data_7K5B
#
_model_server_result.job_id            fEWFcpFJlqoMb9Qfx0Hq-A 
_model_server_result.datetime_utc      '2024-10-20 08:11:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7k5b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":4801}' 
#
_entry.id    7K5B 
#
_exptl.entry_id    7K5B 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          21 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7K5B 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7K5B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 21 V N N 
? 21 W N N 
? 21 X N N 
? 21 Y N N 
? 21 Z N N 
? 21 AA N N 
? 21 FA N N 
? 21 GA N N 
? 21 HA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 N SG CYS 65 N CYS 68 1_555 O SG CYS 89 O CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc1 A OG SER 2160 A SER 2164 1_555 V MG MG . A MG 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc2 S O1B ADP . A ADP 4701 1_555 W MG MG . A MG 5002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? 
metalc ? metalc3 S O3A ADP . A ADP 4701 1_555 W MG MG . A MG 5002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc4 T O3G ATP . A ATP 4801 1_555 V MG MG . A MG 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc5 T O1B ATP . A ATP 4801 1_555 V MG MG . A MG 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc6 T O3B ATP . A ATP 4801 1_555 V MG MG . A MG 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? 
metalc ? metalc7 U O1B ADP . A ADP 4901 1_555 X MG MG . A MG 5101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? 
metalc ? metalc8 U O5' ADP . A ADP 4901 1_555 X MG MG . A MG 5101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? 
metalc ? metalc9 B OG1 THR 2545 B THR 2545 1_555 Z MG MG . B MG 5101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? 
metalc ? metalc10 Y MG MG . B MG 4801 1_555 CA O2G ATP . B ATP 5601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc11 Y MG MG . B MG 4801 1_555 CA O3B ATP . B ATP 5601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? 
metalc ? metalc12 Y MG MG . B MG 4801 1_555 CA O2A ATP . B ATP 5601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc13 Z MG MG . B MG 5101 1_555 BA O2B ADP . B ADP 5501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc14 Z MG MG . B MG 5101 1_555 BA O3A ADP . B ADP 5501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? 
metalc ? metalc15 AA MG MG . B MG 5401 1_555 DA O1B ADP . B ADP 5602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? 
metalc ? metalc16 AA MG MG . B MG 5401 1_555 DA O1A ADP . B ADP 5602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
metalc ? metalc17 AA MG MG . B MG 5401 1_555 DA O5' ADP . B ADP 5602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? 
metalc ? metalc18 C OG SER 1574 C SER 1691 1_555 FA MG MG . C MG 4301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc19 C OG1 THR 1900 C THR 2017 1_555 GA MG MG . C MG 4501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? 
metalc ? metalc20 EA O3G ATP . C ATP 4201 1_555 FA MG MG . C MG 4301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? 
metalc ? metalc21 EA O1B ATP . C ATP 4201 1_555 FA MG MG . C MG 4301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc22 EA O2A ATP . C ATP 4201 1_555 FA MG MG . C MG 4301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc23 GA MG MG . C MG 4501 1_555 IA O1A ADP . C ADP 4702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? 
metalc ? metalc24 GA MG MG . C MG 4501 1_555 IA O2B ADP . C ADP 4702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.926 ? 
metalc ? metalc25 HA MG MG . C MG 4701 1_555 JA O2A ADP . C ADP 4703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
metalc ? metalc26 HA MG MG . C MG 4701 1_555 JA O3A ADP . C ADP 4703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7K5B 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 19 ADP A 1 4701 4701 ADP ADP . 
T 20 ATP A 1 4801 4801 ATP ATP . 
U 19 ADP A 1 4901 4901 ADP ADP . 
V 21 MG A 1 5001 5001 MG MG . 
W 21 MG A 1 5002 5002 MG MG . 
X 21 MG A 1 5101 5101 MG MG . 
Y 21 MG B 1 4801 4801 MG MG . 
Z 21 MG B 1 5101 5101 MG MG . 
AA 21 MG B 1 5401 5401 MG MG . 
BA 19 ADP B 1 5501 5501 ADP ADP . 
CA 20 ATP B 1 5601 5601 ATP ATP . 
DA 19 ADP B 1 5602 5602 ADP ADP . 
EA 20 ATP C 1 4201 4201 ATP ATP . 
FA 21 MG C 1 4301 4301 MG MG . 
GA 21 MG C 1 4501 4501 MG MG . 
HA 21 MG C 1 4701 4701 MG MG . 
IA 19 ADP C 1 4702 4702 ADP ADP . 
JA 19 ADP C 1 4703 4703 ADP ADP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         Y 
_atom_site.label_entity_id       21 
_atom_site.Cartn_x               289.357 
_atom_site.Cartn_y               202.065 
_atom_site.Cartn_z               165.111 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        317.45 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           4801 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              107 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    139 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#