data_7K4B # _model_server_result.job_id PaI7nbaGyzhFzhCBBLRjBg _model_server_result.datetime_utc '2024-11-23 01:14:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":717}' # _entry.id 7K4B # _exptl.entry_id 7K4B _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K4B _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id U _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 542 A ASP 542 1_555 U CA CA . A CA 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc2 U CA CA . A CA 717 1_555 B OD1 ASP 542 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? metalc ? metalc3 U CA CA . A CA 717 1_555 C OD1 ASP 542 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.099 ? metalc ? metalc4 U CA CA . A CA 717 1_555 D OD1 ASP 542 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7K4B _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 VUG A 1 701 701 VUG CIS . F 3 Y01 A 1 702 801 Y01 Y01 . G 4 PCW A 1 703 804 PCW PCW . H 4 PCW A 1 704 805 PCW PCW . I 4 PCW A 1 705 809 PCW PCW . J 4 PCW A 1 706 810 PCW PCW . K 4 PCW A 1 707 813 PCW PCW . L 4 PCW A 1 708 814 PCW PCW . M 4 PCW A 1 709 815 PCW PCW . N 4 PCW A 1 710 806 PCW PCW . O 4 PCW A 1 711 811 PCW PCW . P 4 PCW A 1 712 812 PCW PCW . Q 2 VUG A 1 713 701 VUG CIS . R 3 Y01 A 1 714 803 Y01 Y01 . S 4 PCW A 1 715 807 PCW PCW . T 4 PCW A 1 716 808 PCW PCW . U 5 CA A 1 717 901 CA CA . V 3 Y01 B 1 701 803 Y01 Y01 . W 4 PCW B 1 702 807 PCW PCW . X 4 PCW B 1 703 808 PCW PCW . Y 2 VUG B 1 704 701 VUG CIS . Z 3 Y01 B 1 705 801 Y01 Y01 . AA 3 Y01 B 1 706 803 Y01 Y01 . BA 4 PCW B 1 707 804 PCW PCW . CA 4 PCW B 1 708 805 PCW PCW . DA 4 PCW B 1 709 809 PCW PCW . EA 4 PCW B 1 710 810 PCW PCW . FA 4 PCW B 1 711 813 PCW PCW . GA 4 PCW B 1 712 814 PCW PCW . HA 4 PCW B 1 713 815 PCW PCW . IA 4 PCW B 1 714 806 PCW PCW . JA 4 PCW B 1 715 811 PCW PCW . KA 4 PCW B 1 716 812 PCW PCW . LA 2 VUG B 1 717 701 VUG CIS . MA 4 PCW C 1 701 807 PCW PCW . NA 4 PCW C 1 702 808 PCW PCW . OA 2 VUG C 1 703 701 VUG CIS . PA 3 Y01 C 1 704 801 Y01 Y01 . QA 4 PCW C 1 705 804 PCW PCW . RA 4 PCW C 1 706 805 PCW PCW . SA 4 PCW C 1 707 809 PCW PCW . TA 4 PCW C 1 708 810 PCW PCW . UA 4 PCW C 1 709 813 PCW PCW . VA 4 PCW C 1 710 814 PCW PCW . WA 4 PCW C 1 711 815 PCW PCW . XA 4 PCW C 1 712 806 PCW PCW . YA 4 PCW C 1 713 811 PCW PCW . ZA 4 PCW C 1 714 812 PCW PCW . AB 4 PCW D 1 701 806 PCW PCW . BB 4 PCW D 1 702 811 PCW PCW . CB 4 PCW D 1 703 812 PCW PCW . DB 3 Y01 D 1 704 803 Y01 Y01 . EB 4 PCW D 1 705 807 PCW PCW . FB 4 PCW D 1 706 808 PCW PCW . GB 3 Y01 D 1 707 801 Y01 Y01 . HB 4 PCW D 1 708 804 PCW PCW . IB 4 PCW D 1 709 805 PCW PCW . JB 4 PCW D 1 710 809 PCW PCW . KB 4 PCW D 1 711 810 PCW PCW . LB 4 PCW D 1 712 813 PCW PCW . MB 4 PCW D 1 713 814 PCW PCW . NB 4 PCW D 1 714 815 PCW PCW . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id U _atom_site.label_entity_id 5 _atom_site.Cartn_x 106.242 _atom_site.Cartn_y 106.24 _atom_site.Cartn_z 77.086 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 717 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #