data_7K4E # _model_server_result.job_id absz3ofS3i94yEOVrDkfhw _model_server_result.datetime_utc '2024-11-04 20:34:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7k4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":701}' # _entry.id 7K4E # _exptl.entry_id 7K4E _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 363.496 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "5-({4-[(1R,4S)-3'-methyl[1,2,3,4-tetrahydro[1,1'-biphenyl]]-4-yl]piperazin-1-yl}methyl)pyridin-2(1H)-one" _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7K4E _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C23 H29 N3 O' _chem_comp.formula_weight 363.496 _chem_comp.id VUJ _chem_comp.mon_nstd_flag . _chem_comp.name "5-({4-[(1R,4S)-3'-methyl[1,2,3,4-tetrahydro[1,1'-biphenyl]]-4-yl]piperazin-1-yl}methyl)pyridin-2(1H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C04 VUJ sing 374 n n N01 C01 VUJ sing 375 n n C04 C05 VUJ doub 376 n n O01 C01 VUJ doub 377 n n C01 C02 VUJ sing 378 n n C05 C06 VUJ sing 379 n n C05 C03 VUJ sing 380 n n C06 N02 VUJ sing 381 n n C02 C03 VUJ doub 382 n n C10 N02 VUJ sing 383 n n C10 C09 VUJ sing 384 n n N02 C07 VUJ sing 385 n n C07 C08 VUJ sing 386 n n C09 N03 VUJ sing 387 n n C08 N03 VUJ sing 388 n n N03 C11 VUJ sing 389 n n C11 C23 VUJ sing 390 n n C11 C12 VUJ sing 391 n n C23 C22 VUJ doub 392 n n C12 C13 VUJ sing 393 n n C22 C14 VUJ sing 394 n n C14 C13 VUJ sing 395 n n C14 C15 VUJ sing 396 n n C15 C21 VUJ doub 397 n y C15 C16 VUJ sing 398 n y C21 C19 VUJ sing 399 n y C16 C17 VUJ doub 400 n y C19 C20 VUJ sing 401 n n C19 C18 VUJ doub 402 n y C17 C18 VUJ sing 403 n y C10 H1 VUJ sing 404 n n C10 H2 VUJ sing 405 n n C13 H3 VUJ sing 406 n n C13 H4 VUJ sing 407 n n C17 H5 VUJ sing 408 n n C20 H6 VUJ sing 409 n n C20 H7 VUJ sing 410 n n C20 H8 VUJ sing 411 n n C21 H9 VUJ sing 412 n n C22 H10 VUJ sing 413 n n N01 H11 VUJ sing 414 n n C02 H12 VUJ sing 415 n n C03 H14 VUJ sing 416 n n C04 H16 VUJ sing 417 n n C06 H17 VUJ sing 418 n n C06 H18 VUJ sing 419 n n C07 H19 VUJ sing 420 n n C07 H20 VUJ sing 421 n n C08 H21 VUJ sing 422 n n C08 H22 VUJ sing 423 n n C09 H23 VUJ sing 424 n n C09 H24 VUJ sing 425 n n C11 H25 VUJ sing 426 n n C12 H26 VUJ sing 427 n n C12 H27 VUJ sing 428 n n C14 H28 VUJ sing 429 n n C16 H29 VUJ sing 430 n n C18 H30 VUJ sing 431 n n C23 H31 VUJ sing 432 n n # _atom_sites.entry_id 7K4E _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 VUJ A 1 701 701 VUJ LIG . F 2 VUJ B 1 701 701 VUJ LIG . G 2 VUJ B 1 702 701 VUJ LIG . H 2 VUJ C 1 701 701 VUJ LIG . I 2 VUJ D 1 701 701 VUJ LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 VUJ . . . E 2 100.373 131.429 101.489 1 417.82 ? C10 VUJ 701 A 1 HETATM 2 C C13 VUJ . . . E 2 100.532 130.736 107.791 1 417.82 ? C13 VUJ 701 A 1 HETATM 3 C C15 VUJ . . . E 2 100.33 128.572 109.051 1 417.82 ? C15 VUJ 701 A 1 HETATM 4 C C17 VUJ . . . E 2 99.236 128.54 111.255 1 417.82 ? C17 VUJ 701 A 1 HETATM 5 C C20 VUJ . . . E 2 100.986 125.181 110.785 1 417.82 ? C20 VUJ 701 A 1 HETATM 6 C C21 VUJ . . . E 2 100.814 127.166 109.34 1 417.82 ? C21 VUJ 701 A 1 HETATM 7 C C22 VUJ . . . E 2 99.804 128.61 106.636 1 417.82 ? C22 VUJ 701 A 1 HETATM 8 C C01 VUJ . . . E 2 102.497 137.224 100.338 1 417.82 ? C01 VUJ 701 A 1 HETATM 9 N N01 VUJ . . . E 2 103.528 136.292 100.207 1 417.82 ? N01 VUJ 701 A 1 HETATM 10 O O01 VUJ . . . E 2 102.781 138.591 100.297 1 417.82 ? O01 VUJ 701 A 1 HETATM 11 C C02 VUJ . . . E 2 101.102 136.759 100.52 1 417.82 ? C02 VUJ 701 A 1 HETATM 12 N N02 VUJ . . . E 2 101.108 132.542 101.647 1 417.82 ? N02 VUJ 701 A 1 HETATM 13 C C03 VUJ . . . E 2 100.816 135.389 100.56 1 417.82 ? C03 VUJ 701 A 1 HETATM 14 N N03 VUJ . . . E 2 100.396 131.489 104.045 1 417.82 ? N03 VUJ 701 A 1 HETATM 15 C C04 VUJ . . . E 2 103.229 134.88 100.245 1 417.82 ? C04 VUJ 701 A 1 HETATM 16 C C05 VUJ . . . E 2 101.876 134.424 100.431 1 417.82 ? C05 VUJ 701 A 1 HETATM 17 C C06 VUJ . . . E 2 101.555 132.929 100.47 1 417.82 ? C06 VUJ 701 A 1 HETATM 18 C C07 VUJ . . . E 2 102.119 132.372 102.46 1 417.82 ? C07 VUJ 701 A 1 HETATM 19 C C08 VUJ . . . E 2 101.654 132.187 103.891 1 417.82 ? C08 VUJ 701 A 1 HETATM 20 C C09 VUJ . . . E 2 99.922 130.762 102.845 1 417.82 ? C09 VUJ 701 A 1 HETATM 21 C C11 VUJ . . . E 2 100.59 130.637 105.234 1 417.82 ? C11 VUJ 701 A 1 HETATM 22 C C12 VUJ . . . E 2 100.266 131.479 106.468 1 417.82 ? C12 VUJ 701 A 1 HETATM 23 C C14 VUJ . . . E 2 100.703 129.222 107.71 1 417.82 ? C14 VUJ 701 A 1 HETATM 24 C C16 VUJ . . . E 2 99.599 129.206 109.929 1 417.82 ? C16 VUJ 701 A 1 HETATM 25 C C18 VUJ . . . E 2 99.658 127.325 111.506 1 417.82 ? C18 VUJ 701 A 1 HETATM 26 C C19 VUJ . . . E 2 100.5 126.591 110.486 1 417.82 ? C19 VUJ 701 A 1 HETATM 27 C C23 VUJ . . . E 2 99.743 129.374 105.303 1 417.82 ? C23 VUJ 701 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #