data_7K14 # _model_server_result.job_id e042A3jUGzcKaZ7BoYJD9w _model_server_result.datetime_utc '2024-11-23 04:27:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k14 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":401}' # _entry.id 7K14 # _exptl.entry_id 7K14 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 119.049 _cell.angle_gamma 90 _cell.entry_id 7K14 _cell.length_a 94 _cell.length_b 211.93 _cell.length_c 94.35 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K14 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P,X,Y,Z,AA 1 1 E,F,G,H,Q,R,S,T,U,V,W,BA,CA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 K N N ? 2 M N N ? 2 O N N ? 2 Q N N ? 2 T N N ? 2 V N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 91 n n N1 C10 FMN doub 92 n n C2 O2 FMN doub 93 n n C2 N3 FMN sing 94 n n N3 C4 FMN sing 95 n n N3 HN3 FMN sing 96 n n C4 O4 FMN doub 97 n n C4 C4A FMN sing 98 n n C4A N5 FMN doub 99 n n C4A C10 FMN sing 100 n n N5 C5A FMN sing 101 n n C5A C6 FMN doub 102 n y C5A C9A FMN sing 103 n y C6 C7 FMN sing 104 n y C6 H6 FMN sing 105 n n C7 C7M FMN sing 106 n n C7 C8 FMN doub 107 n y C7M HM71 FMN sing 108 n n C7M HM72 FMN sing 109 n n C7M HM73 FMN sing 110 n n C8 C8M FMN sing 111 n n C8 C9 FMN sing 112 n y C8M HM81 FMN sing 113 n n C8M HM82 FMN sing 114 n n C8M HM83 FMN sing 115 n n C9 C9A FMN doub 116 n y C9 H9 FMN sing 117 n n C9A N10 FMN sing 118 n n N10 C10 FMN sing 119 n n N10 C1' FMN sing 120 n n C1' C2' FMN sing 121 n n C1' "H1'1" FMN sing 122 n n C1' "H1'2" FMN sing 123 n n C2' O2' FMN sing 124 n n C2' C3' FMN sing 125 n n C2' H2' FMN sing 126 n n O2' HO2' FMN sing 127 n n C3' O3' FMN sing 128 n n C3' C4' FMN sing 129 n n C3' H3' FMN sing 130 n n O3' HO3' FMN sing 131 n n C4' O4' FMN sing 132 n n C4' C5' FMN sing 133 n n C4' H4' FMN sing 134 n n O4' HO4' FMN sing 135 n n C5' O5' FMN sing 136 n n C5' "H5'1" FMN sing 137 n n C5' "H5'2" FMN sing 138 n n O5' P FMN sing 139 n n P O1P FMN doub 140 n n P O2P FMN sing 141 n n P O3P FMN sing 142 n n O2P HOP2 FMN sing 143 n n O3P HOP3 FMN sing 144 n n # _atom_sites.entry_id 7K14 _atom_sites.fract_transf_matrix[1][1] 0.010638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005909 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 FMN A 1 401 401 FMN FMN . J 3 03S A 1 402 501 03S 03S . K 2 FMN B 1 401 401 FMN FMN . L 3 03S B 1 402 501 03S 03S . M 2 FMN C 1 401 401 FMN FMN . N 3 03S C 1 402 501 03S 03S . O 2 FMN D 1 401 401 FMN FMN . P 3 03S D 1 402 501 03S 03S . Q 2 FMN E 1 401 401 FMN FMN . R 3 03S E 1 402 501 03S 03S . S 4 PO4 F 1 401 401 PO4 PO4 . T 2 FMN G 1 401 401 FMN FMN . U 5 CL G 1 402 501 CL CL . V 2 FMN H 1 401 401 FMN FMN . W 5 CL H 1 402 501 CL CL . X 6 HOH A 1 501 14 HOH HOH . X 6 HOH A 2 502 11 HOH HOH . X 6 HOH A 3 503 1 HOH HOH . Y 6 HOH B 1 501 9 HOH HOH . Y 6 HOH B 2 502 6 HOH HOH . Y 6 HOH B 3 503 13 HOH HOH . Y 6 HOH B 4 504 8 HOH HOH . Y 6 HOH B 5 505 5 HOH HOH . Z 6 HOH C 1 501 15 HOH HOH . AA 6 HOH D 1 501 3 HOH HOH . AA 6 HOH D 2 502 4 HOH HOH . AA 6 HOH D 3 503 7 HOH HOH . BA 6 HOH E 1 501 12 HOH HOH . CA 6 HOH F 1 501 10 HOH HOH . CA 6 HOH F 2 502 2 HOH HOH . CA 6 HOH F 3 503 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . V 2 -65.198 -57.085 4.229 0.77 102.13 ? N1 FMN 401 H 1 HETATM 2 C C2 FMN . . . V 2 -65.298 -56.011 3.444 0.77 102.67 ? C2 FMN 401 H 1 HETATM 3 O O2 FMN . . . V 2 -66.29 -55.306 3.536 0.77 105.1 ? O2 FMN 401 H 1 HETATM 4 N N3 FMN . . . V 2 -64.373 -55.653 2.547 0.77 101.58 ? N3 FMN 401 H 1 HETATM 5 C C4 FMN . . . V 2 -63.243 -56.379 2.376 0.77 99.93 ? C4 FMN 401 H 1 HETATM 6 O O4 FMN . . . V 2 -62.419 -56.046 1.545 0.77 97.5 ? O4 FMN 401 H 1 HETATM 7 C C4A FMN . . . V 2 -63.071 -57.586 3.226 0.77 100.69 ? C4A FMN 401 H 1 HETATM 8 N N5 FMN . . . V 2 -62.002 -58.344 3.169 0.77 99.52 ? N5 FMN 401 H 1 HETATM 9 C C5A FMN . . . V 2 -61.864 -59.394 3.993 0.77 100.75 ? C5A FMN 401 H 1 HETATM 10 C C6 FMN . . . V 2 -60.65 -60.106 3.994 0.77 99.23 ? C6 FMN 401 H 1 HETATM 11 C C7 FMN . . . V 2 -60.44 -61.098 4.904 0.77 100.17 ? C7 FMN 401 H 1 HETATM 12 C C7M FMN . . . V 2 -59.1 -61.789 4.927 0.77 93.99 ? C7M FMN 401 H 1 HETATM 13 C C8 FMN . . . V 2 -61.432 -61.445 5.822 0.77 100.88 ? C8 FMN 401 H 1 HETATM 14 C C8M FMN . . . V 2 -61.162 -62.518 6.844 0.77 96.58 ? C8M FMN 401 H 1 HETATM 15 C C9 FMN . . . V 2 -62.645 -60.787 5.825 0.77 102.64 ? C9 FMN 401 H 1 HETATM 16 C C9A FMN . . . V 2 -62.876 -59.741 4.926 0.77 102.37 ? C9A FMN 401 H 1 HETATM 17 N N10 FMN . . . V 2 -64.034 -58.982 5.001 0.77 102.39 ? N10 FMN 401 H 1 HETATM 18 C C10 FMN . . . V 2 -64.153 -57.895 4.181 0.77 101.61 ? C10 FMN 401 H 1 HETATM 19 C C1' FMN . . . V 2 -65.102 -59.304 5.953 0.77 103.15 ? C1' FMN 401 H 1 HETATM 20 C C2' FMN . . . V 2 -66.114 -60.32 5.399 0.77 102.5 ? C2' FMN 401 H 1 HETATM 21 O O2' FMN . . . V 2 -65.827 -60.634 4.035 0.77 99.38 ? O2' FMN 401 H 1 HETATM 22 C C3' FMN . . . V 2 -67.549 -59.779 5.509 0.77 103.93 ? C3' FMN 401 H 1 HETATM 23 O O3' FMN . . . V 2 -67.576 -58.381 5.196 0.77 104.7 ? O3' FMN 401 H 1 HETATM 24 C C4' FMN . . . V 2 -68.138 -60.003 6.917 0.77 103.8 ? C4' FMN 401 H 1 HETATM 25 O O4' FMN . . . V 2 -67.545 -59.121 7.881 0.77 103.37 ? O4' FMN 401 H 1 HETATM 26 C C5' FMN . . . V 2 -67.966 -61.457 7.371 0.77 101.39 ? C5' FMN 401 H 1 HETATM 27 O O5' FMN . . . V 2 -69.186 -61.884 7.985 0.77 100.28 ? O5' FMN 401 H 1 HETATM 28 P P FMN . . . V 2 -69.249 -62.579 9.434 0.77 97.5 ? P FMN 401 H 1 HETATM 29 O O1P FMN . . . V 2 -67.922 -62.42 10.08 0.77 99.25 ? O1P FMN 401 H 1 HETATM 30 O O2P FMN . . . V 2 -69.634 -64.134 9.258 0.77 98.69 ? O2P FMN 401 H 1 HETATM 31 O O3P FMN . . . V 2 -70.397 -61.898 10.332 0.77 97.33 ? O3P FMN 401 H 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 72 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #