data_7K14
#
_model_server_result.job_id            vPxl24Crqi9YWft70y4krg 
_model_server_result.datetime_utc      '2024-11-01 17:21:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7k14 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":401}' 
#
_entry.id    7K14 
#
_exptl.entry_id    7K14 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          119.049 
_cell.angle_gamma         90 
_cell.entry_id            7K14 
_cell.length_a            94 
_cell.length_b            211.93 
_cell.length_c            94.35 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7K14 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,N,O,P,X,Y,Z,AA 1 1 
E,F,G,H,Q,R,S,T,U,V,W,BA,CA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
? 2 T N N 
? 2 V N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 91 n n 
N1 C10 FMN doub 92 n n 
C2 O2 FMN doub 93 n n 
C2 N3 FMN sing 94 n n 
N3 C4 FMN sing 95 n n 
N3 HN3 FMN sing 96 n n 
C4 O4 FMN doub 97 n n 
C4 C4A FMN sing 98 n n 
C4A N5 FMN doub 99 n n 
C4A C10 FMN sing 100 n n 
N5 C5A FMN sing 101 n n 
C5A C6 FMN doub 102 n y 
C5A C9A FMN sing 103 n y 
C6 C7 FMN sing 104 n y 
C6 H6 FMN sing 105 n n 
C7 C7M FMN sing 106 n n 
C7 C8 FMN doub 107 n y 
C7M HM71 FMN sing 108 n n 
C7M HM72 FMN sing 109 n n 
C7M HM73 FMN sing 110 n n 
C8 C8M FMN sing 111 n n 
C8 C9 FMN sing 112 n y 
C8M HM81 FMN sing 113 n n 
C8M HM82 FMN sing 114 n n 
C8M HM83 FMN sing 115 n n 
C9 C9A FMN doub 116 n y 
C9 H9 FMN sing 117 n n 
C9A N10 FMN sing 118 n n 
N10 C10 FMN sing 119 n n 
N10 C1' FMN sing 120 n n 
C1' C2' FMN sing 121 n n 
C1' "H1'1" FMN sing 122 n n 
C1' "H1'2" FMN sing 123 n n 
C2' O2' FMN sing 124 n n 
C2' C3' FMN sing 125 n n 
C2' H2' FMN sing 126 n n 
O2' HO2' FMN sing 127 n n 
C3' O3' FMN sing 128 n n 
C3' C4' FMN sing 129 n n 
C3' H3' FMN sing 130 n n 
O3' HO3' FMN sing 131 n n 
C4' O4' FMN sing 132 n n 
C4' C5' FMN sing 133 n n 
C4' H4' FMN sing 134 n n 
O4' HO4' FMN sing 135 n n 
C5' O5' FMN sing 136 n n 
C5' "H5'1" FMN sing 137 n n 
C5' "H5'2" FMN sing 138 n n 
O5' P FMN sing 139 n n 
P O1P FMN doub 140 n n 
P O2P FMN sing 141 n n 
P O3P FMN sing 142 n n 
O2P HOP2 FMN sing 143 n n 
O3P HOP3 FMN sing 144 n n 
#
_atom_sites.entry_id                     7K14 
_atom_sites.fract_transf_matrix[1][1]    0.010638 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005909 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004719 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012124 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 FMN A 1 401 401 FMN FMN . 
J 3 03S A 1 402 501 03S 03S . 
K 2 FMN B 1 401 401 FMN FMN . 
L 3 03S B 1 402 501 03S 03S . 
M 2 FMN C 1 401 401 FMN FMN . 
N 3 03S C 1 402 501 03S 03S . 
O 2 FMN D 1 401 401 FMN FMN . 
P 3 03S D 1 402 501 03S 03S . 
Q 2 FMN E 1 401 401 FMN FMN . 
R 3 03S E 1 402 501 03S 03S . 
S 4 PO4 F 1 401 401 PO4 PO4 . 
T 2 FMN G 1 401 401 FMN FMN . 
U 5 CL G 1 402 501 CL CL . 
V 2 FMN H 1 401 401 FMN FMN . 
W 5 CL H 1 402 501 CL CL . 
X 6 HOH A 1 501 14 HOH HOH . 
X 6 HOH A 2 502 11 HOH HOH . 
X 6 HOH A 3 503 1 HOH HOH . 
Y 6 HOH B 1 501 9 HOH HOH . 
Y 6 HOH B 2 502 6 HOH HOH . 
Y 6 HOH B 3 503 13 HOH HOH . 
Y 6 HOH B 4 504 8 HOH HOH . 
Y 6 HOH B 5 505 5 HOH HOH . 
Z 6 HOH C 1 501 15 HOH HOH . 
AA 6 HOH D 1 501 3 HOH HOH . 
AA 6 HOH D 2 502 4 HOH HOH . 
AA 6 HOH D 3 503 7 HOH HOH . 
BA 6 HOH E 1 501 12 HOH HOH . 
