data_7K6A
#
_model_server_result.job_id            DcsvpssaHx3PpYwTGynUQw 
_model_server_result.datetime_utc      '2024-10-19 07:35:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7k6a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":205}' 
#
_entry.id    7K6A 
#
_exptl.entry_id    7K6A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.8 
_cell.angle_gamma         90 
_cell.entry_id            7K6A 
_cell.length_a            28.87 
_cell.length_b            66.65 
_cell.length_c            44.29 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7K6A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7K6A 
_atom_sites.fract_transf_matrix[1][1]    0.034638 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001089 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015004 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02259 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 201 200 NAP NAP . 
C 3 VYG A 1 202 201 VYG 575 . 
D 4 CL A 1 203 202 CL CL . 
E 5 EDO A 1 204 301 EDO EDO . 
F 5 EDO A 1 205 302 EDO EDO . 
G 5 EDO A 1 206 303 EDO EDO . 
H 6 HOH A 1 301 72 HOH HOH . 
H 6 HOH A 2 302 90 HOH HOH . 
H 6 HOH A 3 303 198 HOH HOH . 
H 6 HOH A 4 304 272 HOH HOH . 
H 6 HOH A 5 305 66 HOH HOH . 
H 6 HOH A 6 306 79 HOH HOH . 
H 6 HOH A 7 307 144 HOH HOH . 
H 6 HOH A 8 308 201 HOH HOH . 
H 6 HOH A 9 309 216 HOH HOH . 
H 6 HOH A 10 310 157 HOH HOH . 
H 6 HOH A 11 311 19 HOH HOH . 
H 6 HOH A 12 312 115 HOH HOH . 
H 6 HOH A 13 313 256 HOH HOH . 
H 6 HOH A 14 314 191 HOH HOH . 
H 6 HOH A 15 315 105 HOH HOH . 
H 6 HOH A 16 316 263 HOH HOH . 
H 6 HOH A 17 317 51 HOH HOH . 
H 6 HOH A 18 318 68 HOH HOH . 
H 6 HOH A 19 319 149 HOH HOH . 
H 6 HOH A 20 320 38 HOH HOH . 
H 6 HOH A 21 321 65 HOH HOH . 
H 6 HOH A 22 322 60 HOH HOH . 
H 6 HOH A 23 323 267 HOH HOH . 
H 6 HOH A 24 324 253 HOH HOH . 
H 6 HOH A 25 325 269 HOH HOH . 
H 6 HOH A 26 326 225 HOH HOH . 
H 6 HOH A 27 327 78 HOH HOH . 
H 6 HOH A 28 328 24 HOH HOH . 
H 6 HOH A 29 329 102 HOH HOH . 
H 6 HOH A 30 330 40 HOH HOH . 
H 6 HOH A 31 331 46 HOH HOH . 
H 6 HOH A 32 332 180 HOH HOH . 
H 6 HOH A 33 333 32 HOH HOH . 
H 6 HOH A 34 334 223 HOH HOH . 
H 6 HOH A 35 335 13 HOH HOH . 
H 6 HOH A 36 336 251 HOH HOH . 
H 6 HOH A 37 337 89 HOH HOH . 
H 6 HOH A 38 338 174 HOH HOH . 
H 6 HOH A 39 339 106 HOH HOH . 
H 6 HOH A 40 340 37 HOH HOH . 
H 6 HOH A 41 341 49 HOH HOH . 
H 6 HOH A 42 342 138 HOH HOH . 
H 6 HOH A 43 343 33 HOH HOH . 
H 6 HOH A 44 344 233 HOH HOH . 
H 6 HOH A 45 345 43 HOH HOH . 
H 6 HOH A 46 346 25 HOH HOH . 
H 6 HOH A 47 347 22 HOH HOH . 
H 6 HOH A 48 348 95 HOH HOH . 
H 6 HOH A 49 349 254 HOH HOH . 
H 6 HOH A 50 350 74 HOH HOH . 
H 6 HOH A 51 351 160 HOH HOH . 
H 6 HOH A 52 352 12 HOH HOH . 
H 6 HOH A 53 353 235 HOH HOH . 
H 6 HOH A 54 354 16 HOH HOH . 
H 6 HOH A 55 355 127 HOH HOH . 
H 6 HOH A 56 356 215 HOH HOH . 
H 6 HOH A 57 357 108 HOH HOH . 
H 6 HOH A 58 358 29 HOH HOH . 
H 6 HOH A 59 359 94 HOH HOH . 
H 6 HOH A 60 360 55 HOH HOH . 
H 6 HOH A 61 361 39 HOH HOH . 
