data_7K20 # _model_server_result.job_id NkU5IoRx1CAJVENfafSIFQ _model_server_result.datetime_utc '2024-11-24 02:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k20 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":803}' # _entry.id 7K20 # _exptl.entry_id 7K20 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 259.302 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(pyren-1-yl)acetamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K20 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K20 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 M N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 72 A GLU 72 1_555 A N HIC 73 A HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 A C HIC 73 A HIC 73 1_555 A N GLY 74 A GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 A SG CYS 374 A CYS 374 1_555 G C19 1T4 . A 1T4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? covale ? covale4 B C GLU 72 B GLU 72 1_555 B N HIC 73 B HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 B C HIC 73 B HIC 73 1_555 B N GLY 74 B GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale6 B SG CYS 374 B CYS 374 1_555 J C19 1T4 . B 1T4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? covale ? covale7 C C GLU 72 C GLU 72 1_555 C N HIC 73 C HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale8 C C HIC 73 C HIC 73 1_555 C N GLY 74 C GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale9 C SG CYS 374 C CYS 374 1_555 M C19 1T4 . C 1T4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? covale ? covale10 D C GLU 72 D GLU 72 1_555 D N HIC 73 D HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale11 D C HIC 73 D HIC 73 1_555 D N GLY 74 D GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale12 D SG CYS 374 D CYS 374 1_555 P C19 1T4 . D 1T4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc1 E MG MG . A MG 801 1_555 F O1B ADP . A ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.968 ? metalc ? metalc2 E MG MG . A MG 801 1_555 F O2B ADP . A ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc3 H MG MG . B MG 801 1_555 I O1B ADP . B ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc4 K MG MG . C MG 801 1_555 L O1B ADP . C ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc5 K MG MG . C MG 801 1_555 L O2B ADP . C ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc6 N MG MG . D MG 801 1_555 O O1B ADP . D ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? # _chem_comp.formula 'C18 H13 N O' _chem_comp.formula_weight 259.302 _chem_comp.id 1T4 _chem_comp.mon_nstd_flag . _chem_comp.name N-(pyren-1-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7K20 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 801 801 MG MG . F 3 ADP A 1 802 901 ADP ADP . G 4 1T4 A 1 803 401 1T4 1T4 . H 2 MG B 1 801 801 MG MG . I 3 ADP B 1 802 901 ADP ADP . J 4 1T4 B 1 803 401 1T4 1T4 . K 2 MG C 1 801 801 MG MG . L 3 ADP C 1 802 901 ADP ADP . M 4 1T4 C 1 803 401 1T4 1T4 . N 2 MG D 1 801 801 MG MG . O 3 ADP D 1 802 901 ADP ADP . P 4 1T4 D 1 803 401 1T4 1T4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1T4 . . . J 4 196.238 169.957 166.922 1 79 ? C1 1T4 803 B 1 HETATM 2 C C2 1T4 . . . J 4 195.17 170.376 167.776 1 79 ? C2 1T4 803 B 1 HETATM 3 C C3 1T4 . . . J 4 194.534 169.35 168.447 1 79 ? C3 1T4 803 B 1 HETATM 4 C C4 1T4 . . . J 4 194.885 168.027 168.287 1 79 ? C4 1T4 803 B 1 HETATM 5 C C5 1T4 . . . J 4 195.902 167.606 167.471 1 79 ? C5 1T4 803 B 1 HETATM 6 C C6 1T4 . . . J 4 196.602 168.601 166.768 1 79 ? C6 1T4 803 B 1 HETATM 7 C C7 1T4 . . . J 4 197.676 168.196 165.891 1 79 ? C7 1T4 803 B 1 HETATM 8 C C8 1T4 . . . J 4 198.039 166.832 165.739 1 79 ? C8 1T4 803 B 1 HETATM 9 C C9 1T4 . . . J 4 199.082 166.497 164.892 1 79 ? C9 1T4 803 B 1 HETATM 10 C C10 1T4 . . . J 4 199.795 167.434 164.188 1 79 ? C10 1T4 803 B 1 HETATM 11 C C11 1T4 . . . J 4 199.444 168.761 164.333 1 79 ? C11 1T4 803 B 1 HETATM 12 C C12 1T4 . . . J 4 198.404 169.15 165.174 1 79 ? C12 1T4 803 B 1 HETATM 13 C C13 1T4 . . . J 4 198.019 170.488 165.354 1 79 ? C13 1T4 803 B 1 HETATM 14 C C14 1T4 . . . J 4 197.003 170.875 166.172 1 79 ? C14 1T4 803 B 1 HETATM 15 C C15 1T4 . . . J 4 197.302 165.888 166.478 1 79 ? C15 1T4 803 B 1 HETATM 16 C C16 1T4 . . . J 4 196.286 166.254 167.297 1 79 ? C16 1T4 803 B 1 HETATM 17 N N1 1T4 . . . J 4 194.716 171.741 168.029 1 79 ? N1 1T4 803 B 1 HETATM 18 C C17 1T4 . . . J 4 193.432 172.301 168.168 1 79 ? C17 1T4 803 B 1 HETATM 19 O O18 1T4 . . . J 4 192.435 171.595 168.067 1 79 ? O18 1T4 803 B 1 HETATM 20 C C19 1T4 . . . J 4 193.14 173.78 168.44 1 79 ? C19 1T4 803 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 433 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #