data_7K1H
#
_model_server_result.job_id            goZeUurcRyp3uSY4lzSiEg 
_model_server_result.datetime_utc      '2024-10-19 05:26:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7k1h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":1302}' 
#
_entry.id    7K1H 
#
_exptl.entry_id    7K1H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              499.607 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         118.25 
_cell.angle_beta          87.05 
_cell.angle_gamma         106.71 
_cell.entry_id            7K1H 
_cell.length_a            66.848 
_cell.length_b            88.336 
_cell.length_c            93.841 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7K1H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,J,S,T 1 1 
C,F,K,L,Q,R,U,X 2 1 
D,E,M,N,O,P,V,W 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 H N N 
? 3 J N N 
? 3 L N N 
? 3 N N N 
? 3 P N N 
? 3 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B SG CYS 106 A CYS 797 1_555 J C9 YY3 . A YY3 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? 
covale ? covale2 C SG CYS 106 C CYS 797 1_555 L C9 YY3 . C YY3 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.625 ? 
#
_chem_comp.formula           'C28 H33 N7 O2' 
_chem_comp.formula_weight    499.607 
_chem_comp.id                YY3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Osimertinib;AZD 9291' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 N2 YY3 sing 450 n n 
N2 C11 YY3 sing 451 n n 
N2 C12 YY3 sing 452 n n 
C10 C11 YY3 sing 453 n n 
C10 N1 YY3 sing 454 n n 
C28 N1 YY3 sing 455 n n 
N1 C2 YY3 sing 456 n n 
C14 O1 YY3 sing 457 n n 
C3 C2 YY3 doub 458 n y 
C3 C4 YY3 sing 459 n y 
C2 C1 YY3 sing 460 n y 
O1 C4 YY3 sing 461 n n 
C4 C5 YY3 doub 462 n y 
C1 N YY3 sing 463 n n 
C1 C6 YY3 doub 464 n y 
N C7 YY3 sing 465 n n 
C7 C8 YY3 sing 466 n n 
C7 O YY3 doub 467 n n 
C5 C6 YY3 sing 468 n y 
C5 N3 YY3 sing 469 n n 
C8 C9 YY3 doub 470 n n 
N3 C15 YY3 sing 471 n n 
C15 N5 YY3 doub 472 n y 
C15 N4 YY3 sing 473 n y 
C24 C25 YY3 doub 474 n y 
C24 C23 YY3 sing 475 n y 
N5 C18 YY3 sing 476 n y 
N4 C16 YY3 doub 477 n y 
C25 C26 YY3 sing 478 n y 
C23 C22 YY3 doub 479 n y 
C18 C19 YY3 sing 480 n n 
C18 C17 YY3 doub 481 n y 
C26 C19 YY3 sing 482 n y 
C26 C21 YY3 doub 483 n y 
C16 C17 YY3 sing 484 n y 
C19 C20 YY3 doub 485 n y 
C22 C21 YY3 sing 486 n y 
C21 N6 YY3 sing 487 n y 
C20 N6 YY3 sing 488 n y 
N6 C27 YY3 sing 489 n n 
C13 H1 YY3 sing 490 n n 
C13 H2 YY3 sing 491 n n 
C13 H3 YY3 sing 492 n n 
C12 H5 YY3 sing 493 n n 
C12 H6 YY3 sing 494 n n 
C12 H7 YY3 sing 495 n n 
C11 H8 YY3 sing 496 n n 
C11 H9 YY3 sing 497 n n 
C10 H10 YY3 sing 498 n n 
C10 H11 YY3 sing 499 n n 
C28 H12 YY3 sing 500 n n 
C28 H13 YY3 sing 501 n n 
C28 H14 YY3 sing 502 n n 
C3 H15 YY3 sing 503 n n 
C14 H16 YY3 sing 504 n n 
C14 H17 YY3 sing 505 n n 
C14 H18 YY3 sing 506 n n 
N H19 YY3 sing 507 n n 
C8 H20 YY3 sing 508 n n 
C9 H22 YY3 sing 509 n n 
C9 H23 YY3 sing 510 n n 
C6 H25 YY3 sing 511 n n 
N3 H26 YY3 sing 512 n n 
C16 H27 YY3 sing 513 n n 
C17 H28 YY3 sing 514 n n 
C25 H29 YY3 sing 515 n n 
C24 H30 YY3 sing 516 n n 
C23 H31 YY3 sing 517 n n 
C22 H32 YY3 sing 518 n n 
C27 H33 YY3 sing 519 n n 
C27 H34 YY3 sing 520 n n 
C27 H35 YY3 sing 521 n n 
C20 H36 YY3 sing 522 n n 
#
_atom_sites.entry_id                     7K1H 
_atom_sites.fract_transf_matrix[1][1]    0.014959 
_atom_sites.fract_transf_matrix[1][2]    0.00449 
_atom_sites.fract_transf_matrix[1][3]    0.001573 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011819 
_atom_sites.fract_transf_matrix[2][3]    0.006456 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012158 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 VNS B 1 1301 1301 VNS J63 . 
H 3 YY3 B 1 1302 1401 YY3 YY3 . 
I 2 VNS A 1 1301 1301 VNS J63 . 
J 3 YY3 A 1 1302 1401 YY3 YY3 . 
K 2 VNS C 1 1301 1301 VNS J63 . 
L 3 YY3 C 1 1302 1401 YY3 YY3 . 
M 2 VNS D 1 1301 1301 VNS J63 . 
N 3 YY3 D 1 1302 1401 YY3 YY3 . 
O 2 VNS E 1 1301 1301 VNS J63 . 
P 3 YY3 E 1 1302 1401 YY3 YY3 . 
Q 2 VNS F 1 1301 1301 VNS J63 . 
R 3 YY3 F 1 1302 1401 YY3 YY3 . 
S 4 HOH B 1 1401 3 HOH HOH . 
S 4 HOH B 2 1402 29 HOH HOH . 
S 4 HOH B 3 1403 1 HOH HOH . 
S 4 HOH B 4 1404 34 HOH HOH . 
S 4 HOH B 5 1405 80 HOH HOH . 
S 4 HOH B 6 1406 94 HOH HOH . 
S 4 HOH B 7 1407 6 HOH HOH . 
S 4 HOH B 8 1408 68 HOH HOH . 
S 4 HOH B 9 1409 66 HOH HOH . 
S 4 HOH B 10 1410 108 HOH HOH . 
S 4 HOH B 11 1411 50 HOH HOH . 
S 4 HOH B 12 1412 87 HOH HOH . 
S 4 HOH B 13 1413 83 HOH HOH . 
S 4 HOH B 14 1414 40 HOH HOH . 
S 4 HOH B 15 1415 78 HOH HOH . 
S 4 HOH B 16 1416 5 HOH HOH . 
S 4 HOH B 17 1417 39 HOH HOH . 
T 4 HOH A 1 1401 59 HOH HOH . 
T 4 HOH A 2 1402 69 HOH HOH . 
T 4 HOH A 3 1403 58 HOH HOH . 
T 4 HOH A 4 1404 38 HOH HOH . 
T 4 HOH A 5 1405 101 HOH HOH . 
T 4 HOH A 6 1406 13 HOH HOH . 
T 4 HOH A 7 1407 56 HOH HOH . 
T 4 HOH A 8 1408 44 HOH HOH . 
T 4 HOH A 9 1409 27 HOH HOH . 
T 4 HOH A 10 1410 12 HOH HOH . 
T 4 HOH A 11 1411 85 HOH HOH . 
T 4 HOH A 12 1412 16 HOH HOH . 
T 4 HOH A 13 1413 55 HOH HOH . 
T 4 HOH A 14 1414 105 HOH HOH . 
T 4 HOH A 15 1415 75 HOH HOH . 
T 4 HOH A 16 1416 98 HOH HOH . 
T 4 HOH A 17 1417 92 HOH HOH . 
T 4 HOH A 18 1418 4 HOH HOH . 
T 4 HOH A 19 1419 88 HOH HOH . 
T 4 HOH A 20 1420 104 HOH HOH . 
T 4 HOH A 21 1421 70 HOH HOH . 
T 4 HOH A 22 1422 47 HOH HOH . 
T 4 HOH A 23 1423 89 HOH HOH . 
U 4 HOH C 1 1401 60 HOH HOH . 
U 4 HOH C 2 1402 15 HOH HOH . 
U 4 HOH C 3 1403 62 HOH HOH . 
U 4 HOH C 4 1404 97 HOH HOH . 
U 4 HOH C 5 1405 63 HOH HOH . 
U 4 HOH C 6 1406 9 HOH HOH . 
