data_7K4B
#
_model_server_result.job_id            acVWTqCI1d8ZdsDgmGsPxg 
_model_server_result.datetime_utc      '2024-11-23 01:21:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7k4b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":704}' 
#
_entry.id    7K4B 
#
_exptl.entry_id    7K4B 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              335.486 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-[cis-4-(3-methylphenyl)cyclohexyl]-4-(pyridin-3-yl)piperazine 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7K4B 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7K4B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 Q N N 
? 2 Y N N 
? 2 LA N N 
? 2 OA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 542 A ASP 542 1_555 U CA CA . A CA 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? 
metalc ? metalc2 U CA CA . A CA 717 1_555 B OD1 ASP 542 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? 
metalc ? metalc3 U CA CA . A CA 717 1_555 C OD1 ASP 542 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.099 ? 
metalc ? metalc4 U CA CA . A CA 717 1_555 D OD1 ASP 542 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? 
#
_chem_comp.formula           'C22 H29 N3' 
_chem_comp.formula_weight    335.486 
_chem_comp.id                VUG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-[cis-4-(3-methylphenyl)cyclohexyl]-4-(pyridin-3-yl)piperazine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 VUG doub 512 n y 
C18 N03 VUG sing 513 n y 
C17 C16 VUG sing 514 n y 
N03 C19 VUG doub 515 n y 
C16 C15 VUG doub 516 n y 
C19 C15 VUG sing 517 n y 
C15 N02 VUG sing 518 n n 
N02 C14 VUG sing 519 n n 
N02 C12 VUG sing 520 n n 
C14 C13 VUG sing 521 n n 
C12 C11 VUG sing 522 n n 
C13 N01 VUG sing 523 n n 
C11 N01 VUG sing 524 n n 
N01 C10 VUG sing 525 n n 
C10 C07 VUG sing 526 n n 
C10 C09 VUG sing 527 n n 
C07 C06 VUG sing 528 n n 
C09 C08 VUG sing 529 n n 
C06 C05 VUG sing 530 n n 
C08 C05 VUG sing 531 n n 
C05 C04 VUG sing 532 n n 
C04 C03 VUG doub 533 n y 
C04 C20 VUG sing 534 n y 
C03 C02 VUG sing 535 n y 
C20 C21 VUG doub 536 n y 
C02 C01 VUG sing 537 n n 
C02 C22 VUG doub 538 n y 
C21 C22 VUG sing 539 n y 
C17 H1 VUG sing 540 n n 
C16 H2 VUG sing 541 n n 
C14 H3 VUG sing 542 n n 
C13 H4 VUG sing 543 n n 
C12 H5 VUG sing 544 n n 
C12 H6 VUG sing 545 n n 
C11 H7 VUG sing 546 n n 
C11 H8 VUG sing 547 n n 
C10 H9 VUG sing 548 n n 
C18 H10 VUG sing 549 n n 
C19 H11 VUG sing 550 n n 
C20 H12 VUG sing 551 n n 
C21 H13 VUG sing 552 n n 
C22 H14 VUG sing 553 n n 
C01 H15 VUG sing 554 n n 
C01 H16 VUG sing 555 n n 
C01 H17 VUG sing 556 n n 
C03 H18 VUG sing 557 n n 
C05 H19 VUG sing 558 n n 
C06 H20 VUG sing 559 n n 
C06 H21 VUG sing 560 n n 
C07 H22 VUG sing 561 n n 
C07 H23 VUG sing 562 n n 
C08 H24 VUG sing 563 n n 
C08 H25 VUG sing 564 n n 
C09 H26 VUG sing 565 n n 
C09 H27 VUG sing 566 n n 
C14 H28 VUG sing 567 n n 
C13 H29 VUG sing 568 n n 
#
_atom_sites.entry_id                     7K4B 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 VUG A 1 701 701 VUG CIS . 
F 3 Y01 A 1 702 801 Y01 Y01 . 
G 4 PCW A 1 703 804 PCW PCW . 
H 4 PCW A 1 704 805 PCW PCW . 
I 4 PCW A 1 705 809 PCW PCW . 
J 4 PCW A 1 706 810 PCW PCW . 
K 4 PCW A 1 707 813 PCW PCW . 
L 4 PCW A 1 708 814 PCW PCW . 
M 4 PCW A 1 709 815 PCW PCW . 
N 4 PCW A 1 710 806 PCW PCW . 
O 4 PCW A 1 711 811 PCW PCW . 
P 4 PCW A 1 712 812 PCW PCW . 
Q 2 VUG A 1 713 701 VUG CIS . 
R 3 Y01 A 1 714 803 Y01 Y01 . 
S 4 PCW A 1 715 807 PCW PCW . 
T 4 PCW A 1 716 808 PCW PCW . 
U 5 CA A 1 717 901 CA CA . 
V 3 Y01 B 1 701 803 Y01 Y01 . 
W 4 PCW B 1 702 807 PCW PCW . 
X 4 PCW B 1 703 808 PCW PCW . 
Y 2 VUG B 1 704 701 VUG CIS . 
Z 3 Y01 B 1 705 801 Y01 Y01 . 
AA 3 Y01 B 1 706 803 Y01 Y01 . 
BA 4 PCW B 1 707 804 PCW PCW . 
CA 4 PCW B 1 708 805 PCW PCW . 
DA 4 PCW B 1 709 809 PCW PCW . 
EA 4 PCW B 1 710 810 PCW PCW . 
FA 4 PCW B 1 711 813 PCW PCW . 
GA 4 PCW B 1 712 814 PCW PCW . 