CA 6 HOH F 1 501 10 HOH HOH . 
CA 6 HOH F 2 502 2 HOH HOH . 
CA 6 HOH F 3 503 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . Q 2 -17.526 -38.425 -14.852 0.92 67.63 ? N1 FMN 401 E 1 
HETATM 2 C C2 FMN . . . Q 2 -17.853 -39.615 -15.363 0.92 67.97 ? C2 FMN 401 E 1 
HETATM 3 O O2 FMN . . . Q 2 -16.963 -40.353 -15.761 0.92 69.91 ? O2 FMN 401 E 1 
HETATM 4 N N3 FMN . . . Q 2 -19.109 -40.077 -15.445 0.92 68.68 ? N3 FMN 401 E 1 
HETATM 5 C C4 FMN . . . Q 2 -20.154 -39.363 -14.976 0.92 68.04 ? C4 FMN 401 E 1 
HETATM 6 O O4 FMN . . . Q 2 -21.289 -39.776 -15.078 0.92 68.8 ? O4 FMN 401 E 1 
HETATM 7 C C4A FMN . . . Q 2 -19.863 -38.048 -14.37 0.92 66.05 ? C4A FMN 401 E 1 
HETATM 8 N N5 FMN . . . Q 2 -20.806 -37.294 -13.871 0.92 64.24 ? N5 FMN 401 E 1 
HETATM 9 C C5A FMN . . . Q 2 -20.502 -36.108 -13.339 0.92 64.55 ? C5A FMN 401 E 1 
HETATM 10 C C6 FMN . . . Q 2 -21.527 -35.337 -12.766 0.92 62.04 ? C6 FMN 401 E 1 
HETATM 11 C C7 FMN . . . Q 2 -21.226 -34.167 -12.15 0.92 63.54 ? C7 FMN 401 E 1 
HETATM 12 C C7M FMN . . . Q 2 -22.331 -33.401 -11.474 0.92 62.02 ? C7M FMN 401 E 1 
HETATM 13 C C8 FMN . . . Q 2 -19.907 -33.704 -12.1 0.92 66.67 ? C8 FMN 401 E 1 
HETATM 14 C C8M FMN . . . Q 2 -19.577 -32.432 -11.36 0.92 66.05 ? C8M FMN 401 E 1 
HETATM 15 C C9 FMN . . . Q 2 -18.884 -34.421 -12.683 0.92 68.11 ? C9 FMN 401 E 1 
HETATM 16 C C9A FMN . . . Q 2 -19.162 -35.64 -13.304 0.92 67.63 ? C9A FMN 401 E 1 
HETATM 17 N N10 FMN . . . Q 2 -18.135 -36.411 -13.835 0.92 68.68 ? N10 FMN 401 E 1 
HETATM 18 C C10 FMN . . . Q 2 -18.449 -37.62 -14.358 0.92 68.13 ? C10 FMN 401 E 1 
HETATM 19 C C1' FMN . . . Q 2 -16.743 -35.955 -13.862 0.92 69.02 ? C1' FMN 401 E 1 
HETATM 20 C C2' FMN . . . Q 2 -16.377 -35.127 -15.106 0.92 71.08 ? C2' FMN 401 E 1 
HETATM 21 O O2' FMN . . . Q 2 -17.422 -35.212 -16.069 0.92 70.36 ? O2' FMN 401 E 1 
HETATM 22 C C3' FMN . . . Q 2 -15.118 -35.624 -15.835 0.92 72.46 ? C3' FMN 401 E 1 
HETATM 23 O O3' FMN . . . Q 2 -15.265 -37.015 -16.133 0.92 73.59 ? O3' FMN 401 E 1 
HETATM 24 C C4' FMN . . . Q 2 -13.809 -35.379 -15.07 0.92 74.25 ? C4' FMN 401 E 1 
HETATM 25 O O4' FMN . . . Q 2 -13.818 -36.027 -13.793 0.92 74.78 ? O4' FMN 401 E 1 
HETATM 26 C C5' FMN . . . Q 2 -13.533 -33.88 -14.894 0.92 72.84 ? C5' FMN 401 E 1 
HETATM 27 O O5' FMN . . . Q 2 -12.122 -33.679 -14.728 0.92 72.66 ? O5' FMN 401 E 1 
HETATM 28 P P FMN . . . Q 2 -11.471 -32.279 -14.285 0.92 69.98 ? P FMN 401 E 1 
HETATM 29 O O1P FMN . . . Q 2 -10.001 -32.444 -14.173 0.92 72.4 ? O1P FMN 401 E 1 
HETATM 30 O O2P FMN . . . Q 2 -12.128 -31.751 -12.916 0.92 71.32 ? O2P FMN 401 E 1 
HETATM 31 O O3P FMN . . . Q 2 -11.75 -31.196 -15.426 0.92 69.41 ? O3P FMN 401 E 1 
#
_model_server_stats.io_time_ms              78 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#