U 4 HOH C 7 1407 24 HOH HOH . 
U 4 HOH C 8 1408 91 HOH HOH . 
U 4 HOH C 9 1409 8 HOH HOH . 
U 4 HOH C 10 1410 19 HOH HOH . 
U 4 HOH C 11 1411 54 HOH HOH . 
U 4 HOH C 12 1412 96 HOH HOH . 
U 4 HOH C 13 1413 93 HOH HOH . 
U 4 HOH C 14 1414 113 HOH HOH . 
U 4 HOH C 15 1415 41 HOH HOH . 
U 4 HOH C 16 1416 37 HOH HOH . 
V 4 HOH D 1 1401 25 HOH HOH . 
V 4 HOH D 2 1402 84 HOH HOH . 
V 4 HOH D 3 1403 26 HOH HOH . 
V 4 HOH D 4 1404 33 HOH HOH . 
V 4 HOH D 5 1405 11 HOH HOH . 
V 4 HOH D 6 1406 111 HOH HOH . 
V 4 HOH D 7 1407 14 HOH HOH . 
V 4 HOH D 8 1408 110 HOH HOH . 
V 4 HOH D 9 1409 61 HOH HOH . 
V 4 HOH D 10 1410 79 HOH HOH . 
V 4 HOH D 11 1411 18 HOH HOH . 
V 4 HOH D 12 1412 21 HOH HOH . 
V 4 HOH D 13 1413 31 HOH HOH . 
V 4 HOH D 14 1414 10 HOH HOH . 
V 4 HOH D 15 1415 23 HOH HOH . 
V 4 HOH D 16 1416 20 HOH HOH . 
V 4 HOH D 17 1417 103 HOH HOH . 
V 4 HOH D 18 1418 100 HOH HOH . 
V 4 HOH D 19 1419 30 HOH HOH . 
V 4 HOH D 20 1420 49 HOH HOH . 
V 4 HOH D 21 1421 52 HOH HOH . 
V 4 HOH D 22 1422 99 HOH HOH . 
W 4 HOH E 1 1401 82 HOH HOH . 
W 4 HOH E 2 1402 43 HOH HOH . 
W 4 HOH E 3 1403 7 HOH HOH . 
W 4 HOH E 4 1404 76 HOH HOH . 
W 4 HOH E 5 1405 45 HOH HOH . 
W 4 HOH E 6 1406 57 HOH HOH . 
W 4 HOH E 7 1407 51 HOH HOH . 
W 4 HOH E 8 1408 112 HOH HOH . 
W 4 HOH E 9 1409 28 HOH HOH . 
W 4 HOH E 10 1410 72 HOH HOH . 
W 4 HOH E 11 1411 64 HOH HOH . 
W 4 HOH E 12 1412 107 HOH HOH . 
W 4 HOH E 13 1413 90 HOH HOH . 
X 4 HOH F 1 1401 22 HOH HOH . 
X 4 HOH F 2 1402 67 HOH HOH . 
X 4 HOH F 3 1403 36 HOH HOH . 
X 4 HOH F 4 1404 42 HOH HOH . 
X 4 HOH F 5 1405 65 HOH HOH . 
X 4 HOH F 6 1406 2 HOH HOH . 
X 4 HOH F 7 1407 106 HOH HOH . 
X 4 HOH F 8 1408 74 HOH HOH . 
X 4 HOH F 9 1409 48 HOH HOH . 
X 4 HOH F 10 1410 71 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 YY3 . . . N 3 34.96 -22.623 -56.412 1 30 ? C13 YY3 1302 D 1 
HETATM 2 N N2 YY3 . . . N 3 34.227 -23.913 -56.54 1 30 ? N2 YY3 1302 D 1 
HETATM 3 C C12 YY3 . . . N 3 32.954 -23.74 -55.783 1 30 ? C12 YY3 1302 D 1 
HETATM 4 C C11 YY3 . . . N 3 33.981 -24.226 -58.027 1 30 ? C11 YY3 1302 D 1 
HETATM 5 C C10 YY3 . . . N 3 33.203 -25.587 -58.313 1 30 ? C10 YY3 1302 D 1 
HETATM 6 N N1 YY3 . . . N 3 32.121 -25.468 -59.336 1 30 ? N1 YY3 1302 D 1 
HETATM 7 C C28 YY3 . . . N 3 32.547 -25.244 -60.701 1 30 ? C28 YY3 1302 D 1 
HETATM 8 C C3 YY3 . . . N 3 30.102 -24.424 -58.402 1 30 ? C3 YY3 1302 D 1 
HETATM 9 C C4 YY3 . . . N 3 28.754 -24.374 -58.032 1 30 ? C4 YY3 1302 D 1 
HETATM 10 O O1 YY3 . . . N 3 28.246 -23.233 -57.439 1 30 ? O1 YY3 1302 D 1 
HETATM 11 C C14 YY3 . . . N 3 28.993 -22.07 -57.632 1 30 ? C14 YY3 1302 D 1 
HETATM 12 C C2 YY3 . . . N 3 30.723 -25.538 -59.014 1 30 ? C2 YY3 1302 D 1 
HETATM 13 C C1 YY3 . . . N 3 29.877 -26.656 -59.252 1 30 ? C1 YY3 1302 D 1 
HETATM 14 N N YY3 . . . N 3 30.442 -27.877 -59.874 1 30 ? N YY3 1302 D 1 
HETATM 15 C C7 YY3 . . . N 3 29.804 -29.168 -60.141 1 30 ? C7 YY3 1302 D 1 
HETATM 16 O O YY3 . . . N 3 28.693 -29.409 -59.757 1 30 ? O YY3 1302 D 1 
HETATM 17 C C8 YY3 . . . N 3 30.547 -30.353 -60.715 1 30 ? C8 YY3 1302 D 1 
HETATM 18 C C9 YY3 . . . N 3 30.892 -31.301 -59.588 1 30 ? C9 YY3 1302 D 1 
HETATM 19 C C6 YY3 . . . N 3 28.533 -26.539 -58.84 1 30 ? C6 YY3 1302 D 1 
HETATM 20 C C5 YY3 . . . N 3 27.911 -25.415 -58.236 1 30 ? C5 YY3 1302 D 1 
HETATM 21 N N3 YY3 . . . N 3 26.506 -25.354 -57.827 1 30 ? N3 YY3 1302 D 1 
HETATM 22 C C15 YY3 . . . N 3 25.418 -26.118 -58.275 1 30 ? C15 YY3 1302 D 1 
HETATM 23 N N5 YY3 . . . N 3 25.549 -27.057 -59.237 1 30 ? N5 YY3 1302 D 1 
HETATM 24 N N4 YY3 . . . N 3 24.266 -25.837 -57.687 1 30 ? N4 YY3 1302 D 1 
HETATM 25 C C16 YY3 . . . N 3 23.208 -26.518 -58.064 1 30 ? C16 YY3 1302 D 1 
HETATM 26 C C17 YY3 . . . N 3 23.243 -27.505 -59.054 1 30 ? C17 YY3 1302 D 1 
HETATM 27 C C18 YY3 . . . N 3 24.479 -27.721 -59.62 1 30 ? C18 YY3 1302 D 1 
HETATM 28 C C19 YY3 . . . N 3 24.619 -28.737 -60.612 1 30 ? C19 YY3 1302 D 1 
HETATM 29 C C26 YY3 . . . N 3 25.675 -28.978 -61.563 1 30 ? C26 YY3 1302 D 1 
HETATM 30 C C25 YY3 . . . N 3 26.844 -28.303 -61.889 1 30 ? C25 YY3 1302 D 1 
HETATM 31 C C24 YY3 . . . N 3 27.666 -28.775 -62.886 1 30 ? C24 YY3 1302 D 1 
HETATM 32 C C23 YY3 . . . N 3 27.329 -29.928 -63.593 1 30 ? C23 YY3 1302 D 1 
HETATM 33 C C22 YY3 . . . N 3 26.179 -30.601 -63.304 1 30 ? C22 YY3 1302 D 1 
HETATM 34 C C21 YY3 . . . N 3 25.362 -30.115 -62.288 1 30 ? C21 YY3 1302 D 1 
HETATM 35 N N6 YY3 . . . N 3 24.176 -30.564 -61.796 1 30 ? N6 YY3 1302 D 1 
HETATM 36 C C27 YY3 . . . N 3 23.506 -31.734 -62.277 1 30 ? C27 YY3 1302 D 1 
HETATM 37 C C20 YY3 . . . N 3 23.733 -29.781 -60.81 1 30 ? C20 YY3 1302 D 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           345 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           37 
#