data_7K3C # _model_server_result.job_id Nw2gXA2FfzZad51W4d8n6Q _model_server_result.datetime_utc '2024-10-19 00:49:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":102}' # _entry.id 7K3C # _exptl.entry_id 7K3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.096 _cell.angle_gamma 90 _cell.entry_id 7K3C _cell.length_a 8.36 _cell.length_b 51.61 _cell.length_c 9.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 1 2 A,B,C,D,E,F,G 1 3 A,B,C,D,E,F,G 1 4 A,B,C,D,E,F,G 1 5 A,B,C,D,E,F,G 1 6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_554 x,y,z-1 1 0 0 0 1 0 0 0 1 3.117758 0 -9.005581 3 'crystal symmetry operation' 1_556 x,y,z+1 1 0 0 0 1 0 0 0 1 -3.117758 0 9.005581 4 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -8.36 0 0 5 'crystal symmetry operation' 1_454 x-1,y,z-1 1 0 0 0 1 0 0 0 1 -5.242242 0 -9.005581 6 'crystal symmetry operation' 1_456 x-1,y,z+1 1 0 0 0 1 0 0 0 1 -11.477758 0 9.005581 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 60 n n C1 C2 PGE sing 61 n n C1 H1 PGE sing 62 n n C1 H12 PGE sing 63 n n O1 HO1 PGE sing 64 n n C2 O2 PGE sing 65 n n C2 H2 PGE sing 66 n n C2 H22 PGE sing 67 n n O2 C3 PGE sing 68 n n C3 C4 PGE sing 69 n n C3 H3 PGE sing 70 n n C3 H32 PGE sing 71 n n C4 O3 PGE sing 72 n n C4 H4 PGE sing 73 n n C4 H42 PGE sing 74 n n O4 C6 PGE sing 75 n n O4 HO4 PGE sing 76 n n C6 C5 PGE sing 77 n n C6 H6 PGE sing 78 n n C6 H62 PGE sing 79 n n C5 O3 PGE sing 80 n n C5 H5 PGE sing 81 n n C5 H52 PGE sing 82 n n # _atom_sites.entry_id 7K3C _atom_sites.fract_transf_matrix[1][1] 0.119617 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.041412 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.111042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EOH A 1 101 11 EOH EOH . D 2 EOH B 1 101 12 EOH EOH . E 3 PGE B 1 102 13 PGE 15P . F 4 HOH A 1 201 2 HOH HOH . F 4 HOH A 2 202 4 HOH HOH . F 4 HOH A 3 203 1 HOH HOH . G 4 HOH B 1 201 5 HOH HOH . G 4 HOH B 2 202 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . A . E 3 4.757 23.853 -5.137 0.5 28.33 0 C1 PGE 102 B 1 HETATM 2 O O1 PGE . A . E 3 5.468 23.041 -6.064 0.5 29.78 0 O1 PGE 102 B 1 HETATM 3 C C2 PGE . A . E 3 4.494 23.074 -3.881 0.5 28.34 0 C2 PGE 102 B 1 HETATM 4 O O2 PGE . . . E 3 3.909 23.884 -2.858 1 30.94 0 O2 PGE 102 B 1 HETATM 5 C C3 PGE . . . E 3 3.807 23.211 -1.612 1 27.5 0 C3 PGE 102 B 1 HETATM 6 C C4 PGE . . . E 3 2.948 23.993 -0.667 1 26.05 0 C4 PGE 102 B 1 HETATM 7 O O4 PGE . B . E 3 1.568 23.797 3.901 0.5 24.19 0 O4 PGE 102 B 1 HETATM 8 C C6 PGE . B . E 3 2.179 23.121 2.814 0.5 23.12 0 C6 PGE 102 B 1 HETATM 9 C C5 PGE . B . E 3 2.304 24.047 1.645 0.5 23.82 0 C5 PGE 102 B 1 HETATM 10 O O3 PGE . . . E 3 2.898 23.317 0.579 1 26.32 0 O3 PGE 102 B 1 HETATM 11 H H1 PGE . . . E 3 5.288 24.652 -4.93 0.5 0.5 0 H1 PGE 102 B 1 HETATM 12 H H12 PGE . . . E 3 3.906 24.138 -5.536 0.5 28.49 0 H12 PGE 102 B 1 HETATM 13 H H2 PGE . . . E 3 3.89 22.331 -4.093 0.5 28.76 0 H2 PGE 102 B 1 HETATM 14 H H22 PGE . . . E 3 5.343 22.701 -3.56 0.5 28.91 0 H22 PGE 102 B 1 HETATM 15 H H3 PGE . . . E 3 3.418 22.321 -1.752 1 26.79 0 H3 PGE 102 B 1 HETATM 16 H H32 PGE . . . E 3 4.703 23.1 -1.227 1 25.9 0 H32 PGE 102 B 1 HETATM 17 H H4 PGE . . . E 3 3.324 24.891 -0.545 1 25.34 0 H4 PGE 102 B 1 HETATM 18 H H42 PGE . . . E 3 2.043 24.079 -1.037 1 26.31 0 H42 PGE 102 B 1 HETATM 19 H H6 PGE . . . E 3 1.632 22.345 2.563 0.5 23.08 0 H6 PGE 102 B 1 HETATM 20 H H62 PGE . . . E 3 3.068 22.8 3.08 0.5 24.8 0 H62 PGE 102 B 1 HETATM 21 H H5 PGE . . . E 3 2.866 24.815 1.884 0.5 22.02 0 H5 PGE 102 B 1 HETATM 22 H H52 PGE . . . E 3 1.417 24.374 1.379 0.5 24.12 0 H52 PGE 102 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #