H3B ACO . . . J 2 53.272 28.236 29.278 0 41.25 ? H3B ACO 301 D 1 HETATM 60 H HOA8 ACO . . . J 2 57.185 30.512 28.519 0 48.45 ? HOA8 ACO 301 D 1 HETATM 61 H HOA9 ACO . . . J 2 55.548 29.004 26.306 0 48.15 ? HOA9 ACO 301 D 1 HETATM 62 H H4B ACO . . . J 2 54.499 27.917 32.08 0 40.52 ? H4B ACO 301 D 1 HETATM 63 H H51A ACO . . . J 2 51.608 28.459 31.379 0 40.02 ? H51A ACO 301 D 1 HETATM 64 H H52A ACO . . . J 2 52.704 29.794 31.382 0 40.45 ? H52A ACO 301 D 1 HETATM 65 H HOA2 ACO . . . J 2 51.555 29.208 35.796 0 41.17 ? HOA2 ACO 301 D 1 HETATM 66 H HOA5 ACO . . . J 2 48.017 25.809 31.5 0 37.75 ? HOA5 ACO 301 D 1 HETATM 67 H H121 ACO . . . J 2 51.492 24.455 33.874 0 36.68 ? H121 ACO 301 D 1 HETATM 68 H H122 ACO . . . J 2 50.829 24.79 32.326 0 36.8 ? H122 ACO 301 D 1 HETATM 69 H H131 ACO . . . J 2 49.213 22.918 35.155 0 35.24 ? H131 ACO 301 D 1 HETATM 70 H H132 ACO . . . J 2 49.498 21.307 34.504 0 35.05 ? H132 ACO 301 D 1 HETATM 71 H H133 ACO . . . J 2 50.841 22.297 35.047 0 35.2 ? H133 ACO 301 D 1 HETATM 72 H H141 ACO . . . J 2 51.285 21.076 32.747 0 35.43 ? H141 ACO 301 D 1 HETATM 73 H H142 ACO . . . J 2 52.254 22.514 32.744 0 35.69 ? H142 ACO 301 D 1 HETATM 74 H H143 ACO . . . J 2 51.267 22.183 31.383 0 35.67 ? H143 ACO 301 D 1 HETATM 75 H H10 ACO . . . J 2 48.065 23.314 32.787 0 36.5 ? H10 ACO 301 D 1 HETATM 76 H HO1 ACO . . . J 2 49.173 24.503 31.281 0 36.95 ? HO1 ACO 301 D 1 HETATM 77 H HN8 ACO . . . J 2 49.612 21.385 30.222 0 35.79 ? HN8 ACO 301 D 1 HETATM 78 H H71 ACO . . . J 2 49.415 19.174 29.553 0 35.53 ? H71 ACO 301 D 1 HETATM 79 H H72 ACO . . . J 2 47.744 19.348 29.936 0 35.48 ? H72 ACO 301 D 1 HETATM 80 H H61 ACO . . . J 2 48.387 17.512 31.27 0 36.12 ? H61 ACO 301 D 1 HETATM 81 H H62 ACO . . . J 2 48.324 18.835 32.365 0 36.17 ? H62 ACO 301 D 1 HETATM 82 H HN4 ACO . . . J 2 50.218 18.796 33.847 0 37.34 ? HN4 ACO 301 D 1 HETATM 83 H H31 ACO . . . J 2 50.842 16.84 34.823 0 38.68 ? H31 ACO 301 D 1 HETATM 84 H H32 ACO . . . J 2 50.83 16.019 33.298 0 38.69 ? H32 ACO 301 D 1 HETATM 85 H H21 ACO . . . J 2 53.005 17.975 33.434 0 41.15 ? H21 ACO 301 D 1 HETATM 86 H H22 ACO . . . J 2 53.099 16.332 32.955 0 41.06 ? H22 ACO 301 D 1 HETATM 87 H HH31 ACO . . . J 2 52.12 14.292 34.58 0 41.79 ? HH31 ACO 301 D 1 HETATM 88 H HH32 ACO . . . J 2 50.877 14.771 35.786 0 41.75 ? HH32 ACO 301 D 1 HETATM 89 H HH33 ACO . . . J 2 51.97 13.428 36.079 0 41.74 ? HH33 ACO 301 D 1 # _model_server_stats.io_time_ms 142 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 89 #