data_7K0W # _model_server_result.job_id 2n0-C2Et37ubvTGoQ1vM0Q _model_server_result.datetime_utc '2024-11-12 21:35:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k0w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7K0W # _exptl.entry_id 7K0W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Baloxavir acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K0W _cell.length_a 89.718 _cell.length_b 89.718 _cell.length_c 133.763 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 61 A HIS 41 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc2 A OE1 GLU 81 A GLU 80 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc3 A OD2 ASP 109 A ASP 108 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc4 A OD1 ASP 109 A ASP 108 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc5 A OE1 GLU 120 A GLU 119 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc6 A O ILE 121 A ILE 120 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc7 B O1 E4Z . A E4Z 201 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc8 B O2 E4Z . A E4Z 201 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc9 B O2 E4Z . A E4Z 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc10 B O3 E4Z . A E4Z 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.91 ? metalc ? metalc11 D MN MN . A MN 203 1_555 G O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc12 D MN MN . A MN 203 1_555 G O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? # _chem_comp.formula 'C24 H19 F2 N3 O4 S' _chem_comp.formula_weight 483.487 _chem_comp.id E4Z _chem_comp.mon_nstd_flag . _chem_comp.name 'Baloxavir acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 O4 E4Z sing 83 n n C9 C10 E4Z sing 84 n n O4 C8 E4Z sing 85 n n C10 N3 E4Z sing 86 n n C8 C7 E4Z sing 87 n n O3 C6 E4Z doub 88 n n N3 C6 E4Z sing 89 n n N3 C7 E4Z sing 90 n n C6 C4 E4Z sing 91 n n C7 N2 E4Z sing 92 n n O2 C5 E4Z sing 93 n n C4 C5 E4Z doub 94 n n C4 N1 E4Z sing 95 n n C5 C1 E4Z sing 96 n n N2 N1 E4Z sing 97 n n N2 C11 E4Z sing 98 n n N1 C3 E4Z sing 99 n n C1 O1 E4Z doub 100 n n C1 C2 E4Z sing 101 n n C3 C2 E4Z doub 102 n n C11 C12 E4Z sing 103 n n C11 C16 E4Z sing 104 n n C21 C22 E4Z doub 105 n y C21 C12 E4Z sing 106 n y C22 C23 E4Z sing 107 n y C12 C13 E4Z doub 108 n y C23 F2 E4Z sing 109 n n C23 C24 E4Z doub 110 n y C13 C24 E4Z sing 111 n y C13 C14 E4Z sing 112 n n C24 F1 E4Z sing 113 n n C14 S3 E4Z sing 114 n n C16 C20 E4Z doub 115 n y C16 C15 E4Z sing 116 n y C20 C19 E4Z sing 117 n y S3 C15 E4Z sing 118 n n C15 C17 E4Z doub 119 n y C19 C18 E4Z doub 120 n y C17 C18 E4Z sing 121 n y C2 H1 E4Z sing 122 n n C7 H3 E4Z sing 123 n n C14 H4 E4Z sing 124 n n C14 H5 E4Z sing 125 n n C17 H6 E4Z sing 126 n n C18 H7 E4Z sing 127 n n C19 H8 E4Z sing 128 n n C20 H9 E4Z sing 129 n n C21 H10 E4Z sing 130 n n C22 H11 E4Z sing 131 n n C11 H12 E4Z sing 132 n n C8 H13 E4Z sing 133 n n C8 H14 E4Z sing 134 n n C9 H15 E4Z sing 135 n n C9 H16 E4Z sing 136 n n C10 H17 E4Z sing 137 n n C10 H18 E4Z sing 138 n n C3 H19 E4Z sing 139 n n O2 H20 E4Z sing 140 n n # _atom_sites.entry_id 7K0W _atom_sites.fract_transf_matrix[1][1] 0.011146 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 E4Z A 1 201 201 E4Z E4Z . C 3 MN A 1 202 301 MN MN . D 3 MN A 1 203 302 MN MN . E 4 SO4 A 1 204 1 SO4 SO4 . F 4 SO4 A 1 205 2 SO4 SO4 . G 5 HOH A 1 301 2 HOH HOH . G 5 HOH A 2 302 1 HOH HOH . G 5 HOH A 3 303 12 HOH HOH . G 5 HOH A 4 304 5 HOH HOH . G 5 HOH A 5 305 22 HOH HOH . G 5 HOH A 6 306 6 HOH HOH . G 5 HOH A 7 307 11 HOH HOH . G 5 HOH A 8 308 7 HOH HOH . G 5 HOH A 9 309 19 HOH HOH . G 5 HOH A 10 310 20 HOH HOH . G 5 HOH A 11 311 16 HOH HOH . G 5 HOH A 12 312 21 HOH HOH . G 5 HOH A 13 313 18 HOH HOH . G 5 HOH A 14 314 24 HOH HOH . G 5 HOH A 15 315 9 HOH HOH . G 5 HOH A 16 316 8 HOH HOH . G 5 HOH A 17 317 3 HOH HOH . G 5 HOH A 18 318 4 HOH HOH . G 5 HOH A 19 319 15 HOH HOH . G 5 HOH A 20 320 25 HOH HOH . G 5 HOH A 21 321 10 HOH HOH . G 5 HOH A 22 322 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 E4Z . . . B 2 29.363 -5.6 18.213 1 41.55 ? C1 E4Z 201 A 1 HETATM 2 N N1 E4Z . . . B 2 30.768 -4.809 15.908 1 42.55 ? N1 E4Z 201 A 1 HETATM 3 O O1 E4Z . . . B 2 28.74 -5.954 19.256 1 40.28 ? O1 E4Z 201 A 1 HETATM 4 C C2 E4Z . . . B 2 30.29 -6.491 17.596 1 46.16 ? C2 E4Z 201 A 1 HETATM 5 O O2 E4Z . . . B 2 28.265 -3.451 18.204 1 44.54 ? O2 E4Z 201 A 1 HETATM 6 O O3 E4Z . . . B 2 28.829 -1.8 16.309 1 42.29 ? O3 E4Z 201 A 1 HETATM 7 C C4 E4Z . . . B 2 29.829 -3.923 16.464 1 39.72 ? C4 E4Z 201 A 1 HETATM 8 O O4 E4Z . . . B 2 33.21 -1.213 15.147 1 45.19 ? O4 E4Z 201 A 1 HETATM 9 C C5 E4Z . . . B 2 29.132 -4.299 17.627 1 36.81 ? C5 E4Z 201 A 1 HETATM 10 C C6 E4Z . . . B 2 29.654 -2.589 15.863 1 39.24 ? C6 E4Z 201 A 1 HETATM 11 C C7 E4Z . . . B 2 31.736 -2.969 14.473 1 41.45 ? C7 E4Z 201 A 1 HETATM 12 C C13 E4Z . . . B 2 32.174 -5.404 11.752 1 48.47 ? C13 E4Z 201 A 1 HETATM 13 C C14 E4Z . . . B 2 32.997 -6.143 12.77 1 41.61 ? C14 E4Z 201 A 1 HETATM 14 C C15 E4Z . . . B 2 30.532 -7.511 13.677 1 43.22 ? C15 E4Z 201 A 1 HETATM 15 C C16 E4Z . . . B 2 29.849 -6.3 13.883 1 38.82 ? C16 E4Z 201 A 1 HETATM 16 C C17 E4Z . . . B 2 29.901 -8.714 13.995 1 38.63 ? C17 E4Z 201 A 1 HETATM 17 C C18 E4Z . . . B 2 28.619 -8.725 14.503 1 40.46 ? C18 E4Z 201 A 1 HETATM 18 C C19 E4Z . . . B 2 27.953 -7.541 14.713 1 39.89 ? C19 E4Z 201 A 1 HETATM 19 C C20 E4Z . . . B 2 28.561 -6.339 14.41 1 41.46 ? C20 E4Z 201 A 1 HETATM 20 C C21 E4Z . . . B 2 30.196 -4.147 11.201 1 50.86 ? C21 E4Z 201 A 1 HETATM 21 C C22 E4Z . . . B 2 30.608 -4.052 9.88 1 47.71 ? C22 E4Z 201 A 1 HETATM 22 C C23 E4Z . . . B 2 31.791 -4.637 9.507 1 52.6 ? C23 E4Z 201 A 1 HETATM 23 C C24 E4Z . . . B 2 32.564 -5.31 10.429 1 52.42 ? C24 E4Z 201 A 1 HETATM 24 F F2 E4Z . . . B 2 32.217 -4.559 8.224 1 54.84 ? F2 E4Z 201 A 1 HETATM 25 C C12 E4Z . . . B 2 30.973 -4.802 12.15 1 46.03 ? C12 E4Z 201 A 1 HETATM 26 F F1 E4Z . . . B 2 33.716 -5.872 10.037 1 57.68 ? F1 E4Z 201 A 1 HETATM 27 S S3 E4Z . . . B 2 32.171 -7.729 13.037 1 44.56 ? S3 E4Z 201 A 1 HETATM 28 C C11 E4Z . . . B 2 30.468 -4.938 13.579 1 43.36 ? C11 E4Z 201 A 1 HETATM 29 N N2 E4Z . . . B 2 31.198 -4.295 14.687 1 42.44 ? N2 E4Z 201 A 1 HETATM 30 C C8 E4Z . . . B 2 32.914 -2.598 15.337 1 41.32 ? C8 E4Z 201 A 1 HETATM 31 C C9 E4Z . . . B 2 32.108 -0.399 15.556 1 36.66 ? C9 E4Z 201 A 1 HETATM 32 C C10 E4Z . . . B 2 30.862 -0.741 14.776 1 43.83 ? C10 E4Z 201 A 1 HETATM 33 N N3 E4Z . . . B 2 30.577 -2.175 14.904 1 40.84 ? N3 E4Z 201 A 1 HETATM 34 C C3 E4Z . . . B 2 30.976 -6.091 16.45 1 32.36 ? C3 E4Z 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 34 #