H 6 HOH A 62 362 134 HOH HOH . 
H 6 HOH A 63 363 9 HOH HOH . 
H 6 HOH A 64 364 59 HOH HOH . 
H 6 HOH A 65 365 8 HOH HOH . 
H 6 HOH A 66 366 162 HOH HOH . 
H 6 HOH A 67 367 31 HOH HOH . 
H 6 HOH A 68 368 121 HOH HOH . 
H 6 HOH A 69 369 208 HOH HOH . 
H 6 HOH A 70 370 264 HOH HOH . 
H 6 HOH A 71 371 244 HOH HOH . 
H 6 HOH A 72 372 10 HOH HOH . 
H 6 HOH A 73 373 67 HOH HOH . 
H 6 HOH A 74 374 129 HOH HOH . 
H 6 HOH A 75 375 93 HOH HOH . 
H 6 HOH A 76 376 154 HOH HOH . 
H 6 HOH A 77 377 273 HOH HOH . 
H 6 HOH A 78 378 229 HOH HOH . 
H 6 HOH A 79 379 41 HOH HOH . 
H 6 HOH A 80 380 57 HOH HOH . 
H 6 HOH A 81 381 133 HOH HOH . 
H 6 HOH A 82 382 150 HOH HOH . 
H 6 HOH A 83 383 30 HOH HOH . 
H 6 HOH A 84 384 63 HOH HOH . 
H 6 HOH A 85 385 239 HOH HOH . 
H 6 HOH A 86 386 69 HOH HOH . 
H 6 HOH A 87 387 28 HOH HOH . 
H 6 HOH A 88 388 21 HOH HOH . 
H 6 HOH A 89 389 18 HOH HOH . 
H 6 HOH A 90 390 73 HOH HOH . 
H 6 HOH A 91 391 147 HOH HOH . 
H 6 HOH A 92 392 45 HOH HOH . 
H 6 HOH A 93 393 250 HOH HOH . 
H 6 HOH A 94 394 111 HOH HOH . 
H 6 HOH A 95 395 34 HOH HOH . 
H 6 HOH A 96 396 214 HOH HOH . 
H 6 HOH A 97 397 70 HOH HOH . 
H 6 HOH A 98 398 99 HOH HOH . 
H 6 HOH A 99 399 54 HOH HOH . 
H 6 HOH A 100 400 189 HOH HOH . 
H 6 HOH A 101 401 6 HOH HOH . 
H 6 HOH A 102 402 47 HOH HOH . 
H 6 HOH A 103 403 20 HOH HOH . 
H 6 HOH A 104 404 53 HOH HOH . 
H 6 HOH A 105 405 11 HOH HOH . 
H 6 HOH A 106 406 252 HOH HOH . 
H 6 HOH A 107 407 203 HOH HOH . 
H 6 HOH A 108 408 50 HOH HOH . 
H 6 HOH A 109 409 173 HOH HOH . 
H 6 HOH A 110 410 17 HOH HOH . 
H 6 HOH A 111 411 188 HOH HOH . 
H 6 HOH A 112 412 107 HOH HOH . 
H 6 HOH A 113 413 27 HOH HOH . 
H 6 HOH A 114 414 228 HOH HOH . 
H 6 HOH A 115 415 56 HOH HOH . 
H 6 HOH A 116 416 109 HOH HOH . 
H 6 HOH A 117 417 91 HOH HOH . 
H 6 HOH A 118 418 92 HOH HOH . 
H 6 HOH A 119 419 103 HOH HOH . 
H 6 HOH A 120 420 36 HOH HOH . 
H 6 HOH A 121 421 75 HOH HOH . 
H 6 HOH A 122 422 153 HOH HOH . 
H 6 HOH A 123 423 193 HOH HOH . 
H 6 HOH A 124 424 96 HOH HOH . 
H 6 HOH A 125 425 71 HOH HOH . 
H 6 HOH A 126 426 232 HOH HOH . 
H 6 HOH A 127 427 42 HOH HOH . 
H 6 HOH A 128 428 98 HOH HOH . 
H 6 HOH A 129 429 112 HOH HOH . 
H 6 HOH A 130 430 275 HOH HOH . 
H 6 HOH A 131 431 197 HOH HOH . 
H 6 HOH A 132 432 83 HOH HOH . 
H 6 HOH A 133 433 61 HOH HOH . 
H 6 HOH A 134 434 158 HOH HOH . 
H 6 HOH A 135 435 227 HOH HOH . 
H 6 HOH A 136 436 48 HOH HOH . 
H 6 HOH A 137 437 186 HOH HOH . 
H 6 HOH A 138 438 132 HOH HOH . 
H 6 HOH A 139 439 114 HOH HOH . 
H 6 HOH A 140 440 100 HOH HOH . 
H 6 HOH A 141 441 159 HOH HOH . 
H 6 HOH A 142 442 84 HOH HOH . 
H 6 HOH A 143 443 169 HOH HOH . 
H 6 HOH A 144 444 226 HOH HOH . 
H 6 HOH A 145 445 97 HOH HOH . 
H 6 HOH A 146 446 224 HOH HOH . 
H 6 HOH A 147 447 110 HOH HOH . 
H 6 HOH A 148 448 271 HOH HOH . 
H 6 HOH A 149 449 113 HOH HOH . 
H 6 HOH A 150 450 176 HOH HOH . 
H 6 HOH A 151 451 240 HOH HOH . 
H 6 HOH A 152 452 143 HOH HOH . 
H 6 HOH A 153 453 164 HOH HOH . 
H 6 HOH A 154 454 248 HOH HOH . 
H 6 HOH A 155 455 172 HOH HOH . 
H 6 HOH A 156 456 205 HOH HOH . 
H 6 HOH A 157 457 218 HOH HOH . 
H 6 HOH A 158 458 270 HOH HOH . 
H 6 HOH A 159 459 204 HOH HOH . 
H 6 HOH A 160 460 236 HOH HOH . 
H 6 HOH A 161 461 199 HOH HOH . 
H 6 HOH A 162 462 234 HOH HOH . 
H 6 HOH A 163 463 123 HOH HOH . 
H 6 HOH A 164 464 238 HOH HOH . 
H 6 HOH A 165 465 262 HOH HOH . 
H 6 HOH A 166 466 128 HOH HOH . 
H 6 HOH A 167 467 217 HOH HOH . 
H 6 HOH A 168 468 259 HOH HOH . 
H 6 HOH A 169 469 116 HOH HOH . 
H 6 HOH A 170 470 207 HOH HOH . 
H 6 HOH A 171 471 139 HOH HOH . 
H 6 HOH A 172 472 156 HOH HOH . 
H 6 HOH A 173 473 185 HOH HOH . 
H 6 HOH A 174 474 242 HOH HOH . 
H 6 HOH A 175 475 213 HOH HOH . 
H 6 HOH A 176 476 183 HOH HOH . 
H 6 HOH A 177 477 245 HOH HOH . 
H 6 HOH A 178 478 274 HOH HOH . 
H 6 HOH A 179 479 76 HOH HOH . 
H 6 HOH A 180 480 168 HOH HOH . 
H 6 HOH A 181 481 155 HOH HOH . 
H 6 HOH A 182 482 171 HOH HOH . 
H 6 HOH A 183 483 222 HOH HOH . 
H 6 HOH A 184 484 44 HOH HOH . 
H 6 HOH A 185 485 219 HOH HOH . 
H 6 HOH A 186 486 243 HOH HOH . 
H 6 HOH A 187 487 220 HOH HOH . 
H 6 HOH A 188 488 148 HOH HOH . 
H 6 HOH A 189 489 202 HOH HOH . 
H 6 HOH A 190 490 187 HOH HOH . 
H 6 HOH A 191 491 231 HOH HOH . 
H 6 HOH A 192 492 131 HOH HOH . 
H 6 HOH A 193 493 255 HOH HOH . 
H 6 HOH A 194 494 257 HOH HOH . 
H 6 HOH A 195 495 124 HOH HOH . 
H 6 HOH A 196 496 80 HOH HOH . 
H 6 HOH A 197 497 118 HOH HOH . 
H 6 HOH A 198 498 258 HOH HOH . 
H 6 HOH A 199 499 261 HOH HOH . 
H 6 HOH A 200 500 276 HOH HOH . 
H 6 HOH A 201 501 260 HOH HOH . 
H 6 HOH A 202 502 177 HOH HOH . 
H 6 HOH A 203 503 182 HOH HOH . 
H 6 HOH A 204 504 161 HOH HOH . 
H 6 HOH A 205 505 237 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 5 11.347 -6.766 18.762 1 24.66 ? C1 EDO 205 A 1 
HETATM 2 O O1 EDO . . . F 5 10.274 -7.198 17.907 1 23.11 ? O1 EDO 205 A 1 
HETATM 3 C C2 EDO . . . F 5 10.863 -5.587 19.602 1 20.56 ? C2 EDO 205 A 1 
HETATM 4 O O2 EDO . . . F 5 9.652 -5.947 20.29 1 16.66 ? O2 EDO 205 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#