HA 4 PCW B 1 713 815 PCW PCW . 
IA 4 PCW B 1 714 806 PCW PCW . 
JA 4 PCW B 1 715 811 PCW PCW . 
KA 4 PCW B 1 716 812 PCW PCW . 
LA 2 VUG B 1 717 701 VUG CIS . 
MA 4 PCW C 1 701 807 PCW PCW . 
NA 4 PCW C 1 702 808 PCW PCW . 
OA 2 VUG C 1 703 701 VUG CIS . 
PA 3 Y01 C 1 704 801 Y01 Y01 . 
QA 4 PCW C 1 705 804 PCW PCW . 
RA 4 PCW C 1 706 805 PCW PCW . 
SA 4 PCW C 1 707 809 PCW PCW . 
TA 4 PCW C 1 708 810 PCW PCW . 
UA 4 PCW C 1 709 813 PCW PCW . 
VA 4 PCW C 1 710 814 PCW PCW . 
WA 4 PCW C 1 711 815 PCW PCW . 
XA 4 PCW C 1 712 806 PCW PCW . 
YA 4 PCW C 1 713 811 PCW PCW . 
ZA 4 PCW C 1 714 812 PCW PCW . 
AB 4 PCW D 1 701 806 PCW PCW . 
BB 4 PCW D 1 702 811 PCW PCW . 
CB 4 PCW D 1 703 812 PCW PCW . 
DB 3 Y01 D 1 704 803 Y01 Y01 . 
EB 4 PCW D 1 705 807 PCW PCW . 
FB 4 PCW D 1 706 808 PCW PCW . 
GB 3 Y01 D 1 707 801 Y01 Y01 . 
HB 4 PCW D 1 708 804 PCW PCW . 
IB 4 PCW D 1 709 805 PCW PCW . 
JB 4 PCW D 1 710 809 PCW PCW . 
KB 4 PCW D 1 711 810 PCW PCW . 
LB 4 PCW D 1 712 813 PCW PCW . 
MB 4 PCW D 1 713 814 PCW PCW . 
NB 4 PCW D 1 714 815 PCW PCW . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C17 VUG . . . Y 2 96.386 85.189 82.508 1 63.64 ? C17 VUG 704 B 1 
HETATM 2 C C16 VUG . . . Y 2 96.79 85.127 83.836 1 63.64 ? C16 VUG 704 B 1 
HETATM 3 C C15 VUG . . . Y 2 95.879 85.362 84.831 1 63.64 ? C15 VUG 704 B 1 
HETATM 4 C C14 VUG . . . Y 2 97.745 85.434 86.505 1 63.64 ? C14 VUG 704 B 1 
HETATM 5 C C13 VUG . . . Y 2 98.171 85.372 87.987 1 63.64 ? C13 VUG 704 B 1 
HETATM 6 C C12 VUG . . . Y 2 95.599 86.144 87.162 1 63.64 ? C12 VUG 704 B 1 
HETATM 7 C C11 VUG . . . Y 2 96.007 85.947 88.651 1 63.64 ? C11 VUG 704 B 1 
HETATM 8 C C10 VUG . . . Y 2 97.55 85.416 90.169 1 63.64 ? C10 VUG 704 B 1 
HETATM 9 C C18 VUG . . . Y 2 95.044 85.509 82.232 1 63.64 ? C18 VUG 704 B 1 
HETATM 10 C C19 VUG . . . Y 2 94.555 85.683 84.486 1 63.64 ? C19 VUG 704 B 1 
HETATM 11 C C20 VUG . . . Y 2 97.726 84.588 95.138 1 63.64 ? C20 VUG 704 B 1 
HETATM 12 C C21 VUG . . . Y 2 98.09 84.228 96.432 1 63.64 ? C21 VUG 704 B 1 
HETATM 13 C C22 VUG . . . Y 2 99.399 84.396 96.846 1 63.64 ? C22 VUG 704 B 1 
HETATM 14 C C01 VUG . . . Y 2 101.816 85.115 96.422 1 63.64 ? C01 VUG 704 B 1 
HETATM 15 N N01 VUG . . . Y 2 97.142 85.203 88.875 1 63.64 ? N01 VUG 704 B 1 
HETATM 16 C C02 VUG . . . Y 2 100.359 84.928 95.957 1 63.64 ? C02 VUG 704 B 1 
HETATM 17 N N02 VUG . . . Y 2 96.306 85.297 86.25 1 63.64 ? N02 VUG 704 B 1 
HETATM 18 C C03 VUG . . . Y 2 100.008 85.283 94.672 1 63.64 ? C03 VUG 704 B 1 
HETATM 19 N N03 VUG . . . Y 2 94.201 85.74 83.196 1 63.64 ? N03 VUG 704 B 1 
HETATM 20 C C04 VUG . . . Y 2 98.686 85.115 94.263 1 63.64 ? C04 VUG 704 B 1 
HETATM 21 C C05 VUG . . . Y 2 98.283 85.505 92.845 1 63.64 ? C05 VUG 704 B 1 
HETATM 22 C C06 VUG . . . Y 2 99.408 85.099 91.897 1 63.64 ? C06 VUG 704 B 1 
HETATM 23 C C07 VUG . . . Y 2 98.874 84.68 90.502 1 63.64 ? C07 VUG 704 B 1 
HETATM 24 C C08 VUG . . . Y 2 96.916 84.79 92.562 1 63.64 ? C08 VUG 704 B 1 
HETATM 25 C C09 VUG . . . Y 2 96.434 84.92 91.118 1 63.64 ? C09 VUG 704 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           25 
#