data_7K0S # _model_server_result.job_id MKSTCB5jsQJojOqxTv4Sog _model_server_result.datetime_utc '2024-12-01 23:17:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":5103}' # _entry.id 7K0S # _exptl.entry_id 7K0S _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K0S _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 K N N ? 4 N N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4876 A CYS 4876 1_555 A SG CYS 4882 A CYS 4882 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 4876 B CYS 4876 1_555 B SG CYS 4882 B CYS 4882 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 C SG CYS 4876 D CYS 4876 1_555 C SG CYS 4882 D CYS 4882 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 D SG CYS 4876 C CYS 4876 1_555 D SG CYS 4882 C CYS 4882 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A SG CYS 4958 A CYS 4958 1_555 F ZN ZN . A ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc2 A SG CYS 4961 A CYS 4961 1_555 F ZN ZN . A ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc3 A NE2 HIS 4978 A HIS 4978 1_555 F ZN ZN . A ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc4 A NE2 HIS 4983 A HIS 4983 1_555 F ZN ZN . A ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc5 E O2G ACP . A ACP 5101 1_555 N MG MG . D MG 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc6 E O2B ACP . A ACP 5101 1_555 N MG MG . D MG 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc7 B SG CYS 4958 B CYS 4958 1_555 I ZN ZN . B ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc8 B SG CYS 4961 B CYS 4961 1_555 I ZN ZN . B ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc9 B NE2 HIS 4978 B HIS 4978 1_555 I ZN ZN . B ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc10 B NE2 HIS 4983 B HIS 4983 1_555 I ZN ZN . B ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc11 H O1G ACP . B ACP 5101 1_555 J MG MG . B MG 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc12 H O3G ACP . B ACP 5101 1_555 J MG MG . B MG 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc13 H O2B ACP . B ACP 5101 1_555 J MG MG . B MG 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc14 K MG MG . B MG 5104 1_555 O O2B ACP . C ACP 5101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc15 K MG MG . B MG 5104 1_555 O O2G ACP . C ACP 5101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc16 C SG CYS 4958 D CYS 4958 1_555 M ZN ZN . D ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc17 C N CYS 4961 D CYS 4961 1_555 M ZN ZN . D ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc18 C SG CYS 4961 D CYS 4961 1_555 M ZN ZN . D ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc19 C NE2 HIS 4983 D HIS 4983 1_555 M ZN ZN . D ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc20 L O2G ACP . D ACP 5101 1_555 Q MG MG . C MG 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc21 L O2B ACP . D ACP 5101 1_555 Q MG MG . C MG 5103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc22 D SG CYS 4958 C CYS 4958 1_555 P ZN ZN . C ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc23 D SG CYS 4961 C CYS 4961 1_555 P ZN ZN . C ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc24 D NE2 HIS 4978 C HIS 4978 1_555 P ZN ZN . C ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc25 D NE2 HIS 4983 C HIS 4983 1_555 P ZN ZN . C ZN 5102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7K0S _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ACP A 1 5101 5101 ACP ACP . F 3 ZN A 1 5102 5102 ZN ZN . G 4 MG A 1 5103 5 MG MG . H 2 ACP B 1 5101 5101 ACP ACP . I 3 ZN B 1 5102 5102 ZN ZN . J 4 MG B 1 5103 2 MG MG . K 4 MG B 1 5104 3 MG MG . L 2 ACP D 1 5101 5101 ACP ACP . M 3 ZN D 1 5102 5102 ZN ZN . N 4 MG D 1 5103 1 MG MG . O 2 ACP C 1 5101 5101 ACP ACP . P 3 ZN C 1 5102 5102 ZN ZN . Q 4 MG C 1 5103 4 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 4 _atom_site.Cartn_x 248.186 _atom_site.Cartn_y 216.54 _atom_site.Cartn_z 285.347 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 5103 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 264 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 460 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #